RNA–Protein interactions for RNA: ENST00000636987.1

ARHGEF4-218, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 2

Gene ARHGEF4, Length 3,656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-218ENST00000636987 RUSC2Q8N2Y8 1516 aa14.62□□□□□ -0.07
ARHGEF4-218ENST00000636987 TOP2BQ02880 1626 aa14.62□□□□□ -0.07
ARHGEF4-218ENST00000636987 TSHZ2Q9NRE2 1034 aa14.61□□□□□ -0.07
ARHGEF4-218ENST00000636987 SALL2Q9Y467 1007 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF4-218ENST00000636987 FKBP8Q14318 412 aa14.56□□□□□ -0.08
ARHGEF4-218ENST00000636987 KIF27Q86VH2 1401 aa14.56□□□□□ -0.08
ARHGEF4-218ENST00000636987 AQRO60306 1485 aaKnown RBP eCLIP14.56□□□□□ -0.08
ARHGEF4-218ENST00000636987 WDR62O43379 1518 aa14.52□□□□□ -0.08
ARHGEF4-218ENST00000636987 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.09
ARHGEF4-218ENST00000636987 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
ARHGEF4-218ENST00000636987 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
ARHGEF4-218ENST00000636987 ITGAEP38570 1179 aa14.51□□□□□ -0.09
ARHGEF4-218ENST00000636987 PODXL2Q9NZ53 605 aa14.5□□□□□ -0.09
ARHGEF4-218ENST00000636987 CLSPNQ9HAW4 1339 aa14.49□□□□□ -0.09
ARHGEF4-218ENST00000636987 IFT140Q96RY7 1462 aa14.47□□□□□ -0.09
ARHGEF4-218ENST00000636987 CHMP7Q8WUX9 453 aaPredicted RBP14.46□□□□□ -0.09
ARHGEF4-218ENST00000636987 GAPVD1Q14C86 1478 aa14.46□□□□□ -0.09
ARHGEF4-218ENST00000636987 UBE2Q2Q8WVN8 375 aa14.45□□□□□ -0.1
ARHGEF4-218ENST00000636987 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF4-218ENST00000636987 ABCA10Q8WWZ4 1543 aa14.43□□□□□ -0.1
ARHGEF4-218ENST00000636987 IGF1RP08069 1367 aa14.43□□□□□ -0.1
ARHGEF4-218ENST00000636987 CARMIL1Q5VZK9 1371 aa14.42□□□□□ -0.1
ARHGEF4-218ENST00000636987 EEA1Q15075 1411 aa14.41□□□□□ -0.1
ARHGEF4-218ENST00000636987 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
ARHGEF4-218ENST00000636987 RBM19Q9Y4C8 960 aaKnown RBP14.37□□□□□ -0.11
ARHGEF4-218ENST00000636987 TRIM52Q96A61 297 aa14.36□□□□□ -0.11
ARHGEF4-218ENST00000636987 PKNOX2Q96KN3 472 aa14.36□□□□□ -0.11
ARHGEF4-218ENST00000636987 CEP162Q5TB80 1403 aa14.36□□□□□ -0.11
ARHGEF4-218ENST00000636987 GRIN2BQ13224 1484 aa14.35□□□□□ -0.11
ARHGEF4-218ENST00000636987 RAPGEF2Q9Y4G8 1499 aa14.35□□□□□ -0.11
ARHGEF4-218ENST00000636987 P3H3Q8IVL6 736 aa14.35□□□□□ -0.11
ARHGEF4-218ENST00000636987 SNAPC4Q5SXM2 1469 aa14.33□□□□□ -0.12
ARHGEF4-218ENST00000636987 KCNH8Q96L42 1107 aa14.33□□□□□ -0.12
ARHGEF4-218ENST00000636987 EIF4G3O43432 1585 aaKnown RBP14.32□□□□□ -0.12
ARHGEF4-218ENST00000636987 DDX10Q13206 875 aaKnown RBP14.3□□□□□ -0.12
ARHGEF4-218ENST00000636987 GOLGA3Q08378 1498 aa14.3□□□□□ -0.12
ARHGEF4-218ENST00000636987 ATP1B4Q9UN42 357 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF4-218ENST00000636987 IRX6P78412 446 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF4-218ENST00000636987 CDK11AQ9UQ88 783 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF4-218ENST00000636987 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
ARHGEF4-218ENST00000636987 ABCA5Q8WWZ7 1642 aa14.25□□□□□ -0.13
ARHGEF4-218ENST00000636987 PRXQ9BXM0 1461 aa14.25□□□□□ -0.13
ARHGEF4-218ENST00000636987 NBR1Q14596 966 aa14.24□□□□□ -0.13
ARHGEF4-218ENST00000636987 ERICH3Q5RHP9 1530 aa14.23□□□□□ -0.13
ARHGEF4-218ENST00000636987 HIRIP3Q9BW71 556 aaPredicted RBP14.23□□□□□ -0.13
ARHGEF4-218ENST00000636987 WDR97A6NE52 1622 aa14.23□□□□□ -0.13
ARHGEF4-218ENST00000636987 TNIKQ9UKE5 1360 aa14.22□□□□□ -0.13
ARHGEF4-218ENST00000636987 MAGI1Q96QZ7 1491 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF4-218ENST00000636987 RTN4Q9NQC3 1192 aaKnown RBP14.19□□□□□ -0.14
ARHGEF4-218ENST00000636987 PBRM1Q86U86 1689 aa14.19□□□□□ -0.14
ARHGEF4-218ENST00000636987 ARID3CA6NKF2 412 aa14.19□□□□□ -0.14
ARHGEF4-218ENST00000636987 SYNJ2O15056 1496 aa14.19□□□□□ -0.14
ARHGEF4-218ENST00000636987 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
ARHGEF4-218ENST00000636987 ANP32CO43423 234 aa14.18□□□□□ -0.14
ARHGEF4-218ENST00000636987 GRIN2AQ12879 1464 aa14.16□□□□□ -0.14
ARHGEF4-218ENST00000636987 MSH5O43196 834 aa14.16□□□□□ -0.14
ARHGEF4-218ENST00000636987 CLIP1P30622 1438 aa14.16□□□□□ -0.14
ARHGEF4-218ENST00000636987 RTL5Q5HYW3 569 aaPredicted RBP14.15□□□□□ -0.14
ARHGEF4-218ENST00000636987 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
ARHGEF4-218ENST00000636987 KIF21BO75037 1637 aa14.15□□□□□ -0.14
ARHGEF4-218ENST00000636987 ADAMTS12P58397 1594 aa14.15□□□□□ -0.14
ARHGEF4-218ENST00000636987 CUL7Q14999 1698 aa14.14□□□□□ -0.15
ARHGEF4-218ENST00000636987 DEKP35659 375 aaKnown RBP14.14□□□□□ -0.15
ARHGEF4-218ENST00000636987 CNGB1Q14028 1251 aaPredicted RBP14.11□□□□□ -0.15
ARHGEF4-218ENST00000636987 HNRNPUQ00839 825 aaKnown RBP eCLIP14.1□□□□□ -0.15
ARHGEF4-218ENST00000636987 A0A0U1RQG5 324 aaPredicted RBP14.1□□□□□ -0.15
ARHGEF4-218ENST00000636987 FHOD3Q2V2M9 1422 aa14.06□□□□□ -0.16
ARHGEF4-218ENST00000636987 CHD1O14646 1710 aa14.04□□□□□ -0.16
ARHGEF4-218ENST00000636987 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
ARHGEF4-218ENST00000636987 KIAA0586Q9BVV6 1533 aa14.04□□□□□ -0.16
ARHGEF4-218ENST00000636987 CEP170Q5SW79 1584 aa14.02□□□□□ -0.17
ARHGEF4-218ENST00000636987 PRG4Q92954 1404 aaPredicted RBP14.01□□□□□ -0.17
ARHGEF4-218ENST00000636987 FAM50AQ14320 339 aaKnown RBP14.01□□□□□ -0.17
ARHGEF4-218ENST00000636987 MYT1LQ9UL68 1186 aa14.01□□□□□ -0.17
ARHGEF4-218ENST00000636987 IQGAP2Q13576 1575 aa14□□□□□ -0.17
ARHGEF4-218ENST00000636987 NUP160Q12769 1436 aa14□□□□□ -0.17
ARHGEF4-218ENST00000636987 CARMIL2Q6F5E8 1435 aa13.99□□□□□ -0.17
ARHGEF4-218ENST00000636987 ARHGAP35Q9NRY4 1499 aa13.98□□□□□ -0.17
ARHGEF4-218ENST00000636987 CYB5RLQ6IPT4 315 aa13.97□□□□□ -0.17
ARHGEF4-218ENST00000636987 DHX57Q6P158 1386 aaKnown RBP13.97□□□□□ -0.17
ARHGEF4-218ENST00000636987 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
ARHGEF4-218ENST00000636987 ARAP1Q96P48 1450 aa13.97□□□□□ -0.17
ARHGEF4-218ENST00000636987 IL27Q8NEV9 243 aa13.96□□□□□ -0.18
ARHGEF4-218ENST00000636987 B4GALNT3Q6L9W6 998 aa13.95□□□□□ -0.18
ARHGEF4-218ENST00000636987 NPM2Q86SE8 214 aaKnown RBP13.95□□□□□ -0.18
ARHGEF4-218ENST00000636987 ANP32AP39687 249 aaKnown RBP13.94□□□□□ -0.18
ARHGEF4-218ENST00000636987 VPS8Q8N3P4 1428 aa13.93□□□□□ -0.18
ARHGEF4-218ENST00000636987 CTTNBP2Q8WZ74 1663 aa13.93□□□□□ -0.18
ARHGEF4-218ENST00000636987 PTPRGP23470 1445 aa13.93□□□□□ -0.18
ARHGEF4-218ENST00000636987 NOP58Q9Y2X3 529 aaKnown RBP13.92□□□□□ -0.18
ARHGEF4-218ENST00000636987 FAM9BQ8IZU0 186 aa13.91□□□□□ -0.18
ARHGEF4-218ENST00000636987 POLR3GLQ9BT43 218 aa13.89□□□□□ -0.19
ARHGEF4-218ENST00000636987 FANCIQ9NVI1 1328 aa13.89□□□□□ -0.19
ARHGEF4-218ENST00000636987 KANK4Q5T7N3 995 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF4-218ENST00000636987 BCL11BQ9C0K0 894 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF4-218ENST00000636987 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
ARHGEF4-218ENST00000636987 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
ARHGEF4-218ENST00000636987 ERCC6L2Q5T890 1561 aa13.87□□□□□ -0.19
ARHGEF4-218ENST00000636987 PDE4CQ08493 712 aa13.87□□□□□ -0.19
ARHGEF4-218ENST00000636987 FMN1Q68DA7 1419 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms