RNA–Protein interactions for RNA: ENST00000627393.1

PCNP-208, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2 BASIC

Gene PCNP, Length 136 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-208ENST00000627393 TOP2BQ02880 1626 aa6.57□□□□□ -1.36
PCNP-208ENST00000627393 SHROOM2Q13796 1616 aa6.56□□□□□ -1.36
PCNP-208ENST00000627393 CCDC88BA6NC98 1476 aa6.55□□□□□ -1.36
PCNP-208ENST00000627393 FGD5Q6ZNL6 1462 aa6.55□□□□□ -1.36
PCNP-208ENST00000627393 GRIN2AQ12879 1464 aa6.53□□□□□ -1.36
PCNP-208ENST00000627393 ADCY10Q96PN6 1610 aa6.53□□□□□ -1.36
PCNP-208ENST00000627393 PRG4Q92954 1404 aaPredicted RBP6.52□□□□□ -1.37
PCNP-208ENST00000627393 CERKQ8TCT0 537 aa6.52□□□□□ -1.37
PCNP-208ENST00000627393 NUP160Q12769 1436 aa6.51□□□□□ -1.37
PCNP-208ENST00000627393 PPRC1Q5VV67 1664 aaKnown RBP6.51□□□□□ -1.37
PCNP-208ENST00000627393 ABCA5Q8WWZ7 1642 aa6.48□□□□□ -1.37
PCNP-208ENST00000627393 JPH4Q96JJ6 628 aa6.48□□□□□ -1.37
PCNP-208ENST00000627393 ADAMTS12P58397 1594 aa6.48□□□□□ -1.37
PCNP-208ENST00000627393 COL17A1Q9UMD9 1497 aaPredicted RBP6.47□□□□□ -1.37
PCNP-208ENST00000627393 CUX1P39880 1505 aa6.46□□□□□ -1.37
PCNP-208ENST00000627393 PCF11O94913 1555 aaKnown RBP6.45□□□□□ -1.38
PCNP-208ENST00000627393 KIF21BO75037 1637 aa6.45□□□□□ -1.38
PCNP-208ENST00000627393 GLI2P10070 1586 aa6.44□□□□□ -1.38
PCNP-208ENST00000627393 TEX14Q8IWB6 1497 aa6.44□□□□□ -1.38
PCNP-208ENST00000627393 ABCA10Q8WWZ4 1543 aa6.44□□□□□ -1.38
PCNP-208ENST00000627393 FHAD1B1AJZ9 1412 aa6.43□□□□□ -1.38
PCNP-208ENST00000627393 PTPRMP28827 1452 aa6.43□□□□□ -1.38
PCNP-208ENST00000627393 PLB1Q6P1J6 1458 aa6.42□□□□□ -1.38
PCNP-208ENST00000627393 ASXL2Q76L83 1435 aa6.42□□□□□ -1.38
PCNP-208ENST00000627393 MAP3K4Q9Y6R4 1608 aa6.41□□□□□ -1.38
PCNP-208ENST00000627393 CUL7Q14999 1698 aa6.4□□□□□ -1.38
PCNP-208ENST00000627393 HSPA2P54652 639 aa6.4□□□□□ -1.38
PCNP-208ENST00000627393 TTBK1Q5TCY1 1321 aaPredicted RBP6.4□□□□□ -1.39
PCNP-208ENST00000627393 RUSC2Q8N2Y8 1516 aa6.4□□□□□ -1.39
PCNP-208ENST00000627393 ADAMTSL3P82987 1691 aa6.39□□□□□ -1.39
PCNP-208ENST00000627393 ABCC2Q92887 1545 aa6.38□□□□□ -1.39
PCNP-208ENST00000627393 EPRSP07814 1512 aaKnown RBP6.36□□□□□ -1.39
PCNP-208ENST00000627393 KIAA0586Q9BVV6 1533 aa6.36□□□□□ -1.39
PCNP-208ENST00000627393 PTPRGP23470 1445 aa6.36□□□□□ -1.39
PCNP-208ENST00000627393 ERICH3Q5RHP9 1530 aa6.35□□□□□ -1.39
PCNP-208ENST00000627393 PLPPR3Q6T4P5 718 aa6.35□□□□□ -1.39
PCNP-208ENST00000627393 MADDQ8WXG6 1647 aa6.35□□□□□ -1.39
PCNP-208ENST00000627393 BCORL1Q5H9F3 1711 aa6.34□□□□□ -1.39
PCNP-208ENST00000627393 RIMS1Q86UR5 1692 aaKnown RBP6.34□□□□□ -1.39
PCNP-208ENST00000627393 ARID4BQ4LE39 1312 aaPredicted RBP6.33□□□□□ -1.4
PCNP-208ENST00000627393 WRNQ14191 1432 aaPredicted RBP eCLIP6.33□□□□□ -1.4
PCNP-208ENST00000627393 DMRT2Q9Y5R5 561 aa6.31□□□□□ -1.4
PCNP-208ENST00000627393 ZCCHC11Q5TAX3 1644 aaKnown RBP6.3□□□□□ -1.4
PCNP-208ENST00000627393 CD109Q6YHK3 1445 aa6.3□□□□□ -1.4
PCNP-208ENST00000627393 TNIKQ9UKE5 1360 aa6.3□□□□□ -1.4
PCNP-208ENST00000627393 CFAP43Q8NDM7 1665 aa6.3□□□□□ -1.4
PCNP-208ENST00000627393 UHRF1BP1LA0JNW5 1464 aa6.29□□□□□ -1.4
PCNP-208ENST00000627393 CARMIL2Q6F5E8 1435 aa6.29□□□□□ -1.4
PCNP-208ENST00000627393 MAGI3Q5TCQ9 1506 aa6.29□□□□□ -1.4
PCNP-208ENST00000627393 MED1Q15648 1581 aaPredicted RBP6.28□□□□□ -1.4
PCNP-208ENST00000627393 UACAQ9BZF9 1416 aa6.28□□□□□ -1.4
PCNP-208ENST00000627393 PHF23Q9BUL5 403 aaPredicted RBP6.28□□□□□ -1.4
PCNP-208ENST00000627393 YEATS2Q9ULM3 1422 aa6.27□□□□□ -1.41
PCNP-208ENST00000627393 STRCQ7RTU9 1775 aa6.27□□□□□ -1.41
PCNP-208ENST00000627393 KDM5BQ9UGL1 1544 aa6.27□□□□□ -1.41
PCNP-208ENST00000627393 KCNH8Q96L42 1107 aa6.27□□□□□ -1.41
PCNP-208ENST00000627393 WDR7Q9Y4E6 1490 aa6.27□□□□□ -1.41
PCNP-208ENST00000627393 ARAP3Q8WWN8 1544 aa6.26□□□□□ -1.41
PCNP-208ENST00000627393 IQSEC2Q5JU85 1478 aa6.26□□□□□ -1.41
PCNP-208ENST00000627393 UBAP1LF5GYI3 381 aa6.25□□□□□ -1.41
PCNP-208ENST00000627393 PREX1Q8TCU6 1659 aa6.25□□□□□ -1.41
PCNP-208ENST00000627393 BIVM-ERCC5R4GMW8 1640 aa6.24□□□□□ -1.41
PCNP-208ENST00000627393 RAPGEF3O95398 923 aa6.23□□□□□ -1.41
PCNP-208ENST00000627393 LTBP4Q8N2S1 1624 aa6.23□□□□□ -1.41
PCNP-208ENST00000627393 FER1L4A9Z1Z3 1794 aa6.23□□□□□ -1.41
PCNP-208ENST00000627393 POGZQ7Z3K3 1410 aa6.22□□□□□ -1.41
PCNP-208ENST00000627393 SCAF1Q9H7N4 1312 aaKnown RBP6.22□□□□□ -1.41
PCNP-208ENST00000627393 PTPRTO14522 1441 aa6.21□□□□□ -1.42
PCNP-208ENST00000627393 HSPA1LP34931 641 aa6.2□□□□□ -1.42
PCNP-208ENST00000627393 FANCAO15360 1455 aa6.2□□□□□ -1.42
PCNP-208ENST00000627393 ARHGEF40Q8TER5 1519 aa6.2□□□□□ -1.42
PCNP-208ENST00000627393 PHLDB1Q86UU1 1377 aa6.19□□□□□ -1.42
PCNP-208ENST00000627393 TTC37Q6PGP7 1564 aa6.19□□□□□ -1.42
PCNP-208ENST00000627393 MLECQ14165 292 aa6.19□□□□□ -1.42
PCNP-208ENST00000627393 IQGAP2Q13576 1575 aa6.18□□□□□ -1.42
PCNP-208ENST00000627393 UHRF1BP1Q6BDS2 1440 aa6.18□□□□□ -1.42
PCNP-208ENST00000627393 FRMPD1Q5SYB0 1578 aa6.18□□□□□ -1.42
PCNP-208ENST00000627393 PIP4K2BP78356 416 aa6.17□□□□□ -1.42
PCNP-208ENST00000627393 DISP1Q96F81 1524 aa6.16□□□□□ -1.42
PCNP-208ENST00000627393 CEBPAP49715 358 aaPredicted RBP6.16□□□□□ -1.42
PCNP-208ENST00000627393 SETD1BQ9UPS6 1966 aaKnown RBP6.16□□□□□ -1.42
PCNP-208ENST00000627393 AKNAQ7Z591 1439 aa6.16□□□□□ -1.42
PCNP-208ENST00000627393 NEO1Q92859 1461 aa6.15□□□□□ -1.43
PCNP-208ENST00000627393 SIGLEC1Q9BZZ2 1709 aa6.14□□□□□ -1.43
PCNP-208ENST00000627393 ZNF335Q9H4Z2 1342 aaPredicted RBP6.14□□□□□ -1.43
PCNP-208ENST00000627393 IGF1RP08069 1367 aa6.14□□□□□ -1.43
PCNP-208ENST00000627393 ABCA9Q8IUA7 1624 aa6.14□□□□□ -1.43
PCNP-208ENST00000627393 KIAA0556O60303 1618 aa6.13□□□□□ -1.43
PCNP-208ENST00000627393 RICTORQ6R327 1708 aa6.13□□□□□ -1.43
PCNP-208ENST00000627393 EFCAB5A4FU69 1503 aa6.12□□□□□ -1.43
PCNP-208ENST00000627393 TOM1O60784 492 aa6.12□□□□□ -1.43
PCNP-208ENST00000627393 DENND4BO75064 1496 aaPredicted RBP6.12□□□□□ -1.43
PCNP-208ENST00000627393 ZFYVE16Q7Z3T8 1539 aa6.12□□□□□ -1.43
PCNP-208ENST00000627393 NCOA1Q15788 1441 aa6.11□□□□□ -1.43
PCNP-208ENST00000627393 ARID3CA6NKF2 412 aa6.11□□□□□ -1.43
PCNP-208ENST00000627393 SENP3Q9H4L4 574 aaPredicted RBP6.11□□□□□ -1.43
PCNP-208ENST00000627393 UGGT2Q9NYU1 1516 aa6.1□□□□□ -1.43
PCNP-208ENST00000627393 ARHGEF12Q9NZN5 1544 aa6.1□□□□□ -1.43
PCNP-208ENST00000627393 CARMIL1Q5VZK9 1371 aa6.1□□□□□ -1.43
PCNP-208ENST00000627393 ABCA8O94911 1581 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms