RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
CHD2-209ENST00000627185 TNIKQ9UKE5 1360 aa13.36□□□□□ -0.27
CHD2-209ENST00000627185 NCAPD3P42695 1498 aa13.36□□□□□ -0.27
CHD2-209ENST00000627185 HMGXB3Q12766 1538 aa13.35□□□□□ -0.27
CHD2-209ENST00000627185 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
CHD2-209ENST00000627185 IFNLR1Q8IU57 520 aaPredicted RBP13.33□□□□□ -0.28
CHD2-209ENST00000627185 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
CHD2-209ENST00000627185 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
CHD2-209ENST00000627185 FAM9AQ8IZU1 332 aaPredicted RBP13.26□□□□□ -0.29
CHD2-209ENST00000627185 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
CHD2-209ENST00000627185 SOGA1O94964 1423 aa13.24□□□□□ -0.29
CHD2-209ENST00000627185 KIF21BO75037 1637 aa13.24□□□□□ -0.29
CHD2-209ENST00000627185 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
CHD2-209ENST00000627185 CEP162Q5TB80 1403 aa13.21□□□□□ -0.3
CHD2-209ENST00000627185 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
CHD2-209ENST00000627185 TOP2BQ02880 1626 aa13.2□□□□□ -0.3
CHD2-209ENST00000627185 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
CHD2-209ENST00000627185 SYNJ1O43426 1573 aa13.19□□□□□ -0.3
CHD2-209ENST00000627185 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
CHD2-209ENST00000627185 MIER1Q8N108 512 aa13.17□□□□□ -0.3
CHD2-209ENST00000627185 BIVM-ERCC5R4GMW8 1640 aa13.17□□□□□ -0.3
CHD2-209ENST00000627185 CFTRP13569 1480 aa13.15□□□□□ -0.3
CHD2-209ENST00000627185 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
CHD2-209ENST00000627185 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
CHD2-209ENST00000627185 ERICH3Q5RHP9 1530 aa13.11□□□□□ -0.31
CHD2-209ENST00000627185 RUSC2Q8N2Y8 1516 aa13.11□□□□□ -0.31
CHD2-209ENST00000627185 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
CHD2-209ENST00000627185 PRXQ9BXM0 1461 aa13.08□□□□□ -0.32
CHD2-209ENST00000627185 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
CHD2-209ENST00000627185 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
CHD2-209ENST00000627185 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
CHD2-209ENST00000627185 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
CHD2-209ENST00000627185 PKD2Q13563 968 aa13.02□□□□□ -0.33
CHD2-209ENST00000627185 VPS8Q8N3P4 1428 aa13.02□□□□□ -0.33
CHD2-209ENST00000627185 CLIP1P30622 1438 aa13.01□□□□□ -0.33
CHD2-209ENST00000627185 PPARGC1BQ86YN6 1023 aaKnown RBP13□□□□□ -0.33
CHD2-209ENST00000627185 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
CHD2-209ENST00000627185 CUX1P39880 1505 aa12.99□□□□□ -0.33
CHD2-209ENST00000627185 UBTFP17480 764 aaKnown RBP12.99□□□□□ -0.33
CHD2-209ENST00000627185 KIF27Q86VH2 1401 aa12.98□□□□□ -0.33
CHD2-209ENST00000627185 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
CHD2-209ENST00000627185 RAPGEF2Q9Y4G8 1499 aa12.97□□□□□ -0.33
CHD2-209ENST00000627185 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
CHD2-209ENST00000627185 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
CHD2-209ENST00000627185 MAP3K1Q13233 1512 aa12.86□□□□□ -0.35
CHD2-209ENST00000627185 ECM2O94769 699 aaPredicted RBP12.85□□□□□ -0.35
CHD2-209ENST00000627185 NUBP1P53384 320 aa12.85□□□□□ -0.35
CHD2-209ENST00000627185 CLSPNQ9HAW4 1339 aa12.84□□□□□ -0.35
CHD2-209ENST00000627185 IGF1RP08069 1367 aa12.83□□□□□ -0.36
CHD2-209ENST00000627185 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
CHD2-209ENST00000627185 ARAP1Q96P48 1450 aa12.82□□□□□ -0.36
CHD2-209ENST00000627185 CC2D2AQ9P2K1 1620 aa12.81□□□□□ -0.36
CHD2-209ENST00000627185 CCER1Q8TC90 406 aaPredicted RBP12.8□□□□□ -0.36
CHD2-209ENST00000627185 GSE1Q14687 1217 aa12.78□□□□□ -0.36
CHD2-209ENST00000627185 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
CHD2-209ENST00000627185 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.36
CHD2-209ENST00000627185 RRBP1Q9P2E9 1410 aaKnown RBP12.77□□□□□ -0.37
CHD2-209ENST00000627185 CUX2O14529 1486 aa12.77□□□□□ -0.37
CHD2-209ENST00000627185 FANCD2Q9BXW9 1451 aa12.77□□□□□ -0.37
CHD2-209ENST00000627185 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
CHD2-209ENST00000627185 LAMC3Q9Y6N6 1575 aa12.76□□□□□ -0.37
CHD2-209ENST00000627185 FGD5Q6ZNL6 1462 aa12.75□□□□□ -0.37
CHD2-209ENST00000627185 ARHGAP35Q9NRY4 1499 aa12.75□□□□□ -0.37
CHD2-209ENST00000627185 CARMIL1Q5VZK9 1371 aa12.74□□□□□ -0.37
CHD2-209ENST00000627185 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
CHD2-209ENST00000627185 FXR2P51116 673 aaKnown RBP eCLIP12.73□□□□□ -0.37
CHD2-209ENST00000627185 CHADLQ6NUI6 762 aa12.73□□□□□ -0.37
CHD2-209ENST00000627185 RGL2O15211 777 aa12.72□□□□□ -0.37
CHD2-209ENST00000627185 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
CHD2-209ENST00000627185 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
CHD2-209ENST00000627185 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
CHD2-209ENST00000627185 RASEFQ8IZ41 740 aa12.7□□□□□ -0.38
CHD2-209ENST00000627185 TOPBP1Q92547 1522 aa12.69□□□□□ -0.38
CHD2-209ENST00000627185 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.384e-9■■■■■ 37
CHD2-209ENST00000627185 FHAD1B1AJZ9 1412 aa12.69□□□□□ -0.38
CHD2-209ENST00000627185 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
CHD2-209ENST00000627185 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
CHD2-209ENST00000627185 CUL7Q14999 1698 aa12.67□□□□□ -0.38
CHD2-209ENST00000627185 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
CHD2-209ENST00000627185 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
CHD2-209ENST00000627185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.65□□□□□ -0.38
CHD2-209ENST00000627185 PDS5BQ9NTI5 1447 aa12.63□□□□□ -0.39
CHD2-209ENST00000627185 PIP4P2Q8N4L2 257 aa12.62□□□□□ -0.39
CHD2-209ENST00000627185 TIAM1Q13009 1591 aa12.61□□□□□ -0.39
CHD2-209ENST00000627185 CHRM1P11229 460 aaPredicted RBP12.61□□□□□ -0.39
CHD2-209ENST00000627185 CCNB3Q8WWL7 1395 aa12.6□□□□□ -0.39
CHD2-209ENST00000627185 WDR97A6NE52 1622 aa12.6□□□□□ -0.39
CHD2-209ENST00000627185 RNF25Q96BH1 459 aaPredicted RBP12.6□□□□□ -0.39
CHD2-209ENST00000627185 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
CHD2-209ENST00000627185 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
CHD2-209ENST00000627185 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.4
CHD2-209ENST00000627185 LRRC9Q6ZRR7 1453 aa12.58□□□□□ -0.4
CHD2-209ENST00000627185 CASKIN1Q8WXD9 1431 aa12.57□□□□□ -0.4
CHD2-209ENST00000627185 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
CHD2-209ENST00000627185 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
CHD2-209ENST00000627185 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
CHD2-209ENST00000627185 ABCA5Q8WWZ7 1642 aa12.56□□□□□ -0.4
CHD2-209ENST00000627185 BBXQ8WY36 941 aaPredicted RBP12.55□□□□□ -0.4
CHD2-209ENST00000627185 CFAP43Q8NDM7 1665 aa12.54□□□□□ -0.4
CHD2-209ENST00000627185 FMN1Q68DA7 1419 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms