RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 NISCHQ9Y2I1 1504 aa36.98■■■■□ 3.51
CTSD-207ENST00000636571 CCDC180Q9P1Z9 1646 aa32.64■■■□□ 2.82
CTSD-207ENST00000636571 ABCC9O60706 1549 aa31.67■■■□□ 2.66
CTSD-207ENST00000636571 ZCCHC6Q5VYS8 1495 aaKnown RBP30.9■■■□□ 2.54
CTSD-207ENST00000636571 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.52
CTSD-207ENST00000636571 NACADO15069 1562 aa30.57■■■□□ 2.48
CTSD-207ENST00000636571 RB1CC1Q8TDY2 1594 aa30.52■■■□□ 2.48
CTSD-207ENST00000636571 DCAF1Q9Y4B6 1507 aa30.51■■■□□ 2.48
CTSD-207ENST00000636571 MYO15BQ96JP2 1530 aa30.47■■■□□ 2.47
CTSD-207ENST00000636571 UNC13AQ9UPW8 1703 aa29.99■■■□□ 2.39
CTSD-207ENST00000636571 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
CTSD-207ENST00000636571 PABPN1Q86U42 306 aaKnown RBP eCLIP29.69■■■□□ 2.342e-15■□□□□ 9.1
CTSD-207ENST00000636571 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
CTSD-207ENST00000636571 SHROOM4Q9ULL8 1493 aa29.62■■■□□ 2.33
CTSD-207ENST00000636571 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
CTSD-207ENST00000636571 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
CTSD-207ENST00000636571 DNAJC5BQ9UF47 199 aa28.75■■■□□ 2.19
CTSD-207ENST00000636571 CC2D2AQ9P2K1 1620 aa28.64■■■□□ 2.18
CTSD-207ENST00000636571 SMARCA4P51532 1647 aa28.63■■■□□ 2.17
CTSD-207ENST00000636571 BAZ1AQ9NRL2 1556 aaPredicted RBP28.6■■■□□ 2.17
CTSD-207ENST00000636571 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
CTSD-207ENST00000636571 RSF1Q96T23 1441 aaPredicted RBP28.36■■■□□ 2.13
CTSD-207ENST00000636571 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
CTSD-207ENST00000636571 WIZO95785 1651 aa28.32■■■□□ 2.12
CTSD-207ENST00000636571 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
CTSD-207ENST00000636571 SMARCA2P51531 1590 aa28.27■■■□□ 2.12
CTSD-207ENST00000636571 NCAPD3P42695 1498 aa28.21■■■□□ 2.11
CTSD-207ENST00000636571 BAZ1BQ9UIG0 1483 aaKnown RBP28.13■■■□□ 2.09
CTSD-207ENST00000636571 HMGXB3Q12766 1538 aa28.12■■■□□ 2.09
CTSD-207ENST00000636571 SUPT5HO00267 1087 aaKnown RBP28.04■■■□□ 2.08
CTSD-207ENST00000636571 TOP2AP11388 1531 aaKnown RBP27.94■■■□□ 2.06
CTSD-207ENST00000636571 CCDC88BA6NC98 1476 aa27.66■■■□□ 2.02
CTSD-207ENST00000636571 NESP48681 1621 aa27.57■■■□□ 2
CTSD-207ENST00000636571 CADPSQ9ULU8 1353 aa27.44■■□□□ 1.98
CTSD-207ENST00000636571 LAMC3Q9Y6N6 1575 aa27.41■■□□□ 1.98
CTSD-207ENST00000636571 CFTRP13569 1480 aa27.37■■□□□ 1.97
CTSD-207ENST00000636571 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
CTSD-207ENST00000636571 PRDM2Q13029 1718 aa27.23■■□□□ 1.95
CTSD-207ENST00000636571 ERCC6Q03468 1493 aa27.2■■□□□ 1.94
CTSD-207ENST00000636571 PDS5BQ9NTI5 1447 aa27.19■■□□□ 1.94
CTSD-207ENST00000636571 FANCD2Q9BXW9 1451 aa27.16■■□□□ 1.94
CTSD-207ENST00000636571 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
CTSD-207ENST00000636571 THOC2Q8NI27 1593 aaKnown RBP26.99■■□□□ 1.91
CTSD-207ENST00000636571 MRC2Q9UBG0 1479 aa26.93■■□□□ 1.9
CTSD-207ENST00000636571 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
CTSD-207ENST00000636571 ABCC8Q09428 1581 aa26.85■■□□□ 1.89
CTSD-207ENST00000636571 WDR62O43379 1518 aa26.84■■□□□ 1.89
CTSD-207ENST00000636571 TOPBP1Q92547 1522 aa26.78■■□□□ 1.88
CTSD-207ENST00000636571 CUX1P39880 1505 aa26.77■■□□□ 1.88
CTSD-207ENST00000636571 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
CTSD-207ENST00000636571 WRNQ14191 1432 aaPredicted RBP eCLIP26.7■■□□□ 1.87
CTSD-207ENST00000636571 SYNJ1O43426 1573 aa26.69■■□□□ 1.86
CTSD-207ENST00000636571 CUX2O14529 1486 aa26.68■■□□□ 1.86
CTSD-207ENST00000636571 TOP2BQ02880 1626 aa26.6■■□□□ 1.85
CTSD-207ENST00000636571 BIVM-ERCC5R4GMW8 1640 aa26.6■■□□□ 1.85
CTSD-207ENST00000636571 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
CTSD-207ENST00000636571 POLA1P09884 1462 aaPredicted RBP26.59■■□□□ 1.85
CTSD-207ENST00000636571 RAD54L2Q9Y4B4 1467 aa26.53■■□□□ 1.84
CTSD-207ENST00000636571 TARBP1Q13395 1621 aaKnown RBP26.47■■□□□ 1.83
CTSD-207ENST00000636571 SOGA1O94964 1423 aa26.46■■□□□ 1.83
CTSD-207ENST00000636571 IFT140Q96RY7 1462 aa26.45■■□□□ 1.82
CTSD-207ENST00000636571 ZNF608Q9ULD9 1512 aaPredicted RBP26.42■■□□□ 1.82
CTSD-207ENST00000636571 CHIC1Q5VXU3 224 aa26.37■■□□□ 1.81
CTSD-207ENST00000636571 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
CTSD-207ENST00000636571 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
CTSD-207ENST00000636571 TDRD9Q8NDG6 1382 aaKnown RBP26.32■■□□□ 1.8
CTSD-207ENST00000636571 ABCA10Q8WWZ4 1543 aa26.31■■□□□ 1.8
CTSD-207ENST00000636571 AQRO60306 1485 aaKnown RBP eCLIP26.31■■□□□ 1.81e-6■■■■■ 31.1
CTSD-207ENST00000636571 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
CTSD-207ENST00000636571 ABCA5Q8WWZ7 1642 aa26.2■■□□□ 1.78
CTSD-207ENST00000636571 GAPVD1Q14C86 1478 aa26.16■■□□□ 1.78
CTSD-207ENST00000636571 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
CTSD-207ENST00000636571 RUSC2Q8N2Y8 1516 aa26.13■■□□□ 1.77
CTSD-207ENST00000636571 KIF27Q86VH2 1401 aa26.07■■□□□ 1.76
CTSD-207ENST00000636571 GRIN2BQ13224 1484 aa26.07■■□□□ 1.76
CTSD-207ENST00000636571 SNAPC4Q5SXM2 1469 aa26.05■■□□□ 1.76
CTSD-207ENST00000636571 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
CTSD-207ENST00000636571 IGF1RP08069 1367 aa25.96■■□□□ 1.75
CTSD-207ENST00000636571 MAGI1Q96QZ7 1491 aaPredicted RBP25.95■■□□□ 1.74
CTSD-207ENST00000636571 FAM9AQ8IZU1 332 aaPredicted RBP25.94■■□□□ 1.74
CTSD-207ENST00000636571 ADAMTS12P58397 1594 aa25.92■■□□□ 1.74
CTSD-207ENST00000636571 CHD1O14646 1710 aa25.91■■□□□ 1.74
CTSD-207ENST00000636571 FBLN2P98095 1184 aa25.9■■□□□ 1.74
CTSD-207ENST00000636571 SYNJ2O15056 1496 aa25.86■■□□□ 1.73
CTSD-207ENST00000636571 FHAD1B1AJZ9 1412 aa25.84■■□□□ 1.73
CTSD-207ENST00000636571 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
CTSD-207ENST00000636571 CUL7Q14999 1698 aa25.84■■□□□ 1.73
CTSD-207ENST00000636571 CARMIL1Q5VZK9 1371 aa25.8■■□□□ 1.72
CTSD-207ENST00000636571 EEA1Q15075 1411 aa25.79■■□□□ 1.72
CTSD-207ENST00000636571 CSRNP3Q8WYN3 585 aa25.79■■□□□ 1.72
CTSD-207ENST00000636571 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
CTSD-207ENST00000636571 PRXQ9BXM0 1461 aa25.71■■□□□ 1.71
CTSD-207ENST00000636571 RAPGEF2Q9Y4G8 1499 aa25.69■■□□□ 1.7
CTSD-207ENST00000636571 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
CTSD-207ENST00000636571 CEP170Q5SW79 1584 aa25.68■■□□□ 1.7
CTSD-207ENST00000636571 EHMT2Q96KQ7 1210 aa25.66■■□□□ 1.7
CTSD-207ENST00000636571 NUP160Q12769 1436 aa25.62■■□□□ 1.69
CTSD-207ENST00000636571 CLASP1Q7Z460 1538 aa25.58■■□□□ 1.69
CTSD-207ENST00000636571 KIF21BO75037 1637 aa25.58■■□□□ 1.69
CTSD-207ENST00000636571 CTTNBP2Q8WZ74 1663 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms