RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 TRHP20396 242 aaPredicted RBP29.52■■■□□ 2.32
SPTAN1-214ENST00000628614 PRG4Q92954 1404 aaPredicted RBP29.52■■■□□ 2.32
SPTAN1-214ENST00000628614 CARMIL1Q5VZK9 1371 aa29.5■■■□□ 2.31
SPTAN1-214ENST00000628614 KIAA0586Q9BVV6 1533 aa29.47■■■□□ 2.31
SPTAN1-214ENST00000628614 RAPGEF2Q9Y4G8 1499 aa29.29■■■□□ 2.28
SPTAN1-214ENST00000628614 IQGAP2Q13576 1575 aa29.25■■■□□ 2.27
SPTAN1-214ENST00000628614 CARMIL2Q6F5E8 1435 aa29.19■■■□□ 2.26
SPTAN1-214ENST00000628614 NPM1P06748 294 aaKnown RBP eCLIP29.12■■■□□ 2.25
SPTAN1-214ENST00000628614 ADCY10Q96PN6 1610 aa29.12■■■□□ 2.25
SPTAN1-214ENST00000628614 PTPRGP23470 1445 aa29.11■■■□□ 2.25
SPTAN1-214ENST00000628614 TNIKQ9UKE5 1360 aa29.11■■■□□ 2.25
SPTAN1-214ENST00000628614 PRXQ9BXM0 1461 aa29.08■■■□□ 2.25
SPTAN1-214ENST00000628614 UGGT2Q9NYU1 1516 aa29.08■■■□□ 2.25
SPTAN1-214ENST00000628614 DISP1Q96F81 1524 aa29.05■■■□□ 2.24
SPTAN1-214ENST00000628614 MAPKBP1O60336 1514 aa29.04■■■□□ 2.24
SPTAN1-214ENST00000628614 TTBK1Q5TCY1 1321 aaPredicted RBP29.01■■■□□ 2.23
SPTAN1-214ENST00000628614 CTTNBP2Q8WZ74 1663 aa29.01■■■□□ 2.23
SPTAN1-214ENST00000628614 KIAA0556O60303 1618 aa28.97■■■□□ 2.23
SPTAN1-214ENST00000628614 ABCC10Q5T3U5 1492 aa28.97■■■□□ 2.23
SPTAN1-214ENST00000628614 KIF13AQ9H1H9 1805 aa28.97■■■□□ 2.23
SPTAN1-214ENST00000628614 EEA1Q15075 1411 aa28.94■■■□□ 2.22
SPTAN1-214ENST00000628614 CSRNP3Q8WYN3 585 aa28.93■■■□□ 2.22
SPTAN1-214ENST00000628614 ABCC2Q92887 1545 aa28.93■■■□□ 2.22
SPTAN1-214ENST00000628614 UHRF1BP1LA0JNW5 1464 aa28.92■■■□□ 2.22
SPTAN1-214ENST00000628614 UACAQ9BZF9 1416 aa28.91■■■□□ 2.22
SPTAN1-214ENST00000628614 FAM69CQ0P6D2 419 aa28.9■■■□□ 2.22
SPTAN1-214ENST00000628614 DIP2BQ9P265 1576 aa28.9■■■□□ 2.22
SPTAN1-214ENST00000628614 GOLGA3Q08378 1498 aa28.9■■■□□ 2.22
SPTAN1-214ENST00000628614 PLB1Q6P1J6 1458 aa28.78■■■□□ 2.2
SPTAN1-214ENST00000628614 KDM5BQ9UGL1 1544 aa28.78■■■□□ 2.2
SPTAN1-214ENST00000628614 ASXL2Q76L83 1435 aa28.77■■■□□ 2.2
SPTAN1-214ENST00000628614 ZCCHC11Q5TAX3 1644 aaKnown RBP28.7■■■□□ 2.19
SPTAN1-214ENST00000628614 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.18
SPTAN1-214ENST00000628614 FAM9AQ8IZU1 332 aaPredicted RBP28.7■■■□□ 2.18
SPTAN1-214ENST00000628614 ABCA8O94911 1581 aa28.67■■■□□ 2.18
SPTAN1-214ENST00000628614 GLI2P10070 1586 aa28.67■■■□□ 2.18
SPTAN1-214ENST00000628614 KIF21BO75037 1637 aa28.65■■■□□ 2.18
SPTAN1-214ENST00000628614 SAMD9Q5K651 1589 aa28.63■■■□□ 2.17
SPTAN1-214ENST00000628614 EPRSP07814 1512 aaKnown RBP28.61■■■□□ 2.17
SPTAN1-214ENST00000628614 TSPOAP1O95153 1857 aa28.61■■■□□ 2.17
SPTAN1-214ENST00000628614 P3H3Q8IVL6 736 aa28.59■■■□□ 2.17
SPTAN1-214ENST00000628614 WDR7Q9Y4E6 1490 aa28.58■■■□□ 2.17
SPTAN1-214ENST00000628614 KDM6BO15054 1643 aa28.55■■■□□ 2.16
SPTAN1-214ENST00000628614 MAP3K4Q9Y6R4 1608 aa28.5■■■□□ 2.15
SPTAN1-214ENST00000628614 PPRC1Q5VV67 1664 aaKnown RBP28.49■■■□□ 2.15
SPTAN1-214ENST00000628614 RANGAP1P46060 587 aaPredicted RBP28.47■■■□□ 2.15
SPTAN1-214ENST00000628614 EFCAB5A4FU69 1503 aa28.45■■■□□ 2.15
SPTAN1-214ENST00000628614 RAPGEF6Q8TEU7 1601 aa28.44■■■□□ 2.14
SPTAN1-214ENST00000628614 TEX14Q8IWB6 1497 aa28.44■■■□□ 2.14
SPTAN1-214ENST00000628614 FHOD3Q2V2M9 1422 aa28.43■■■□□ 2.14
SPTAN1-214ENST00000628614 ATP10BO94823 1461 aa28.42■■■□□ 2.14
SPTAN1-214ENST00000628614 UBTFP17480 764 aaKnown RBP28.39■■■□□ 2.14
SPTAN1-214ENST00000628614 ARID3CA6NKF2 412 aa28.38■■■□□ 2.13
SPTAN1-214ENST00000628614 KCNH8Q96L42 1107 aa28.38■■■□□ 2.13
SPTAN1-214ENST00000628614 AEBP2Q6ZN18 517 aaPredicted RBP28.37■■■□□ 2.13
SPTAN1-214ENST00000628614 CFAP43Q8NDM7 1665 aa28.36■■■□□ 2.13
SPTAN1-214ENST00000628614 EHMT2Q96KQ7 1210 aa28.35■■■□□ 2.13
SPTAN1-214ENST00000628614 CD109Q6YHK3 1445 aa28.35■■■□□ 2.13
SPTAN1-214ENST00000628614 NUP153P49790 1475 aaKnown RBP28.34■■■□□ 2.13
SPTAN1-214ENST00000628614 MAGI3Q5TCQ9 1506 aa28.32■■■□□ 2.12
SPTAN1-214ENST00000628614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.28■■■□□ 2.12
SPTAN1-214ENST00000628614 HNRNPUL2Q1KMD3 747 aaKnown RBP28.28■■■□□ 2.12
SPTAN1-214ENST00000628614 COL17A1Q9UMD9 1497 aaPredicted RBP28.27■■■□□ 2.12
SPTAN1-214ENST00000628614 ABCA9Q8IUA7 1624 aa28.21■■■□□ 2.11
SPTAN1-214ENST00000628614 ARHGAP35Q9NRY4 1499 aa28.21■■■□□ 2.11
SPTAN1-214ENST00000628614 FMN1Q68DA7 1419 aa28.19■■■□□ 2.1
SPTAN1-214ENST00000628614 PLEKHD1A6NEE1 506 aa28.15■■■□□ 2.1
SPTAN1-214ENST00000628614 PHLDB1Q86UU1 1377 aa28.11■■■□□ 2.09
SPTAN1-214ENST00000628614 HECW1Q76N89 1606 aa28.1■■■□□ 2.09
SPTAN1-214ENST00000628614 CDK13Q14004 1512 aaKnown RBP28.08■■■□□ 2.09
SPTAN1-214ENST00000628614 ARAP3Q8WWN8 1544 aa28.08■■■□□ 2.09
SPTAN1-214ENST00000628614 NEO1Q92859 1461 aa28.06■■■□□ 2.08
SPTAN1-214ENST00000628614 KDM4FA0A1W2PPD8 638 aa28.05■■■□□ 2.08
SPTAN1-214ENST00000628614 ATP1B4Q9UN42 357 aaPredicted RBP28.04■■■□□ 2.08
SPTAN1-214ENST00000628614 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28■■■□□ 2.07
SPTAN1-214ENST00000628614 CDK11AQ9UQ88 783 aaPredicted RBP27.97■■■□□ 2.07
SPTAN1-214ENST00000628614 ADGRL1O94910 1474 aa27.96■■■□□ 2.07
SPTAN1-214ENST00000628614 TTC37Q6PGP7 1564 aa27.96■■■□□ 2.07
SPTAN1-214ENST00000628614 CFAP74Q9C0B2 1584 aa27.94■■■□□ 2.06
SPTAN1-214ENST00000628614 CLIP1P30622 1438 aa27.92■■■□□ 2.06
SPTAN1-214ENST00000628614 CASKIN1Q8WXD9 1431 aa27.92■■■□□ 2.06
SPTAN1-214ENST00000628614 FANCAO15360 1455 aa27.91■■■□□ 2.06
SPTAN1-214ENST00000628614 PCF11O94913 1555 aaKnown RBP27.9■■■□□ 2.06
SPTAN1-214ENST00000628614 RAPGEF3O95398 923 aa27.89■■■□□ 2.06
SPTAN1-214ENST00000628614 AKNAQ7Z591 1439 aa27.88■■■□□ 2.05
SPTAN1-214ENST00000628614 CCDC18Q5T9S5 1454 aa27.88■■■□□ 2.05
SPTAN1-214ENST00000628614 TROQ12816 1431 aaPredicted RBP27.87■■■□□ 2.05
SPTAN1-214ENST00000628614 FRMPD1Q5SYB0 1578 aa27.86■■■□□ 2.05
SPTAN1-214ENST00000628614 KIF14Q15058 1648 aa27.85■■■□□ 2.05
SPTAN1-214ENST00000628614 LRRIQ1Q96JM4 1722 aa27.85■■■□□ 2.05
SPTAN1-214ENST00000628614 PLCH2O75038 1416 aa27.84■■■□□ 2.05
SPTAN1-214ENST00000628614 DENND4BO75064 1496 aaPredicted RBP27.84■■■□□ 2.05
SPTAN1-214ENST00000628614 FYCO1Q9BQS8 1478 aa27.83■■■□□ 2.05
SPTAN1-214ENST00000628614 MYO5CQ9NQX4 1742 aa27.78■■■□□ 2.04
SPTAN1-214ENST00000628614 RICTORQ6R327 1708 aa27.78■■■□□ 2.04
SPTAN1-214ENST00000628614 EFCAB2Q5VUJ9 269 aa27.74■■■□□ 2.03
SPTAN1-214ENST00000628614 ARHGEF40Q8TER5 1519 aa27.73■■■□□ 2.03
SPTAN1-214ENST00000628614 ZMYM4Q5VZL5 1548 aa27.72■■■□□ 2.03
SPTAN1-214ENST00000628614 SCAPERQ9BY12 1400 aa27.71■■■□□ 2.03
SPTAN1-214ENST00000628614 CEP162Q5TB80 1403 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms