RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 KIAA0586Q9BVV6 1533 aa25.46■■□□□ 1.67
CTSD-207ENST00000636571 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
CTSD-207ENST00000636571 DNAJC5Q9H3Z4 198 aa25.43■■□□□ 1.66
CTSD-207ENST00000636571 IQGAP2Q13576 1575 aa25.41■■□□□ 1.66
CTSD-207ENST00000636571 SHROOM2Q13796 1616 aa25.4■■□□□ 1.66
CTSD-207ENST00000636571 UBTFP17480 764 aaKnown RBP25.39■■□□□ 1.66
CTSD-207ENST00000636571 LOC105371045A0A1W2PR82 267 aa25.38■■□□□ 1.65
CTSD-207ENST00000636571 JPH4Q96JJ6 628 aa25.38■■□□□ 1.65
CTSD-207ENST00000636571 ERCC6L2Q5T890 1561 aa25.38■■□□□ 1.65
CTSD-207ENST00000636571 ARHGEF11O15085 1522 aa25.33■■□□□ 1.65
CTSD-207ENST00000636571 RANGAP1P46060 587 aaPredicted RBP25.32■■□□□ 1.64
CTSD-207ENST00000636571 RIMBP3CA6NJZ7 1639 aa25.32■■□□□ 1.64
CTSD-207ENST00000636571 RIMBP3BA6NNM3 1639 aa25.32■■□□□ 1.64
CTSD-207ENST00000636571 RIMBP3Q9UFD9 1639 aa25.32■■□□□ 1.64
CTSD-207ENST00000636571 PRG4Q92954 1404 aaPredicted RBP25.32■■□□□ 1.64
CTSD-207ENST00000636571 UGGT2Q9NYU1 1516 aa25.27■■□□□ 1.64
CTSD-207ENST00000636571 DISP1Q96F81 1524 aa25.24■■□□□ 1.63
CTSD-207ENST00000636571 TNIKQ9UKE5 1360 aa25.2■■□□□ 1.62
CTSD-207ENST00000636571 KIAA0556O60303 1618 aa25.19■■□□□ 1.62
CTSD-207ENST00000636571 ARAP1Q96P48 1450 aa25.18■■□□□ 1.62
CTSD-207ENST00000636571 P3H3Q8IVL6 736 aa25.17■■□□□ 1.62
CTSD-207ENST00000636571 TTBK1Q5TCY1 1321 aaPredicted RBP25.16■■□□□ 1.62
CTSD-207ENST00000636571 SAMD9Q5K651 1589 aa25.15■■□□□ 1.62
CTSD-207ENST00000636571 CARMIL2Q6F5E8 1435 aa25.14■■□□□ 1.62
CTSD-207ENST00000636571 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
CTSD-207ENST00000636571 ARHGAP35Q9NRY4 1499 aa25.08■■□□□ 1.61
CTSD-207ENST00000636571 FHOD3Q2V2M9 1422 aa25.07■■□□□ 1.6
CTSD-207ENST00000636571 EFCAB5A4FU69 1503 aa25.05■■□□□ 1.6
CTSD-207ENST00000636571 CEP162Q5TB80 1403 aa25.04■■□□□ 1.6
CTSD-207ENST00000636571 PTPRGP23470 1445 aa25.03■■□□□ 1.6
CTSD-207ENST00000636571 CLIP1P30622 1438 aa25.03■■□□□ 1.6
CTSD-207ENST00000636571 PLB1Q6P1J6 1458 aa24.94■■□□□ 1.58
CTSD-207ENST00000636571 ADCY10Q96PN6 1610 aa24.91■■□□□ 1.58
CTSD-207ENST00000636571 UACAQ9BZF9 1416 aa24.88■■□□□ 1.57
CTSD-207ENST00000636571 ABCA8O94911 1581 aa24.88■■□□□ 1.57
CTSD-207ENST00000636571 ABCC2Q92887 1545 aa24.83■■□□□ 1.57
CTSD-207ENST00000636571 RAPGEF6Q8TEU7 1601 aa24.83■■□□□ 1.57
CTSD-207ENST00000636571 ARID3CA6NKF2 412 aa24.82■■□□□ 1.56
CTSD-207ENST00000636571 FMN1Q68DA7 1419 aa24.81■■□□□ 1.56
CTSD-207ENST00000636571 UHRF1BP1LA0JNW5 1464 aa24.79■■□□□ 1.56
CTSD-207ENST00000636571 PCF11O94913 1555 aaKnown RBP24.78■■□□□ 1.56
CTSD-207ENST00000636571 NUP153P49790 1475 aaKnown RBP24.76■■□□□ 1.55
CTSD-207ENST00000636571 ATP1B4Q9UN42 357 aaPredicted RBP24.75■■□□□ 1.55
CTSD-207ENST00000636571 LRRIQ1Q96JM4 1722 aa24.73■■□□□ 1.55
CTSD-207ENST00000636571 ZCCHC11Q5TAX3 1644 aaKnown RBP24.73■■□□□ 1.55
CTSD-207ENST00000636571 KDM5BQ9UGL1 1544 aa24.71■■□□□ 1.55
CTSD-207ENST00000636571 CASKIN1Q8WXD9 1431 aa24.69■■□□□ 1.54
CTSD-207ENST00000636571 ATP10BO94823 1461 aa24.69■■□□□ 1.54
CTSD-207ENST00000636571 HECW1Q76N89 1606 aa24.69■■□□□ 1.54
CTSD-207ENST00000636571 CDK13Q14004 1512 aaKnown RBP24.68■■□□□ 1.54
CTSD-207ENST00000636571 VPS8Q8N3P4 1428 aa24.67■■□□□ 1.54
CTSD-207ENST00000636571 NPM1P06748 294 aaKnown RBP eCLIP24.66■■□□□ 1.54
CTSD-207ENST00000636571 FYCO1Q9BQS8 1478 aa24.65■■□□□ 1.54
CTSD-207ENST00000636571 EPRSP07814 1512 aaKnown RBP24.63■■□□□ 1.53
CTSD-207ENST00000636571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.62■■□□□ 1.53
CTSD-207ENST00000636571 HNRNPUL2Q1KMD3 747 aaKnown RBP24.62■■□□□ 1.53
CTSD-207ENST00000636571 ASXL2Q76L83 1435 aa24.59■■□□□ 1.53
CTSD-207ENST00000636571 MAPKBP1O60336 1514 aa24.59■■□□□ 1.53
CTSD-207ENST00000636571 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
CTSD-207ENST00000636571 WDR7Q9Y4E6 1490 aa24.51■■□□□ 1.51
CTSD-207ENST00000636571 MAGI3Q5TCQ9 1506 aa24.5■■□□□ 1.51
CTSD-207ENST00000636571 KCNH8Q96L42 1107 aa24.47■■□□□ 1.51
CTSD-207ENST00000636571 CFAP43Q8NDM7 1665 aa24.47■■□□□ 1.51
CTSD-207ENST00000636571 KIF13AQ9H1H9 1805 aa24.46■■□□□ 1.51
CTSD-207ENST00000636571 DIP2BQ9P265 1576 aa24.46■■□□□ 1.51
CTSD-207ENST00000636571 TIAM1Q13009 1591 aa24.45■■□□□ 1.5
CTSD-207ENST00000636571 PLEKHD1A6NEE1 506 aa24.44■■□□□ 1.5
CTSD-207ENST00000636571 ABCC10Q5T3U5 1492 aa24.44■■□□□ 1.5
CTSD-207ENST00000636571 TRHP20396 242 aaPredicted RBP24.44■■□□□ 1.5
CTSD-207ENST00000636571 FAM69CQ0P6D2 419 aa24.41■■□□□ 1.5
CTSD-207ENST00000636571 KIF14Q15058 1648 aa24.4■■□□□ 1.5
CTSD-207ENST00000636571 TROQ12816 1431 aaPredicted RBP24.39■■□□□ 1.5
CTSD-207ENST00000636571 CDK11AQ9UQ88 783 aaPredicted RBP24.39■■□□□ 1.49
CTSD-207ENST00000636571 KANK4Q5T7N3 995 aaPredicted RBP24.38■■□□□ 1.49
CTSD-207ENST00000636571 MTUS2Q5JR59 1369 aa24.34■■□□□ 1.49
CTSD-207ENST00000636571 MAP3K1Q13233 1512 aa24.34■■□□□ 1.49
CTSD-207ENST00000636571 GLI2P10070 1586 aa24.33■■□□□ 1.49
CTSD-207ENST00000636571 TTC37Q6PGP7 1564 aa24.33■■□□□ 1.49
CTSD-207ENST00000636571 APLP2Q06481 763 aa24.33■■□□□ 1.49
CTSD-207ENST00000636571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.33■■□□□ 1.495e-7■■■■□ 21.6
CTSD-207ENST00000636571 LRRC9Q6ZRR7 1453 aa24.33■■□□□ 1.48
CTSD-207ENST00000636571 TSPOAP1O95153 1857 aa24.32■■□□□ 1.48
CTSD-207ENST00000636571 EHBP1L1Q8N3D4 1523 aa24.31■■□□□ 1.48
CTSD-207ENST00000636571 PPARGC1BQ86YN6 1023 aaKnown RBP24.31■■□□□ 1.48
CTSD-207ENST00000636571 ABCA9Q8IUA7 1624 aa24.3■■□□□ 1.48
CTSD-207ENST00000636571 MAP3K4Q9Y6R4 1608 aa24.3■■□□□ 1.48
CTSD-207ENST00000636571 PPRC1Q5VV67 1664 aaKnown RBP24.25■■□□□ 1.47
CTSD-207ENST00000636571 CD109Q6YHK3 1445 aa24.24■■□□□ 1.47
CTSD-207ENST00000636571 SUPT6HQ7KZ85 1726 aaKnown RBP24.23■■□□□ 1.47
CTSD-207ENST00000636571 NCOA2Q15596 1464 aa24.21■■□□□ 1.47
CTSD-207ENST00000636571 MYO5CQ9NQX4 1742 aa24.19■■□□□ 1.46
CTSD-207ENST00000636571 CDC42BPAQ5VT25 1732 aa24.18■■□□□ 1.46
CTSD-207ENST00000636571 CDC42BPBQ9Y5S2 1711 aa24.16■■□□□ 1.46
CTSD-207ENST00000636571 GPATCH8Q9UKJ3 1502 aaKnown RBP24.14■■□□□ 1.45
CTSD-207ENST00000636571 PREX2Q70Z35 1606 aa24.13■■□□□ 1.45
CTSD-207ENST00000636571 PLCH2O75038 1416 aa24.13■■□□□ 1.45
CTSD-207ENST00000636571 CCNB3Q8WWL7 1395 aa24.13■■□□□ 1.45
CTSD-207ENST00000636571 PHLDB1Q86UU1 1377 aa24.1■■□□□ 1.45
CTSD-207ENST00000636571 ARHGAP5Q13017 1502 aa24.09■■□□□ 1.45
CTSD-207ENST00000636571 FANCAO15360 1455 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms