RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
CDK7-215ENST00000629350 NPM3O75607 178 aaKnown RBP25.39■■□□□ 1.66
CDK7-215ENST00000629350 ADAMTS12P58397 1594 aa25.37■■□□□ 1.65
CDK7-215ENST00000629350 ARAP1Q96P48 1450 aa25.35■■□□□ 1.65
CDK7-215ENST00000629350 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
CDK7-215ENST00000629350 CEP170Q5SW79 1584 aa25.24■■□□□ 1.63
CDK7-215ENST00000629350 GRIN2AQ12879 1464 aa25.23■■□□□ 1.63
CDK7-215ENST00000629350 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.62
CDK7-215ENST00000629350 ERCC6L2Q5T890 1561 aa25.18■■□□□ 1.62
CDK7-215ENST00000629350 CYB5RLQ6IPT4 315 aa25.15■■□□□ 1.62
CDK7-215ENST00000629350 NUP160Q12769 1436 aa25.13■■□□□ 1.61
CDK7-215ENST00000629350 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
CDK7-215ENST00000629350 SHROOM2Q13796 1616 aa25.08■■□□□ 1.61
CDK7-215ENST00000629350 RNF216Q9NWF9 866 aaPredicted RBP25.07■■□□□ 1.6
CDK7-215ENST00000629350 RUSC2Q8N2Y8 1516 aa25.02■■□□□ 1.6
CDK7-215ENST00000629350 HOXD11P31277 338 aaPredicted RBP24.96■■□□□ 1.59
CDK7-215ENST00000629350 CUL7Q14999 1698 aa24.94■■□□□ 1.58
CDK7-215ENST00000629350 IGF1RP08069 1367 aa24.93■■□□□ 1.58
CDK7-215ENST00000629350 KIF27Q86VH2 1401 aa24.92■■□□□ 1.58
CDK7-215ENST00000629350 PRG4Q92954 1404 aaPredicted RBP24.81■■□□□ 1.56
CDK7-215ENST00000629350 KIAA0586Q9BVV6 1533 aa24.73■■□□□ 1.55
CDK7-215ENST00000629350 CARMIL1Q5VZK9 1371 aa24.71■■□□□ 1.55
CDK7-215ENST00000629350 TRHP20396 242 aaPredicted RBP24.71■■□□□ 1.55
CDK7-215ENST00000629350 POTEDQ86YR6 584 aa24.71■■□□□ 1.55
CDK7-215ENST00000629350 JPH4Q96JJ6 628 aa24.71■■□□□ 1.55
CDK7-215ENST00000629350 SLC4A1APQ9BWU0 796 aaKnown RBP24.69■■□□□ 1.54
CDK7-215ENST00000629350 ADCY10Q96PN6 1610 aa24.65■■□□□ 1.54
CDK7-215ENST00000629350 IQGAP2Q13576 1575 aa24.63■■□□□ 1.53
CDK7-215ENST00000629350 KIF13AQ9H1H9 1805 aa24.61■■□□□ 1.53
CDK7-215ENST00000629350 RAPGEF2Q9Y4G8 1499 aa24.56■■□□□ 1.52
CDK7-215ENST00000629350 CTTNBP2Q8WZ74 1663 aa24.53■■□□□ 1.52
CDK7-215ENST00000629350 DISP1Q96F81 1524 aa24.52■■□□□ 1.52
CDK7-215ENST00000629350 UGGT2Q9NYU1 1516 aa24.46■■□□□ 1.51
CDK7-215ENST00000629350 PRXQ9BXM0 1461 aa24.45■■□□□ 1.51
CDK7-215ENST00000629350 KIAA0556O60303 1618 aa24.45■■□□□ 1.5
CDK7-215ENST00000629350 MAPKBP1O60336 1514 aa24.45■■□□□ 1.5
CDK7-215ENST00000629350 DCAF8L1A6NGE4 600 aa24.44■■□□□ 1.5
CDK7-215ENST00000629350 DIP2BQ9P265 1576 aa24.43■■□□□ 1.5
CDK7-215ENST00000629350 TTBK1Q5TCY1 1321 aaPredicted RBP24.4■■□□□ 1.5
CDK7-215ENST00000629350 PTPRGP23470 1445 aa24.39■■□□□ 1.5
CDK7-215ENST00000629350 TNIKQ9UKE5 1360 aa24.38■■□□□ 1.49
CDK7-215ENST00000629350 CARMIL2Q6F5E8 1435 aa24.37■■□□□ 1.49
CDK7-215ENST00000629350 ABCC10Q5T3U5 1492 aa24.35■■□□□ 1.49
CDK7-215ENST00000629350 ABCC2Q92887 1545 aa24.32■■□□□ 1.48
CDK7-215ENST00000629350 UHRF1BP1LA0JNW5 1464 aa24.28■■□□□ 1.48
CDK7-215ENST00000629350 TSPOAP1O95153 1857 aa24.28■■□□□ 1.48
CDK7-215ENST00000629350 ZCCHC11Q5TAX3 1644 aaKnown RBP24.27■■□□□ 1.48
CDK7-215ENST00000629350 UACAQ9BZF9 1416 aa24.26■■□□□ 1.47
CDK7-215ENST00000629350 PPRC1Q5VV67 1664 aaKnown RBP24.22■■□□□ 1.47
CDK7-215ENST00000629350 PLB1Q6P1J6 1458 aa24.22■■□□□ 1.47
CDK7-215ENST00000629350 FAM69CQ0P6D2 419 aa24.21■■□□□ 1.47
CDK7-215ENST00000629350 KDM5BQ9UGL1 1544 aa24.2■■□□□ 1.47
CDK7-215ENST00000629350 ASXL2Q76L83 1435 aa24.2■■□□□ 1.46
CDK7-215ENST00000629350 ABCA8O94911 1581 aa24.2■■□□□ 1.46
CDK7-215ENST00000629350 NPM1P06748 294 aaKnown RBP eCLIP24.19■■□□□ 1.46
CDK7-215ENST00000629350 SAMD9Q5K651 1589 aa24.18■■□□□ 1.46
CDK7-215ENST00000629350 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
CDK7-215ENST00000629350 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
CDK7-215ENST00000629350 GOLGA3Q08378 1498 aa24.15■■□□□ 1.46
CDK7-215ENST00000629350 FAM9AQ8IZU1 332 aaPredicted RBP24.14■■□□□ 1.45
CDK7-215ENST00000629350 EEA1Q15075 1411 aa24.13■■□□□ 1.45
CDK7-215ENST00000629350 KIF21BO75037 1637 aa24.13■■□□□ 1.45
CDK7-215ENST00000629350 GLI2P10070 1586 aa24.12■■□□□ 1.45
CDK7-215ENST00000629350 MAP3K4Q9Y6R4 1608 aa24.09■■□□□ 1.45
CDK7-215ENST00000629350 EPRSP07814 1512 aaKnown RBP24.08■■□□□ 1.45
CDK7-215ENST00000629350 KDM6BO15054 1643 aa24.07■■□□□ 1.44
CDK7-215ENST00000629350 P3H3Q8IVL6 736 aa24.04■■□□□ 1.44
CDK7-215ENST00000629350 WDR7Q9Y4E6 1490 aa24.01■■□□□ 1.43
CDK7-215ENST00000629350 SLC4A2P04920 1241 aa23.98■■□□□ 1.43
CDK7-215ENST00000629350 RAPGEF6Q8TEU7 1601 aa23.98■■□□□ 1.43
CDK7-215ENST00000629350 FHOD3Q2V2M9 1422 aa23.97■■□□□ 1.43
CDK7-215ENST00000629350 ARID3CA6NKF2 412 aa23.95■■□□□ 1.42
CDK7-215ENST00000629350 RANGAP1P46060 587 aaPredicted RBP23.94■■□□□ 1.42
CDK7-215ENST00000629350 ZBTB22O15209 634 aa23.93■■□□□ 1.42
CDK7-215ENST00000629350 ATP10BO94823 1461 aa23.93■■□□□ 1.42
CDK7-215ENST00000629350 COL17A1Q9UMD9 1497 aaPredicted RBP23.93■■□□□ 1.42
CDK7-215ENST00000629350 CFAP43Q8NDM7 1665 aa23.9■■□□□ 1.42
CDK7-215ENST00000629350 NUP153P49790 1475 aaKnown RBP23.89■■□□□ 1.42
CDK7-215ENST00000629350 EFCAB5A4FU69 1503 aa23.87■■□□□ 1.41
CDK7-215ENST00000629350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.83■■□□□ 1.41
CDK7-215ENST00000629350 ABCA9Q8IUA7 1624 aa23.8■■□□□ 1.4
CDK7-215ENST00000629350 KCNH8Q96L42 1107 aa23.78■■□□□ 1.4
CDK7-215ENST00000629350 FOXD4L1Q9NU39 408 aa23.78■■□□□ 1.4
CDK7-215ENST00000629350 TEX14Q8IWB6 1497 aa23.78■■□□□ 1.4
CDK7-215ENST00000629350 ARHGAP35Q9NRY4 1499 aa23.78■■□□□ 1.4
CDK7-215ENST00000629350 MAGI3Q5TCQ9 1506 aa23.78■■□□□ 1.4
CDK7-215ENST00000629350 CD109Q6YHK3 1445 aa23.76■■□□□ 1.39
CDK7-215ENST00000629350 CDK13Q14004 1512 aaKnown RBP23.75■■□□□ 1.39
CDK7-215ENST00000629350 LRRIQ1Q96JM4 1722 aa23.75■■□□□ 1.39
CDK7-215ENST00000629350 UBTFP17480 764 aaKnown RBP23.69■■□□□ 1.38
CDK7-215ENST00000629350 TTC37Q6PGP7 1564 aa23.68■■□□□ 1.38
CDK7-215ENST00000629350 KDM4FA0A1W2PPD8 638 aa23.65■■□□□ 1.38
CDK7-215ENST00000629350 FRMPD1Q5SYB0 1578 aa23.64■■□□□ 1.37
CDK7-215ENST00000629350 HECW1Q76N89 1606 aa23.63■■□□□ 1.37
CDK7-215ENST00000629350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.62■■□□□ 1.37
CDK7-215ENST00000629350 PCF11O94913 1555 aaKnown RBP23.61■■□□□ 1.37
CDK7-215ENST00000629350 ADGRL1O94910 1474 aa23.6■■□□□ 1.37
CDK7-215ENST00000629350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.59■■□□□ 1.37
CDK7-215ENST00000629350 HNRNPUL2Q1KMD3 747 aaKnown RBP23.59■■□□□ 1.37
CDK7-215ENST00000629350 ARAP3Q8WWN8 1544 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms