RNA–Protein interactions for RNA: ENST00000627393.1

PCNP-208, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2 BASIC

Gene PCNP, Length 136 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-208ENST00000627393 NISCHQ9Y2I1 1504 aa8.88□□□□□ -0.99
PCNP-208ENST00000627393 ABCC9O60706 1549 aa8.71□□□□□ -1.01
PCNP-208ENST00000627393 DNAJC5BQ9UF47 199 aa8.59□□□□□ -1.03
PCNP-208ENST00000627393 DNAJC5Q9H3Z4 198 aa8.27□□□□□ -1.09
PCNP-208ENST00000627393 CCDC180Q9P1Z9 1646 aa8.21□□□□□ -1.09
PCNP-208ENST00000627393 RB1CC1Q8TDY2 1594 aa8.07□□□□□ -1.12
PCNP-208ENST00000627393 PABPN1Q86U42 306 aaKnown RBP eCLIP8.03□□□□□ -1.12
PCNP-208ENST00000627393 UNC13AQ9UPW8 1703 aa7.91□□□□□ -1.14
PCNP-208ENST00000627393 CECR2Q9BXF3 1484 aa7.89□□□□□ -1.15
PCNP-208ENST00000627393 NACADO15069 1562 aa7.87□□□□□ -1.15
PCNP-208ENST00000627393 CC2D2AQ9P2K1 1620 aa7.85□□□□□ -1.15
PCNP-208ENST00000627393 BICRAQ9NZM4 1560 aa7.82□□□□□ -1.16
PCNP-208ENST00000627393 DCAF8L2P0C7V8 631 aa7.8□□□□□ -1.16
PCNP-208ENST00000627393 TRIM41Q8WV44 630 aa7.76□□□□□ -1.17
PCNP-208ENST00000627393 CUX2O14529 1486 aa7.7□□□□□ -1.18
PCNP-208ENST00000627393 EIF4G1Q04637 1599 aaKnown RBP7.68□□□□□ -1.18
PCNP-208ENST00000627393 SHROOM4Q9ULL8 1493 aa7.65□□□□□ -1.18
PCNP-208ENST00000627393 ERCC6Q03468 1493 aa7.58□□□□□ -1.2
PCNP-208ENST00000627393 MYO15BQ96JP2 1530 aa7.56□□□□□ -1.2
PCNP-208ENST00000627393 AEBP2Q6ZN18 517 aaPredicted RBP7.47□□□□□ -1.21
PCNP-208ENST00000627393 SCRIBQ14160 1630 aa7.47□□□□□ -1.21
PCNP-208ENST00000627393 THOC2Q8NI27 1593 aaKnown RBP7.35□□□□□ -1.23
PCNP-208ENST00000627393 NESP48681 1621 aa7.33□□□□□ -1.24
PCNP-208ENST00000627393 SMARCA2P51531 1590 aa7.29□□□□□ -1.24
PCNP-208ENST00000627393 BAZ1AQ9NRL2 1556 aaPredicted RBP7.29□□□□□ -1.24
PCNP-208ENST00000627393 TRHP20396 242 aaPredicted RBP7.28□□□□□ -1.24
PCNP-208ENST00000627393 OSCARQ8IYS5 282 aa7.28□□□□□ -1.24
PCNP-208ENST00000627393 DCAF1Q9Y4B6 1507 aa7.27□□□□□ -1.25
PCNP-208ENST00000627393 RIMBP3CA6NJZ7 1639 aa7.25□□□□□ -1.25
PCNP-208ENST00000627393 RIMBP3BA6NNM3 1639 aa7.25□□□□□ -1.25
PCNP-208ENST00000627393 RIMBP3Q9UFD9 1639 aa7.25□□□□□ -1.25
PCNP-208ENST00000627393 KIF21AQ7Z4S6 1674 aa7.25□□□□□ -1.25
PCNP-208ENST00000627393 NCAPD3P42695 1498 aa7.24□□□□□ -1.25
PCNP-208ENST00000627393 ZCCHC6Q5VYS8 1495 aaKnown RBP7.24□□□□□ -1.25
PCNP-208ENST00000627393 LAMC3Q9Y6N6 1575 aa7.2□□□□□ -1.26
PCNP-208ENST00000627393 ILDR1Q86SU0 546 aaPredicted RBP7.19□□□□□ -1.26
PCNP-208ENST00000627393 PDS5BQ9NTI5 1447 aa7.18□□□□□ -1.26
PCNP-208ENST00000627393 ATAD2BQ9ULI0 1458 aa7.17□□□□□ -1.26
PCNP-208ENST00000627393 HMGXB3Q12766 1538 aa7.17□□□□□ -1.26
PCNP-208ENST00000627393 CYB5RLQ6IPT4 315 aa7.16□□□□□ -1.26
PCNP-208ENST00000627393 ARHGEF11O15085 1522 aa7.16□□□□□ -1.26
PCNP-208ENST00000627393 MRC2Q9UBG0 1479 aa7.14□□□□□ -1.27
PCNP-208ENST00000627393 WDR62O43379 1518 aa7.12□□□□□ -1.27
PCNP-208ENST00000627393 BAZ1BQ9UIG0 1483 aaKnown RBP7.1□□□□□ -1.27
PCNP-208ENST00000627393 SMARCA4P51532 1647 aa7.05□□□□□ -1.28
PCNP-208ENST00000627393 ARAP1Q96P48 1450 aa7.04□□□□□ -1.28
PCNP-208ENST00000627393 CADPSQ9ULU8 1353 aa7.02□□□□□ -1.29
PCNP-208ENST00000627393 CEP164Q9UPV0 1460 aa7.02□□□□□ -1.29
PCNP-208ENST00000627393 FANCD2Q9BXW9 1451 aa6.96□□□□□ -1.3
PCNP-208ENST00000627393 CHD1O14646 1710 aa6.95□□□□□ -1.3
PCNP-208ENST00000627393 PEG3Q9GZU2 1588 aa6.95□□□□□ -1.3
PCNP-208ENST00000627393 RSF1Q96T23 1441 aaPredicted RBP6.93□□□□□ -1.3
PCNP-208ENST00000627393 URB2Q14146 1524 aaKnown RBP6.92□□□□□ -1.3
PCNP-208ENST00000627393 ZNF608Q9ULD9 1512 aaPredicted RBP6.92□□□□□ -1.3
PCNP-208ENST00000627393 FBLN2P98095 1184 aa6.92□□□□□ -1.3
PCNP-208ENST00000627393 IFT140Q96RY7 1462 aa6.88□□□□□ -1.31
PCNP-208ENST00000627393 EIF4G3O43432 1585 aaKnown RBP6.87□□□□□ -1.31
PCNP-208ENST00000627393 KDM4FA0A1W2PPD8 638 aa6.85□□□□□ -1.31
PCNP-208ENST00000627393 MROH2BQ7Z745 1585 aa6.84□□□□□ -1.31
PCNP-208ENST00000627393 ERCC6L2Q5T890 1561 aa6.83□□□□□ -1.32
PCNP-208ENST00000627393 FBXO41Q8TF61 875 aa6.83□□□□□ -1.32
PCNP-208ENST00000627393 LMTK3Q96Q04 1460 aa6.83□□□□□ -1.32
PCNP-208ENST00000627393 CFTRP13569 1480 aa6.82□□□□□ -1.32
PCNP-208ENST00000627393 CLASP1Q7Z460 1538 aa6.81□□□□□ -1.32
PCNP-208ENST00000627393 AQRO60306 1485 aaKnown RBP eCLIP6.8□□□□□ -1.32
PCNP-208ENST00000627393 KIF13AQ9H1H9 1805 aa6.8□□□□□ -1.32
PCNP-208ENST00000627393 GAPVD1Q14C86 1478 aa6.79□□□□□ -1.32
PCNP-208ENST00000627393 SYNJ1O43426 1573 aa6.78□□□□□ -1.32
PCNP-208ENST00000627393 HECW2Q9P2P5 1572 aa6.78□□□□□ -1.32
PCNP-208ENST00000627393 PRDM2Q13029 1718 aa6.78□□□□□ -1.32
PCNP-208ENST00000627393 SOCS7O14512 581 aa6.77□□□□□ -1.33
PCNP-208ENST00000627393 TOPBP1Q92547 1522 aa6.76□□□□□ -1.33
PCNP-208ENST00000627393 WIZO95785 1651 aa6.76□□□□□ -1.33
PCNP-208ENST00000627393 CHMP7Q8WUX9 453 aaPredicted RBP6.75□□□□□ -1.33
PCNP-208ENST00000627393 KDM6BO15054 1643 aa6.75□□□□□ -1.33
PCNP-208ENST00000627393 TARBP1Q13395 1621 aaKnown RBP6.74□□□□□ -1.33
PCNP-208ENST00000627393 ABCC8Q09428 1581 aa6.73□□□□□ -1.33
PCNP-208ENST00000627393 SNAPC4Q5SXM2 1469 aa6.73□□□□□ -1.33
PCNP-208ENST00000627393 FAM69CQ0P6D2 419 aa6.71□□□□□ -1.34
PCNP-208ENST00000627393 ILDR2Q71H61 639 aa6.71□□□□□ -1.34
PCNP-208ENST00000627393 ADGRL1O94910 1474 aa6.71□□□□□ -1.34
PCNP-208ENST00000627393 DNMBPQ6XZF7 1577 aa6.7□□□□□ -1.34
PCNP-208ENST00000627393 SYNJ2O15056 1496 aa6.7□□□□□ -1.34
PCNP-208ENST00000627393 TDRD9Q8NDG6 1382 aaKnown RBP6.69□□□□□ -1.34
PCNP-208ENST00000627393 DISP3Q9P2K9 1392 aa6.69□□□□□ -1.34
PCNP-208ENST00000627393 TSPOAP1O95153 1857 aa6.68□□□□□ -1.34
PCNP-208ENST00000627393 MAGI1Q96QZ7 1491 aaPredicted RBP6.67□□□□□ -1.34
PCNP-208ENST00000627393 POLA1P09884 1462 aaPredicted RBP6.66□□□□□ -1.34
PCNP-208ENST00000627393 ABCC10Q5T3U5 1492 aa6.66□□□□□ -1.34
PCNP-208ENST00000627393 RAD54L2Q9Y4B4 1467 aa6.65□□□□□ -1.35
PCNP-208ENST00000627393 NPM1P06748 294 aaKnown RBP eCLIP6.64□□□□□ -1.35
PCNP-208ENST00000627393 SOGA1O94964 1423 aa6.64□□□□□ -1.35
PCNP-208ENST00000627393 WDR97A6NE52 1622 aa6.64□□□□□ -1.35
PCNP-208ENST00000627393 GRIN2BQ13224 1484 aa6.63□□□□□ -1.35
PCNP-208ENST00000627393 DIP2BQ9P265 1576 aa6.63□□□□□ -1.35
PCNP-208ENST00000627393 CEP170Q5SW79 1584 aa6.61□□□□□ -1.35
PCNP-208ENST00000627393 TOP2AP11388 1531 aaKnown RBP6.61□□□□□ -1.35
PCNP-208ENST00000627393 PBRM1Q86U86 1689 aa6.61□□□□□ -1.35
PCNP-208ENST00000627393 MAPKBP1O60336 1514 aa6.59□□□□□ -1.35
PCNP-208ENST00000627393 SPATA31D1Q6ZQQ2 1576 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms