RNA–Protein interactions for RNA: ENST00000634308.1

ATP7B-211, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 4,321 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-211ENST00000634308 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
ATP7B-211ENST00000634308 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
ATP7B-211ENST00000634308 IRX6P78412 446 aaPredicted RBP13.33□□□□□ -0.28
ATP7B-211ENST00000634308 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
ATP7B-211ENST00000634308 ATAD2BQ9ULI0 1458 aa13.31□□□□□ -0.28
ATP7B-211ENST00000634308 FAM9BQ8IZU0 186 aa13.29□□□□□ -0.28
ATP7B-211ENST00000634308 WIZO95785 1651 aa13.27□□□□□ -0.28
ATP7B-211ENST00000634308 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
ATP7B-211ENST00000634308 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
ATP7B-211ENST00000634308 RBM19Q9Y4C8 960 aaKnown RBP13.26□□□□□ -0.29
ATP7B-211ENST00000634308 TDRD9Q8NDG6 1382 aaKnown RBP13.26□□□□□ -0.29
ATP7B-211ENST00000634308 ZNF777Q9ULD5 760 aaPredicted RBP13.25□□□□□ -0.29
ATP7B-211ENST00000634308 CHIC2Q9UKJ5 165 aa13.25□□□□□ -0.29
ATP7B-211ENST00000634308 EIF5BO60841 1220 aaKnown RBP13.23□□□□□ -0.29
ATP7B-211ENST00000634308 VPS8Q8N3P4 1428 aa13.23□□□□□ -0.29
ATP7B-211ENST00000634308 NBR1Q14596 966 aa13.22□□□□□ -0.29
ATP7B-211ENST00000634308 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
ATP7B-211ENST00000634308 NCAPD3P42695 1498 aa13.21□□□□□ -0.3
ATP7B-211ENST00000634308 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
ATP7B-211ENST00000634308 ANP32AP39687 249 aaKnown RBP13.19□□□□□ -0.3
ATP7B-211ENST00000634308 RUSC2Q8N2Y8 1516 aa13.19□□□□□ -0.3
ATP7B-211ENST00000634308 NPM2Q86SE8 214 aaKnown RBP13.18□□□□□ -0.3
ATP7B-211ENST00000634308 MRS2Q9HD23 443 aa13.18□□□□□ -0.3
ATP7B-211ENST00000634308 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
ATP7B-211ENST00000634308 DEKP35659 375 aaKnown RBP13.17□□□□□ -0.3
ATP7B-211ENST00000634308 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
ATP7B-211ENST00000634308 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
ATP7B-211ENST00000634308 PLEKHD1A6NEE1 506 aa13.15□□□□□ -0.3
ATP7B-211ENST00000634308 RRP7BPQ9NSQ0 103 aa13.14□□□□□ -0.31
ATP7B-211ENST00000634308 FAM69CQ0P6D2 419 aa13.13□□□□□ -0.31
ATP7B-211ENST00000634308 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
ATP7B-211ENST00000634308 SALL2Q9Y467 1007 aaPredicted RBP13.12□□□□□ -0.31
ATP7B-211ENST00000634308 MLECQ14165 292 aa13.12□□□□□ -0.31
ATP7B-211ENST00000634308 CCDC136Q96JN2 1154 aa13.12□□□□□ -0.31
ATP7B-211ENST00000634308 NESP48681 1621 aa13.11□□□□□ -0.31
ATP7B-211ENST00000634308 EIF4G2P78344 907 aaKnown RBP eCLIP13.11□□□□□ -0.31
ATP7B-211ENST00000634308 SENP3-EIF4A1A0A087X0R7 540 aa13.11□□□□□ -0.31
ATP7B-211ENST00000634308 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
ATP7B-211ENST00000634308 TOP2AP11388 1531 aaKnown RBP13.08□□□□□ -0.32
ATP7B-211ENST00000634308 JPH4Q96JJ6 628 aa13.07□□□□□ -0.32
ATP7B-211ENST00000634308 TMC1Q8TDI8 760 aa13.06□□□□□ -0.32
ATP7B-211ENST00000634308 DHX57Q6P158 1386 aaKnown RBP13.06□□□□□ -0.32
ATP7B-211ENST00000634308 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
ATP7B-211ENST00000634308 RAPGEF2Q9Y4G8 1499 aa13.05□□□□□ -0.32
ATP7B-211ENST00000634308 RAB3GAP2Q9H2M9 1393 aa13.05□□□□□ -0.32
ATP7B-211ENST00000634308 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
ATP7B-211ENST00000634308 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
ATP7B-211ENST00000634308 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.32
ATP7B-211ENST00000634308 BICRAQ9NZM4 1560 aa13.02□□□□□ -0.32
ATP7B-211ENST00000634308 SETD5Q9C0A6 1442 aa13.02□□□□□ -0.33
ATP7B-211ENST00000634308 CUX2O14529 1486 aa13.01□□□□□ -0.33
ATP7B-211ENST00000634308 CCER2I3L3R5 266 aa13□□□□□ -0.33
ATP7B-211ENST00000634308 B4GALNT3Q6L9W6 998 aa13□□□□□ -0.33
ATP7B-211ENST00000634308 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
ATP7B-211ENST00000634308 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
ATP7B-211ENST00000634308 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
ATP7B-211ENST00000634308 PPP4R2Q9NY27 417 aa12.98□□□□□ -0.33
ATP7B-211ENST00000634308 TIMELESSQ9UNS1 1208 aa12.98□□□□□ -0.33
ATP7B-211ENST00000634308 SMARCA4P51532 1647 aa12.98□□□□□ -0.33
ATP7B-211ENST00000634308 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
ATP7B-211ENST00000634308 SENP3Q9H4L4 574 aaPredicted RBP12.97□□□□□ -0.33
ATP7B-211ENST00000634308 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
ATP7B-211ENST00000634308 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
ATP7B-211ENST00000634308 CARMIL1Q5VZK9 1371 aa12.96□□□□□ -0.34
ATP7B-211ENST00000634308 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.34
ATP7B-211ENST00000634308 PPP1R15AO75807 674 aaPredicted RBP12.95□□□□□ -0.34
ATP7B-211ENST00000634308 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.94□□□□□ -0.34
ATP7B-211ENST00000634308 TSPY4P0CV99 314 aa12.94□□□□□ -0.34
ATP7B-211ENST00000634308 TSPY10P0CW01 314 aa12.94□□□□□ -0.34
ATP7B-211ENST00000634308 CANXP27824 592 aaKnown RBP12.92□□□□□ -0.34
ATP7B-211ENST00000634308 FHAD1B1AJZ9 1412 aa12.92□□□□□ -0.34
ATP7B-211ENST00000634308 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.342e-6■■■■■ 28
ATP7B-211ENST00000634308 HSPA5P11021 654 aaKnown RBP12.9□□□□□ -0.34
ATP7B-211ENST00000634308 FANCIQ9NVI1 1328 aa12.9□□□□□ -0.34
ATP7B-211ENST00000634308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.351e-6■■□□□ 12.8
ATP7B-211ENST00000634308 FOXD1Q16676 465 aa12.87□□□□□ -0.35
ATP7B-211ENST00000634308 PTPRGP23470 1445 aa12.86□□□□□ -0.35
ATP7B-211ENST00000634308 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
ATP7B-211ENST00000634308 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
ATP7B-211ENST00000634308 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
ATP7B-211ENST00000634308 NEFMP07197 916 aa12.81□□□□□ -0.36
ATP7B-211ENST00000634308 KIF21BO75037 1637 aa12.81□□□□□ -0.36
ATP7B-211ENST00000634308 RGL3Q3MIN7 710 aa12.81□□□□□ -0.36
ATP7B-211ENST00000634308 CARD11Q9BXL7 1154 aa12.81□□□□□ -0.36
ATP7B-211ENST00000634308 LAS1LQ9Y4W2 734 aaKnown RBP12.81□□□□□ -0.36
ATP7B-211ENST00000634308 LAMC3Q9Y6N6 1575 aa12.79□□□□□ -0.36
ATP7B-211ENST00000634308 MSH5O43196 834 aa12.79□□□□□ -0.36
ATP7B-211ENST00000634308 WDR43Q15061 677 aaKnown RBP eCLIP12.79□□□□□ -0.36
ATP7B-211ENST00000634308 CFDP1Q9UEE9 299 aaPredicted RBP12.79□□□□□ -0.36
ATP7B-211ENST00000634308 EFCAB2Q5VUJ9 269 aa12.78□□□□□ -0.36
ATP7B-211ENST00000634308 GAPVD1Q14C86 1478 aa12.77□□□□□ -0.36
ATP7B-211ENST00000634308 FHOD3Q2V2M9 1422 aa12.77□□□□□ -0.36
ATP7B-211ENST00000634308 RAD54L2Q9Y4B4 1467 aa12.76□□□□□ -0.37
ATP7B-211ENST00000634308 L3MBTL2Q969R5 705 aa12.76□□□□□ -0.37
ATP7B-211ENST00000634308 GGT6Q6P531 493 aa12.76□□□□□ -0.37
ATP7B-211ENST00000634308 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
ATP7B-211ENST00000634308 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.75□□□□□ -0.37
ATP7B-211ENST00000634308 MPHOSPH9Q99550 1183 aa12.75□□□□□ -0.37
ATP7B-211ENST00000634308 ARXQ96QS3 562 aa12.75□□□□□ -0.37
ATP7B-211ENST00000634308 GRIN2BQ13224 1484 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms