RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 KDM6BO15054 1643 aa21.91■■□□□ 1.1
CHD2-218ENST00000629346 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.09
CHD2-218ENST00000629346 DIP2BQ9P265 1576 aa21.86■■□□□ 1.09
CHD2-218ENST00000629346 MAPKBP1O60336 1514 aa21.84■■□□□ 1.09
CHD2-218ENST00000629346 TSPOAP1O95153 1857 aa21.81■■□□□ 1.08
CHD2-218ENST00000629346 ERICH3Q5RHP9 1530 aa21.77■■□□□ 1.08
CHD2-218ENST00000629346 ADCY10Q96PN6 1610 aa21.77■■□□□ 1.07
CHD2-218ENST00000629346 RUSC2Q8N2Y8 1516 aa21.7■■□□□ 1.06
CHD2-218ENST00000629346 ADGRL1O94910 1474 aa21.68■■□□□ 1.06
CHD2-218ENST00000629346 TOP2BQ02880 1626 aa21.68■■□□□ 1.06
CHD2-218ENST00000629346 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
CHD2-218ENST00000629346 TTBK1Q5TCY1 1321 aaPredicted RBP21.64■■□□□ 1.05
CHD2-218ENST00000629346 HECW2Q9P2P5 1572 aa21.61■■□□□ 1.05
CHD2-218ENST00000629346 KIAA0586Q9BVV6 1533 aa21.54■■□□□ 1.04
CHD2-218ENST00000629346 PTPRGP23470 1445 aa21.54■■□□□ 1.04
CHD2-218ENST00000629346 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
CHD2-218ENST00000629346 PPRC1Q5VV67 1664 aaKnown RBP21.5■■□□□ 1.03
CHD2-218ENST00000629346 ASXL2Q76L83 1435 aa21.5■■□□□ 1.03
CHD2-218ENST00000629346 COL17A1Q9UMD9 1497 aaPredicted RBP21.49■■□□□ 1.03
CHD2-218ENST00000629346 PLB1Q6P1J6 1458 aa21.46■■□□□ 1.03
CHD2-218ENST00000629346 ABCC2Q92887 1545 aa21.46■■□□□ 1.03
CHD2-218ENST00000629346 GLI2P10070 1586 aa21.44■■□□□ 1.02
CHD2-218ENST00000629346 FBXO41Q8TF61 875 aa21.42■■□□□ 1.02
CHD2-218ENST00000629346 TNIKQ9UKE5 1360 aa21.4■■□□□ 1.02
CHD2-218ENST00000629346 IGF1RP08069 1367 aa21.39■■□□□ 1.02
CHD2-218ENST00000629346 CUL7Q14999 1698 aa21.39■■□□□ 1.01
CHD2-218ENST00000629346 CARMIL2Q6F5E8 1435 aa21.38■■□□□ 1.01
CHD2-218ENST00000629346 EPRSP07814 1512 aaKnown RBP21.34■■□□□ 1.01
CHD2-218ENST00000629346 TEX14Q8IWB6 1497 aa21.33■■□□□ 1.01
CHD2-218ENST00000629346 MAP3K4Q9Y6R4 1608 aa21.32■■□□□ 1
CHD2-218ENST00000629346 UACAQ9BZF9 1416 aa21.31■■□□□ 1
CHD2-218ENST00000629346 UHRF1BP1LA0JNW5 1464 aa21.31■■□□□ 1
CHD2-218ENST00000629346 KIF27Q86VH2 1401 aa21.28■■□□□ 1
CHD2-218ENST00000629346 KDM5BQ9UGL1 1544 aa21.24■□□□□ 0.99
CHD2-218ENST00000629346 CARMIL1Q5VZK9 1371 aa21.23■□□□□ 0.99
CHD2-218ENST00000629346 IQGAP2Q13576 1575 aa21.21■□□□□ 0.99
CHD2-218ENST00000629346 ZCCHC11Q5TAX3 1644 aaKnown RBP21.21■□□□□ 0.99
CHD2-218ENST00000629346 DISP1Q96F81 1524 aa21.19■□□□□ 0.98
CHD2-218ENST00000629346 KCNH8Q96L42 1107 aa21.16■□□□□ 0.98
CHD2-218ENST00000629346 WDR7Q9Y4E6 1490 aa21.14■□□□□ 0.98
CHD2-218ENST00000629346 KIF21BO75037 1637 aa21.14■□□□□ 0.97
CHD2-218ENST00000629346 CD109Q6YHK3 1445 aa21.13■□□□□ 0.97
CHD2-218ENST00000629346 LMTK3Q96Q04 1460 aa21.08■□□□□ 0.97
CHD2-218ENST00000629346 MAGI3Q5TCQ9 1506 aa21.08■□□□□ 0.96
CHD2-218ENST00000629346 PTPRMP28827 1452 aa21.05■□□□□ 0.96
CHD2-218ENST00000629346 UGGT2Q9NYU1 1516 aa21.04■□□□□ 0.96
CHD2-218ENST00000629346 CFAP43Q8NDM7 1665 aa21.03■□□□□ 0.96
CHD2-218ENST00000629346 KIAA0556O60303 1618 aa21.03■□□□□ 0.96
CHD2-218ENST00000629346 ADAMTSL3P82987 1691 aa20.96■□□□□ 0.95
CHD2-218ENST00000629346 PCF11O94913 1555 aaKnown RBP20.95■□□□□ 0.94
CHD2-218ENST00000629346 ARID4BQ4LE39 1312 aaPredicted RBP20.95■□□□□ 0.94
CHD2-218ENST00000629346 ARAP3Q8WWN8 1544 aa20.94■□□□□ 0.94
CHD2-218ENST00000629346 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
CHD2-218ENST00000629346 ARID3CA6NKF2 412 aa20.93■□□□□ 0.94
CHD2-218ENST00000629346 RAPGEF3O95398 923 aa20.93■□□□□ 0.94
CHD2-218ENST00000629346 HSPA2P54652 639 aa20.91■□□□□ 0.94
CHD2-218ENST00000629346 ILDR2Q71H61 639 aa20.91■□□□□ 0.94
CHD2-218ENST00000629346 PLPPR3Q6T4P5 718 aa20.9■□□□□ 0.94
CHD2-218ENST00000629346 CERKQ8TCT0 537 aa20.88■□□□□ 0.93
CHD2-218ENST00000629346 ABCA8O94911 1581 aa20.88■□□□□ 0.93
CHD2-218ENST00000629346 DISP3Q9P2K9 1392 aa20.87■□□□□ 0.93
CHD2-218ENST00000629346 MADDQ8WXG6 1647 aa20.87■□□□□ 0.93
CHD2-218ENST00000629346 SOCS7O14512 581 aa20.86■□□□□ 0.93
CHD2-218ENST00000629346 BCORL1Q5H9F3 1711 aa20.85■□□□□ 0.93
CHD2-218ENST00000629346 GOLGA3Q08378 1498 aa20.82■□□□□ 0.92
CHD2-218ENST00000629346 PHLDB1Q86UU1 1377 aa20.81■□□□□ 0.92
CHD2-218ENST00000629346 RIMS1Q86UR5 1692 aaKnown RBP20.79■□□□□ 0.92
CHD2-218ENST00000629346 ATP10BO94823 1461 aa20.75■□□□□ 0.91
CHD2-218ENST00000629346 CTTNBP2Q8WZ74 1663 aa20.75■□□□□ 0.91
CHD2-218ENST00000629346 P3H3Q8IVL6 736 aa20.75■□□□□ 0.91
CHD2-218ENST00000629346 ABCA9Q8IUA7 1624 aa20.75■□□□□ 0.91
CHD2-218ENST00000629346 FAM9AQ8IZU1 332 aaPredicted RBP20.74■□□□□ 0.91
CHD2-218ENST00000629346 NEO1Q92859 1461 aa20.73■□□□□ 0.91
CHD2-218ENST00000629346 FRMPD1Q5SYB0 1578 aa20.72■□□□□ 0.91
CHD2-218ENST00000629346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
CHD2-218ENST00000629346 HNRNPUL2Q1KMD3 747 aaKnown RBP20.71■□□□□ 0.91
CHD2-218ENST00000629346 MLECQ14165 292 aa20.67■□□□□ 0.9
CHD2-218ENST00000629346 ARHGEF40Q8TER5 1519 aa20.65■□□□□ 0.9
CHD2-218ENST00000629346 POGZQ7Z3K3 1410 aa20.63■□□□□ 0.89
CHD2-218ENST00000629346 DENND4BO75064 1496 aaPredicted RBP20.62■□□□□ 0.89
CHD2-218ENST00000629346 FANCAO15360 1455 aa20.61■□□□□ 0.89
CHD2-218ENST00000629346 AKNAQ7Z591 1439 aa20.6■□□□□ 0.89
CHD2-218ENST00000629346 SPATA31D1Q6ZQQ2 1576 aa20.58■□□□□ 0.88
CHD2-218ENST00000629346 RICTORQ6R327 1708 aa20.57■□□□□ 0.88
CHD2-218ENST00000629346 YEATS2Q9ULM3 1422 aa20.56■□□□□ 0.88
CHD2-218ENST00000629346 SIGLEC1Q9BZZ2 1709 aa20.56■□□□□ 0.88
CHD2-218ENST00000629346 FHOD3Q2V2M9 1422 aa20.54■□□□□ 0.88
CHD2-218ENST00000629346 CEBPAP49715 358 aaPredicted RBP20.53■□□□□ 0.88
CHD2-218ENST00000629346 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
CHD2-218ENST00000629346 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
CHD2-218ENST00000629346 ZFYVE16Q7Z3T8 1539 aa20.53■□□□□ 0.88
CHD2-218ENST00000629346 FER1L4A9Z1Z3 1794 aa20.51■□□□□ 0.87
CHD2-218ENST00000629346 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
CHD2-218ENST00000629346 PLEKHD1A6NEE1 506 aa20.5■□□□□ 0.87
CHD2-218ENST00000629346 TTC37Q6PGP7 1564 aa20.49■□□□□ 0.87
CHD2-218ENST00000629346 EFCAB5A4FU69 1503 aa20.48■□□□□ 0.87
CHD2-218ENST00000629346 RANGAP1P46060 587 aaPredicted RBP20.47■□□□□ 0.87
CHD2-218ENST00000629346 NUP153P49790 1475 aaKnown RBP20.47■□□□□ 0.87
CHD2-218ENST00000629346 ZMYM4Q5VZL5 1548 aa20.47■□□□□ 0.87
CHD2-218ENST00000629346 PREX1Q8TCU6 1659 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms