RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 RUSC2Q8N2Y8 1516 aa28.38■■■□□ 2.13
LINC00628-201ENST00000628516 CUL7Q14999 1698 aa28.37■■■□□ 2.13
LINC00628-201ENST00000628516 CARMIL1Q5VZK9 1371 aa28.3■■■□□ 2.12
LINC00628-201ENST00000628516 KIAA0586Q9BVV6 1533 aa28.29■■■□□ 2.12
LINC00628-201ENST00000628516 NPM1P06748 294 aaKnown RBP eCLIP28.1■■■□□ 2.09
LINC00628-201ENST00000628516 RAPGEF2Q9Y4G8 1499 aa28.05■■■□□ 2.08
LINC00628-201ENST00000628516 IQGAP2Q13576 1575 aa28.04■■■□□ 2.08
LINC00628-201ENST00000628516 ADCY10Q96PN6 1610 aa28.03■■■□□ 2.08
LINC00628-201ENST00000628516 CARMIL2Q6F5E8 1435 aa28.03■■■□□ 2.08
LINC00628-201ENST00000628516 TTBK1Q5TCY1 1321 aaPredicted RBP28.03■■■□□ 2.08
LINC00628-201ENST00000628516 PTPRGP23470 1445 aa28.01■■■□□ 2.08
LINC00628-201ENST00000628516 TNIKQ9UKE5 1360 aa27.98■■■□□ 2.07
LINC00628-201ENST00000628516 KIF13AQ9H1H9 1805 aa27.97■■■□□ 2.07
LINC00628-201ENST00000628516 MAPKBP1O60336 1514 aa27.96■■■□□ 2.07
LINC00628-201ENST00000628516 FAM69CQ0P6D2 419 aa27.95■■■□□ 2.06
LINC00628-201ENST00000628516 ABCC10Q5T3U5 1492 aa27.93■■■□□ 2.06
LINC00628-201ENST00000628516 AEBP2Q6ZN18 517 aaPredicted RBP27.9■■■□□ 2.06
LINC00628-201ENST00000628516 DISP1Q96F81 1524 aa27.89■■■□□ 2.06
LINC00628-201ENST00000628516 UGGT2Q9NYU1 1516 aa27.87■■■□□ 2.05
LINC00628-201ENST00000628516 DIP2BQ9P265 1576 aa27.85■■■□□ 2.05
LINC00628-201ENST00000628516 ABCC2Q92887 1545 aa27.82■■■□□ 2.04
LINC00628-201ENST00000628516 UACAQ9BZF9 1416 aa27.8■■■□□ 2.04
LINC00628-201ENST00000628516 PRXQ9BXM0 1461 aa27.8■■■□□ 2.04
LINC00628-201ENST00000628516 KIAA0556O60303 1618 aa27.78■■■□□ 2.04
LINC00628-201ENST00000628516 UHRF1BP1LA0JNW5 1464 aa27.77■■■□□ 2.04
LINC00628-201ENST00000628516 CTTNBP2Q8WZ74 1663 aa27.77■■■□□ 2.04
LINC00628-201ENST00000628516 ASXL2Q76L83 1435 aa27.71■■■□□ 2.03
LINC00628-201ENST00000628516 PLB1Q6P1J6 1458 aa27.69■■■□□ 2.02
LINC00628-201ENST00000628516 CSRNP3Q8WYN3 585 aa27.68■■■□□ 2.02
LINC00628-201ENST00000628516 GOLGA3Q08378 1498 aa27.68■■■□□ 2.02
LINC00628-201ENST00000628516 KDM5BQ9UGL1 1544 aa27.66■■■□□ 2.02
LINC00628-201ENST00000628516 TSPOAP1O95153 1857 aa27.66■■■□□ 2.02
LINC00628-201ENST00000628516 ZCCHC11Q5TAX3 1644 aaKnown RBP27.59■■■□□ 2.01
LINC00628-201ENST00000628516 GLI2P10070 1586 aa27.58■■■□□ 2.01
LINC00628-201ENST00000628516 EEA1Q15075 1411 aa27.57■■■□□ 2
LINC00628-201ENST00000628516 KDM6BO15054 1643 aa27.56■■■□□ 2
LINC00628-201ENST00000628516 EPRSP07814 1512 aaKnown RBP27.54■■■□□ 2
LINC00628-201ENST00000628516 P3H3Q8IVL6 736 aa27.52■■■□□ 2
LINC00628-201ENST00000628516 FAM9AQ8IZU1 332 aaPredicted RBP27.52■■■□□ 2
LINC00628-201ENST00000628516 ABCA8O94911 1581 aa27.52■■■□□ 2
LINC00628-201ENST00000628516 WDR7Q9Y4E6 1490 aa27.47■■□□□ 1.99
LINC00628-201ENST00000628516 PPRC1Q5VV67 1664 aaKnown RBP27.46■■□□□ 1.99
LINC00628-201ENST00000628516 MAP3K4Q9Y6R4 1608 aa27.42■■□□□ 1.98
LINC00628-201ENST00000628516 RANGAP1P46060 587 aaPredicted RBP27.4■■□□□ 1.98
LINC00628-201ENST00000628516 SAMD9Q5K651 1589 aa27.39■■□□□ 1.98
LINC00628-201ENST00000628516 KCNH8Q96L42 1107 aa27.39■■□□□ 1.98
LINC00628-201ENST00000628516 ARID3CA6NKF2 412 aa27.38■■□□□ 1.97
LINC00628-201ENST00000628516 TEX14Q8IWB6 1497 aa27.38■■□□□ 1.97
LINC00628-201ENST00000628516 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
LINC00628-201ENST00000628516 ATP10BO94823 1461 aa27.32■■□□□ 1.96
LINC00628-201ENST00000628516 KIF21BO75037 1637 aa27.31■■□□□ 1.96
LINC00628-201ENST00000628516 CD109Q6YHK3 1445 aa27.3■■□□□ 1.96
LINC00628-201ENST00000628516 COL17A1Q9UMD9 1497 aaPredicted RBP27.3■■□□□ 1.96
LINC00628-201ENST00000628516 FHOD3Q2V2M9 1422 aa27.27■■□□□ 1.96
LINC00628-201ENST00000628516 RAPGEF6Q8TEU7 1601 aa27.27■■□□□ 1.96
LINC00628-201ENST00000628516 CFAP43Q8NDM7 1665 aa27.26■■□□□ 1.95
LINC00628-201ENST00000628516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.24■■□□□ 1.95
LINC00628-201ENST00000628516 HNRNPUL2Q1KMD3 747 aaKnown RBP27.24■■□□□ 1.95
LINC00628-201ENST00000628516 EHMT2Q96KQ7 1210 aa27.24■■□□□ 1.95
LINC00628-201ENST00000628516 MAGI3Q5TCQ9 1506 aa27.24■■□□□ 1.95
LINC00628-201ENST00000628516 KDM4FA0A1W2PPD8 638 aa27.23■■□□□ 1.95
LINC00628-201ENST00000628516 UBTFP17480 764 aaKnown RBP27.2■■□□□ 1.94
LINC00628-201ENST00000628516 EFCAB5A4FU69 1503 aa27.18■■□□□ 1.94
LINC00628-201ENST00000628516 NUP153P49790 1475 aaKnown RBP27.18■■□□□ 1.94
LINC00628-201ENST00000628516 ABCA9Q8IUA7 1624 aa27.09■■□□□ 1.93
LINC00628-201ENST00000628516 PLEKHD1A6NEE1 506 aa27.06■■□□□ 1.92
LINC00628-201ENST00000628516 ADGRL1O94910 1474 aa27.05■■□□□ 1.92
LINC00628-201ENST00000628516 ARAP3Q8WWN8 1544 aa27.01■■□□□ 1.91
LINC00628-201ENST00000628516 PHLDB1Q86UU1 1377 aa27■■□□□ 1.91
LINC00628-201ENST00000628516 ARHGAP35Q9NRY4 1499 aa26.99■■□□□ 1.91
LINC00628-201ENST00000628516 ATP1B4Q9UN42 357 aaPredicted RBP26.97■■□□□ 1.91
LINC00628-201ENST00000628516 NEO1Q92859 1461 aa26.96■■□□□ 1.91
LINC00628-201ENST00000628516 FMN1Q68DA7 1419 aa26.96■■□□□ 1.91
LINC00628-201ENST00000628516 CDK13Q14004 1512 aaKnown RBP26.94■■□□□ 1.9
LINC00628-201ENST00000628516 RAPGEF3O95398 923 aa26.92■■□□□ 1.9
LINC00628-201ENST00000628516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.89■■□□□ 1.89
LINC00628-201ENST00000628516 HECW1Q76N89 1606 aa26.88■■□□□ 1.89
LINC00628-201ENST00000628516 TTC37Q6PGP7 1564 aa26.84■■□□□ 1.89
LINC00628-201ENST00000628516 FANCAO15360 1455 aa26.82■■□□□ 1.88
LINC00628-201ENST00000628516 CDK11AQ9UQ88 783 aaPredicted RBP26.82■■□□□ 1.88
LINC00628-201ENST00000628516 AKNAQ7Z591 1439 aa26.82■■□□□ 1.88
LINC00628-201ENST00000628516 DENND4BO75064 1496 aaPredicted RBP26.79■■□□□ 1.88
LINC00628-201ENST00000628516 FRMPD1Q5SYB0 1578 aa26.79■■□□□ 1.88
LINC00628-201ENST00000628516 CFAP74Q9C0B2 1584 aa26.78■■□□□ 1.88
LINC00628-201ENST00000628516 PLCH2O75038 1416 aa26.73■■□□□ 1.87
LINC00628-201ENST00000628516 TROQ12816 1431 aaPredicted RBP26.71■■□□□ 1.87
LINC00628-201ENST00000628516 RICTORQ6R327 1708 aa26.7■■□□□ 1.87
LINC00628-201ENST00000628516 ARID4BQ4LE39 1312 aaPredicted RBP26.69■■□□□ 1.86
LINC00628-201ENST00000628516 CASKIN1Q8WXD9 1431 aa26.69■■□□□ 1.86
LINC00628-201ENST00000628516 LRRIQ1Q96JM4 1722 aa26.68■■□□□ 1.86
LINC00628-201ENST00000628516 CLIP1P30622 1438 aa26.68■■□□□ 1.86
LINC00628-201ENST00000628516 KIF14Q15058 1648 aa26.68■■□□□ 1.86
LINC00628-201ENST00000628516 PCF11O94913 1555 aaKnown RBP26.67■■□□□ 1.86
LINC00628-201ENST00000628516 EFCAB2Q5VUJ9 269 aa26.66■■□□□ 1.86
LINC00628-201ENST00000628516 SCAPERQ9BY12 1400 aa26.65■■□□□ 1.86
LINC00628-201ENST00000628516 MYO5CQ9NQX4 1742 aa26.65■■□□□ 1.86
LINC00628-201ENST00000628516 ARHGEF40Q8TER5 1519 aa26.65■■□□□ 1.86
LINC00628-201ENST00000628516 CCDC18Q5T9S5 1454 aa26.63■■□□□ 1.85
LINC00628-201ENST00000628516 ZMYM4Q5VZL5 1548 aa26.62■■□□□ 1.85
LINC00628-201ENST00000628516 ILDR1Q86SU0 546 aaPredicted RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms