RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 PRG4Q92954 1404 aaPredicted RBP32.52■■■□□ 2.8
CLN6-221ENST00000637494 RUSC2Q8N2Y8 1516 aa32.51■■■□□ 2.8
CLN6-221ENST00000637494 CARMIL1Q5VZK9 1371 aa32.46■■■□□ 2.79
CLN6-221ENST00000637494 KIAA0586Q9BVV6 1533 aa32.43■■■□□ 2.78
CLN6-221ENST00000637494 RAPGEF2Q9Y4G8 1499 aa32.22■■■□□ 2.75
CLN6-221ENST00000637494 NPM1P06748 294 aaKnown RBP eCLIP32.21■■■□□ 2.75
CLN6-221ENST00000637494 CARMIL2Q6F5E8 1435 aa32.18■■■□□ 2.74
CLN6-221ENST00000637494 IQGAP2Q13576 1575 aa32.18■■■□□ 2.74
CLN6-221ENST00000637494 PTPRGP23470 1445 aa32.09■■■□□ 2.73
CLN6-221ENST00000637494 TNIKQ9UKE5 1360 aa32.07■■■□□ 2.72
CLN6-221ENST00000637494 TTBK1Q5TCY1 1321 aaPredicted RBP32.05■■■□□ 2.72
CLN6-221ENST00000637494 ADCY10Q96PN6 1610 aa32.05■■■□□ 2.72
CLN6-221ENST00000637494 MAPKBP1O60336 1514 aa31.98■■■□□ 2.71
CLN6-221ENST00000637494 UGGT2Q9NYU1 1516 aa31.95■■■□□ 2.71
CLN6-221ENST00000637494 DISP1Q96F81 1524 aa31.94■■■□□ 2.7
CLN6-221ENST00000637494 KIF13AQ9H1H9 1805 aa31.93■■■□□ 2.7
CLN6-221ENST00000637494 CTTNBP2Q8WZ74 1663 aa31.92■■■□□ 2.7
CLN6-221ENST00000637494 ABCC10Q5T3U5 1492 aa31.91■■■□□ 2.7
CLN6-221ENST00000637494 PRXQ9BXM0 1461 aa31.91■■■□□ 2.7
CLN6-221ENST00000637494 FAM69CQ0P6D2 419 aa31.91■■■□□ 2.7
CLN6-221ENST00000637494 KIAA0556O60303 1618 aa31.86■■■□□ 2.69
CLN6-221ENST00000637494 ABCC2Q92887 1545 aa31.85■■■□□ 2.69
CLN6-221ENST00000637494 UACAQ9BZF9 1416 aa31.84■■■□□ 2.69
CLN6-221ENST00000637494 CSRNP3Q8WYN3 585 aa31.83■■■□□ 2.69
CLN6-221ENST00000637494 UHRF1BP1LA0JNW5 1464 aa31.83■■■□□ 2.69
CLN6-221ENST00000637494 GOLGA3Q08378 1498 aa31.83■■■□□ 2.69
CLN6-221ENST00000637494 DIP2BQ9P265 1576 aa31.82■■■□□ 2.68
CLN6-221ENST00000637494 EEA1Q15075 1411 aa31.8■■■□□ 2.68
CLN6-221ENST00000637494 FAM9AQ8IZU1 332 aaPredicted RBP31.72■■■□□ 2.67
CLN6-221ENST00000637494 PLB1Q6P1J6 1458 aa31.72■■■□□ 2.67
CLN6-221ENST00000637494 ASXL2Q76L83 1435 aa31.7■■■□□ 2.67
CLN6-221ENST00000637494 KDM5BQ9UGL1 1544 aa31.66■■■□□ 2.66
CLN6-221ENST00000637494 ZCCHC11Q5TAX3 1644 aaKnown RBP31.6■■■□□ 2.65
CLN6-221ENST00000637494 TSPOAP1O95153 1857 aa31.59■■■□□ 2.65
CLN6-221ENST00000637494 GLI2P10070 1586 aa31.56■■■□□ 2.64
CLN6-221ENST00000637494 ABCA8O94911 1581 aa31.52■■■□□ 2.64
CLN6-221ENST00000637494 P3H3Q8IVL6 736 aa31.52■■■□□ 2.64
CLN6-221ENST00000637494 CHIC1Q5VXU3 224 aa31.51■■■□□ 2.63
CLN6-221ENST00000637494 KDM6BO15054 1643 aa31.5■■■□□ 2.63
CLN6-221ENST00000637494 EPRSP07814 1512 aaKnown RBP31.49■■■□□ 2.63
CLN6-221ENST00000637494 AEBP2Q6ZN18 517 aaPredicted RBP31.49■■■□□ 2.63
CLN6-221ENST00000637494 WDR7Q9Y4E6 1490 aa31.46■■■□□ 2.63
CLN6-221ENST00000637494 KIF21BO75037 1637 aa31.46■■■□□ 2.63
CLN6-221ENST00000637494 SAMD9Q5K651 1589 aa31.45■■■□□ 2.63
CLN6-221ENST00000637494 RANGAP1P46060 587 aaPredicted RBP31.42■■■□□ 2.62
CLN6-221ENST00000637494 MAP3K4Q9Y6R4 1608 aa31.38■■■□□ 2.61
CLN6-221ENST00000637494 TEX14Q8IWB6 1497 aa31.37■■■□□ 2.61
CLN6-221ENST00000637494 PPRC1Q5VV67 1664 aaKnown RBP31.35■■■□□ 2.61
CLN6-221ENST00000637494 KCNH8Q96L42 1107 aa31.35■■■□□ 2.61
CLN6-221ENST00000637494 ARID3CA6NKF2 412 aa31.31■■■□□ 2.6
CLN6-221ENST00000637494 RAPGEF6Q8TEU7 1601 aa31.3■■■□□ 2.6
CLN6-221ENST00000637494 UBTFP17480 764 aaKnown RBP31.29■■■□□ 2.6
CLN6-221ENST00000637494 EFCAB5A4FU69 1503 aa31.28■■■□□ 2.6
CLN6-221ENST00000637494 ATP10BO94823 1461 aa31.27■■■□□ 2.6
CLN6-221ENST00000637494 FHOD3Q2V2M9 1422 aa31.26■■■□□ 2.6
CLN6-221ENST00000637494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.26■■■□□ 2.59
CLN6-221ENST00000637494 HNRNPUL2Q1KMD3 747 aaKnown RBP31.26■■■□□ 2.59
CLN6-221ENST00000637494 EHMT2Q96KQ7 1210 aa31.26■■■□□ 2.59
CLN6-221ENST00000637494 CFAP43Q8NDM7 1665 aa31.25■■■□□ 2.59
CLN6-221ENST00000637494 CD109Q6YHK3 1445 aa31.25■■■□□ 2.59
CLN6-221ENST00000637494 MAGI3Q5TCQ9 1506 aa31.18■■■□□ 2.58
CLN6-221ENST00000637494 NUP153P49790 1475 aaKnown RBP31.14■■■□□ 2.57
CLN6-221ENST00000637494 COL17A1Q9UMD9 1497 aaPredicted RBP31.1■■■□□ 2.57
CLN6-221ENST00000637494 PLEKHD1A6NEE1 506 aa31.06■■■□□ 2.56
CLN6-221ENST00000637494 ABCA9Q8IUA7 1624 aa31.05■■■□□ 2.56
CLN6-221ENST00000637494 FMN1Q68DA7 1419 aa31.02■■■□□ 2.56
CLN6-221ENST00000637494 PHLDB1Q86UU1 1377 aa30.98■■■□□ 2.55
CLN6-221ENST00000637494 ARHGAP35Q9NRY4 1499 aa30.97■■■□□ 2.55
CLN6-221ENST00000637494 ATP1B4Q9UN42 357 aaPredicted RBP30.97■■■□□ 2.55
CLN6-221ENST00000637494 KDM4FA0A1W2PPD8 638 aa30.95■■■□□ 2.55
CLN6-221ENST00000637494 ARAP3Q8WWN8 1544 aa30.93■■■□□ 2.54
CLN6-221ENST00000637494 HECW1Q76N89 1606 aa30.92■■■□□ 2.54
CLN6-221ENST00000637494 NEO1Q92859 1461 aa30.89■■■□□ 2.54
CLN6-221ENST00000637494 CDK13Q14004 1512 aaKnown RBP30.88■■■□□ 2.53
CLN6-221ENST00000637494 CDK11AQ9UQ88 783 aaPredicted RBP30.86■■■□□ 2.53
CLN6-221ENST00000637494 ADGRL1O94910 1474 aa30.85■■■□□ 2.53
CLN6-221ENST00000637494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.8■■■□□ 2.522e-6■■■■□ 19.9
CLN6-221ENST00000637494 CFAP74Q9C0B2 1584 aa30.78■■■□□ 2.52
CLN6-221ENST00000637494 RAPGEF3O95398 923 aa30.75■■■□□ 2.51
CLN6-221ENST00000637494 TTC37Q6PGP7 1564 aa30.75■■■□□ 2.51
CLN6-221ENST00000637494 FANCAO15360 1455 aa30.74■■■□□ 2.51
CLN6-221ENST00000637494 AKNAQ7Z591 1439 aa30.72■■■□□ 2.51
CLN6-221ENST00000637494 CLIP1P30622 1438 aa30.7■■■□□ 2.5
CLN6-221ENST00000637494 DENND4BO75064 1496 aaPredicted RBP30.7■■■□□ 2.5
CLN6-221ENST00000637494 CASKIN1Q8WXD9 1431 aa30.67■■■□□ 2.5
CLN6-221ENST00000637494 CCDC18Q5T9S5 1454 aa30.66■■■□□ 2.5
CLN6-221ENST00000637494 KIF14Q15058 1648 aa30.65■■■□□ 2.5
CLN6-221ENST00000637494 TROQ12816 1431 aaPredicted RBP30.65■■■□□ 2.5
CLN6-221ENST00000637494 PLCH2O75038 1416 aa30.64■■■□□ 2.5
CLN6-221ENST00000637494 PCF11O94913 1555 aaKnown RBP30.64■■■□□ 2.5
CLN6-221ENST00000637494 FRMPD1Q5SYB0 1578 aa30.62■■■□□ 2.49
CLN6-221ENST00000637494 MYO5CQ9NQX4 1742 aa30.6■■■□□ 2.49
CLN6-221ENST00000637494 LRRIQ1Q96JM4 1722 aa30.59■■■□□ 2.49
CLN6-221ENST00000637494 FYCO1Q9BQS8 1478 aa30.59■■■□□ 2.49
CLN6-221ENST00000637494 EFCAB2Q5VUJ9 269 aa30.59■■■□□ 2.49
CLN6-221ENST00000637494 RICTORQ6R327 1708 aa30.57■■■□□ 2.48
CLN6-221ENST00000637494 ARID4BQ4LE39 1312 aaPredicted RBP30.54■■■□□ 2.48
CLN6-221ENST00000637494 SCAPERQ9BY12 1400 aa30.54■■■□□ 2.48
CLN6-221ENST00000637494 ARHGAP5Q13017 1502 aa30.51■■■□□ 2.47
CLN6-221ENST00000637494 ARHGEF40Q8TER5 1519 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms