RNA–Protein interactions for RNA: ENST00000634308.1

ATP7B-211, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 4,321 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-211ENST00000634308 DCAF8L2P0C7V8 631 aa17.23■□□□□ 0.35
ATP7B-211ENST00000634308 NISCHQ9Y2I1 1504 aa17.18■□□□□ 0.34
ATP7B-211ENST00000634308 SUPT5HO00267 1087 aaKnown RBP16.3■□□□□ 0.2
ATP7B-211ENST00000634308 SHROOM4Q9ULL8 1493 aa16.18■□□□□ 0.18
ATP7B-211ENST00000634308 ABCC9O60706 1549 aa15.8■□□□□ 0.12
ATP7B-211ENST00000634308 PELP1Q8IZL8 1130 aaKnown RBP15.74■□□□□ 0.11
ATP7B-211ENST00000634308 PCGF6Q9BYE7 350 aa15.61■□□□□ 0.09
ATP7B-211ENST00000634308 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
ATP7B-211ENST00000634308 HRCP23327 699 aa15.39■□□□□ 0.05
ATP7B-211ENST00000634308 MYT1Q01538 1121 aa15.38■□□□□ 0.05
ATP7B-211ENST00000634308 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
ATP7B-211ENST00000634308 FAM9AQ8IZU1 332 aaPredicted RBP15.26■□□□□ 0.03
ATP7B-211ENST00000634308 CHIC1Q5VXU3 224 aa15.13■□□□□ 0.01
ATP7B-211ENST00000634308 PPARGC1BQ86YN6 1023 aaKnown RBP15.06■□□□□ 0
ATP7B-211ENST00000634308 LOC105371045A0A1W2PR82 267 aa15.03■□□□□ -0
ATP7B-211ENST00000634308 TRIM41Q8WV44 630 aa15.02□□□□□ -0.01
ATP7B-211ENST00000634308 TTBK1Q5TCY1 1321 aaPredicted RBP15.01□□□□□ -0.01
ATP7B-211ENST00000634308 ZEB1P37275 1124 aaPredicted RBP14.99□□□□□ -0.01
ATP7B-211ENST00000634308 TRIM26Q12899 539 aaPredicted RBP14.94□□□□□ -0.02
ATP7B-211ENST00000634308 CCER1Q8TC90 406 aaPredicted RBP14.87□□□□□ -0.03
ATP7B-211ENST00000634308 CENPBP07199 599 aaPredicted RBP14.79□□□□□ -0.04
ATP7B-211ENST00000634308 APLP2Q06481 763 aa14.71□□□□□ -0.05
ATP7B-211ENST00000634308 RANGAP1P46060 587 aaPredicted RBP14.61□□□□□ -0.07
ATP7B-211ENST00000634308 YTHDC1Q96MU7 727 aaKnown RBP14.6□□□□□ -0.07
ATP7B-211ENST00000634308 UBTFP17480 764 aaKnown RBP14.59□□□□□ -0.07
ATP7B-211ENST00000634308 SCAF1Q9H7N4 1312 aaKnown RBP14.57□□□□□ -0.08
ATP7B-211ENST00000634308 RB1CC1Q8TDY2 1594 aa14.52□□□□□ -0.08
ATP7B-211ENST00000634308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.09
ATP7B-211ENST00000634308 GTF3C3Q9Y5Q9 886 aa14.45□□□□□ -0.1
ATP7B-211ENST00000634308 FBLN2P98095 1184 aa14.45□□□□□ -0.1
ATP7B-211ENST00000634308 MYO15BQ96JP2 1530 aa14.45□□□□□ -0.1
ATP7B-211ENST00000634308 ACIN1Q9UKV3 1341 aaKnown RBP14.41□□□□□ -0.1
ATP7B-211ENST00000634308 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
ATP7B-211ENST00000634308 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
ATP7B-211ENST00000634308 DIEXFQ68CQ4 756 aaKnown RBP14.37□□□□□ -0.11
ATP7B-211ENST00000634308 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.11
ATP7B-211ENST00000634308 DCAF1Q9Y4B6 1507 aa14.32□□□□□ -0.12
ATP7B-211ENST00000634308 SCRIBQ14160 1630 aa14.32□□□□□ -0.12
ATP7B-211ENST00000634308 NACADO15069 1562 aa14.24□□□□□ -0.13
ATP7B-211ENST00000634308 NEUROD1Q13562 356 aa14.24□□□□□ -0.13
ATP7B-211ENST00000634308 ERCC6Q03468 1493 aa14.23□□□□□ -0.13
ATP7B-211ENST00000634308 ATP1B4Q9UN42 357 aaPredicted RBP14.19□□□□□ -0.14
ATP7B-211ENST00000634308 ITGAEP38570 1179 aa14.14□□□□□ -0.15
ATP7B-211ENST00000634308 MYT1LQ9UL68 1186 aa14.14□□□□□ -0.15
ATP7B-211ENST00000634308 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
ATP7B-211ENST00000634308 NEFLP07196 543 aa14.09□□□□□ -0.15
ATP7B-211ENST00000634308 CECR2Q9BXF3 1484 aa14.07□□□□□ -0.16
ATP7B-211ENST00000634308 ERICH6Q7L0X2 663 aa14.06□□□□□ -0.16
ATP7B-211ENST00000634308 ZNF316A6NFI3 1004 aaPredicted RBP14.06□□□□□ -0.16
ATP7B-211ENST00000634308 DNAJC5BQ9UF47 199 aa14.06□□□□□ -0.16
ATP7B-211ENST00000634308 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
ATP7B-211ENST00000634308 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
ATP7B-211ENST00000634308 CHMP7Q8WUX9 453 aaPredicted RBP13.9□□□□□ -0.18
ATP7B-211ENST00000634308 BCL11AQ9H165 835 aa13.9□□□□□ -0.18
ATP7B-211ENST00000634308 AEBP2Q6ZN18 517 aaPredicted RBP13.88□□□□□ -0.19
ATP7B-211ENST00000634308 RSF1Q96T23 1441 aaPredicted RBP13.88□□□□□ -0.19
ATP7B-211ENST00000634308 BCANQ96GW7 911 aa13.86□□□□□ -0.19
ATP7B-211ENST00000634308 ANP32EQ9BTT0 268 aa13.8□□□□□ -0.2
ATP7B-211ENST00000634308 MIER1Q8N108 512 aa13.78□□□□□ -0.2
ATP7B-211ENST00000634308 FAM50AQ14320 339 aaKnown RBP13.77□□□□□ -0.21
ATP7B-211ENST00000634308 BAZ1BQ9UIG0 1483 aaKnown RBP13.75□□□□□ -0.21
ATP7B-211ENST00000634308 CNGB1Q14028 1251 aaPredicted RBP13.73□□□□□ -0.21
ATP7B-211ENST00000634308 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
ATP7B-211ENST00000634308 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
ATP7B-211ENST00000634308 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
ATP7B-211ENST00000634308 POLR3GLQ9BT43 218 aa13.69□□□□□ -0.22
ATP7B-211ENST00000634308 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
ATP7B-211ENST00000634308 CEP162Q5TB80 1403 aa13.65□□□□□ -0.22
ATP7B-211ENST00000634308 ESF1Q9H501 851 aaKnown RBP13.64□□□□□ -0.23
ATP7B-211ENST00000634308 CYB5RLQ6IPT4 315 aa13.63□□□□□ -0.23
ATP7B-211ENST00000634308 ANP32CO43423 234 aa13.62□□□□□ -0.23
ATP7B-211ENST00000634308 FKBP8Q14318 412 aa13.58□□□□□ -0.24
ATP7B-211ENST00000634308 P3H3Q8IVL6 736 aa13.57□□□□□ -0.24
ATP7B-211ENST00000634308 DDX10Q13206 875 aaKnown RBP13.56□□□□□ -0.24
ATP7B-211ENST00000634308 ARID3CA6NKF2 412 aa13.55□□□□□ -0.24
ATP7B-211ENST00000634308 CLIP1P30622 1438 aa13.55□□□□□ -0.24
ATP7B-211ENST00000634308 TRIM52Q96A61 297 aa13.53□□□□□ -0.24
ATP7B-211ENST00000634308 TNIKQ9UKE5 1360 aa13.52□□□□□ -0.25
ATP7B-211ENST00000634308 CDK11AQ9UQ88 783 aaPredicted RBP13.49□□□□□ -0.25
ATP7B-211ENST00000634308 SUPT16HQ9Y5B9 1047 aaKnown RBP13.48□□□□□ -0.25
ATP7B-211ENST00000634308 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
ATP7B-211ENST00000634308 SOGA1O94964 1423 aa13.46□□□□□ -0.25
ATP7B-211ENST00000634308 EEA1Q15075 1411 aa13.46□□□□□ -0.25
ATP7B-211ENST00000634308 HIRIP3Q9BW71 556 aaPredicted RBP13.46□□□□□ -0.26
ATP7B-211ENST00000634308 ARID4BQ4LE39 1312 aaPredicted RBP13.45□□□□□ -0.26
ATP7B-211ENST00000634308 RTL5Q5HYW3 569 aaPredicted RBP13.45□□□□□ -0.26
ATP7B-211ENST00000634308 SMARCA2P51531 1590 aa13.44□□□□□ -0.26
ATP7B-211ENST00000634308 MROH2BQ7Z745 1585 aa13.42□□□□□ -0.26
ATP7B-211ENST00000634308 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
ATP7B-211ENST00000634308 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
ATP7B-211ENST00000634308 WRNQ14191 1432 aaPredicted RBP eCLIP13.41□□□□□ -0.26
ATP7B-211ENST00000634308 BAZ1AQ9NRL2 1556 aaPredicted RBP13.4□□□□□ -0.26
ATP7B-211ENST00000634308 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
ATP7B-211ENST00000634308 HNRNPUQ00839 825 aaKnown RBP eCLIP13.4□□□□□ -0.27
ATP7B-211ENST00000634308 KCNH8Q96L42 1107 aa13.39□□□□□ -0.27
ATP7B-211ENST00000634308 ZNF326Q5BKZ1 582 aaKnown RBP13.38□□□□□ -0.27
ATP7B-211ENST00000634308 CC2D2AQ9P2K1 1620 aa13.38□□□□□ -0.27
ATP7B-211ENST00000634308 CCDC88BA6NC98 1476 aa13.37□□□□□ -0.27
ATP7B-211ENST00000634308 DAXXQ9UER7 740 aaPredicted RBP13.37□□□□□ -0.27
ATP7B-211ENST00000634308 TONSLQ96HA7 1378 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 1319.3 ms