RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 SHROOM2Q13796 1616 aa28.1■■■□□ 2.09
UBE3D-208ENST00000626828 CHIC1Q5VXU3 224 aa28.1■■■□□ 2.09
UBE3D-208ENST00000626828 RAPGEF2Q9Y4G8 1499 aa28.08■■■□□ 2.09
UBE3D-208ENST00000626828 PRG4Q92954 1404 aaPredicted RBP28.08■■■□□ 2.09
UBE3D-208ENST00000626828 CSRNP3Q8WYN3 585 aa28.04■■■□□ 2.08
UBE3D-208ENST00000626828 ERCC6L2Q5T890 1561 aa28.03■■■□□ 2.08
UBE3D-208ENST00000626828 EEA1Q15075 1411 aa27.96■■■□□ 2.07
UBE3D-208ENST00000626828 PRXQ9BXM0 1461 aa27.95■■■□□ 2.06
UBE3D-208ENST00000626828 FAM9AQ8IZU1 332 aaPredicted RBP27.89■■■□□ 2.06
UBE3D-208ENST00000626828 IQGAP2Q13576 1575 aa27.87■■■□□ 2.05
UBE3D-208ENST00000626828 CARMIL2Q6F5E8 1435 aa27.85■■■□□ 2.05
UBE3D-208ENST00000626828 TRHP20396 242 aaPredicted RBP27.81■■■□□ 2.04
UBE3D-208ENST00000626828 PTPRGP23470 1445 aa27.77■■■□□ 2.04
UBE3D-208ENST00000626828 TNIKQ9UKE5 1360 aa27.76■■■□□ 2.03
UBE3D-208ENST00000626828 UGGT2Q9NYU1 1516 aa27.75■■■□□ 2.03
UBE3D-208ENST00000626828 NPM1P06748 294 aaKnown RBP eCLIP27.74■■■□□ 2.03
UBE3D-208ENST00000626828 TTBK1Q5TCY1 1321 aaPredicted RBP27.72■■■□□ 2.03
UBE3D-208ENST00000626828 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
UBE3D-208ENST00000626828 DISP1Q96F81 1524 aa27.71■■■□□ 2.03
UBE3D-208ENST00000626828 GOLGA3Q08378 1498 aa27.64■■■□□ 2.01
UBE3D-208ENST00000626828 KIAA0556O60303 1618 aa27.59■■■□□ 2.01
UBE3D-208ENST00000626828 KIF21BO75037 1637 aa27.58■■■□□ 2.01
UBE3D-208ENST00000626828 ADCY10Q96PN6 1610 aa27.56■■■□□ 2
UBE3D-208ENST00000626828 UACAQ9BZF9 1416 aa27.55■■■□□ 2
UBE3D-208ENST00000626828 UBTFP17480 764 aaKnown RBP27.54■■■□□ 2
UBE3D-208ENST00000626828 P3H3Q8IVL6 736 aa27.51■■□□□ 1.99
UBE3D-208ENST00000626828 UHRF1BP1LA0JNW5 1464 aa27.51■■□□□ 1.99
UBE3D-208ENST00000626828 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
UBE3D-208ENST00000626828 RANGAP1P46060 587 aaPredicted RBP27.48■■□□□ 1.99
UBE3D-208ENST00000626828 ABCC2Q92887 1545 aa27.46■■□□□ 1.99
UBE3D-208ENST00000626828 MAPKBP1O60336 1514 aa27.43■■□□□ 1.98
UBE3D-208ENST00000626828 FAM69CQ0P6D2 419 aa27.41■■□□□ 1.98
UBE3D-208ENST00000626828 PLB1Q6P1J6 1458 aa27.38■■□□□ 1.97
UBE3D-208ENST00000626828 SAMD9Q5K651 1589 aa27.37■■□□□ 1.97
UBE3D-208ENST00000626828 ABCC10Q5T3U5 1492 aa27.37■■□□□ 1.97
UBE3D-208ENST00000626828 KDM5BQ9UGL1 1544 aa27.36■■□□□ 1.97
UBE3D-208ENST00000626828 ABCA8O94911 1581 aa27.32■■□□□ 1.96
UBE3D-208ENST00000626828 KIF13AQ9H1H9 1805 aa27.31■■□□□ 1.96
UBE3D-208ENST00000626828 ASXL2Q76L83 1435 aa27.31■■□□□ 1.96
UBE3D-208ENST00000626828 EFCAB5A4FU69 1503 aa27.27■■□□□ 1.96
UBE3D-208ENST00000626828 FHOD3Q2V2M9 1422 aa27.26■■□□□ 1.95
UBE3D-208ENST00000626828 ZCCHC11Q5TAX3 1644 aaKnown RBP27.24■■□□□ 1.95
UBE3D-208ENST00000626828 DIP2BQ9P265 1576 aa27.23■■□□□ 1.95
UBE3D-208ENST00000626828 ARID3CA6NKF2 412 aa27.18■■□□□ 1.94
UBE3D-208ENST00000626828 ATP10BO94823 1461 aa27.17■■□□□ 1.94
UBE3D-208ENST00000626828 RAPGEF6Q8TEU7 1601 aa27.16■■□□□ 1.94
UBE3D-208ENST00000626828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.15■■□□□ 1.94
UBE3D-208ENST00000626828 HNRNPUL2Q1KMD3 747 aaKnown RBP27.15■■□□□ 1.94
UBE3D-208ENST00000626828 KCNH8Q96L42 1107 aa27.15■■□□□ 1.94
UBE3D-208ENST00000626828 ARHGAP35Q9NRY4 1499 aa27.14■■□□□ 1.94
UBE3D-208ENST00000626828 GLI2P10070 1586 aa27.14■■□□□ 1.93
UBE3D-208ENST00000626828 EPRSP07814 1512 aaKnown RBP27.13■■□□□ 1.93
UBE3D-208ENST00000626828 WDR7Q9Y4E6 1490 aa27.13■■□□□ 1.93
UBE3D-208ENST00000626828 FMN1Q68DA7 1419 aa27.09■■□□□ 1.93
UBE3D-208ENST00000626828 TSPOAP1O95153 1857 aa27.08■■□□□ 1.93
UBE3D-208ENST00000626828 NUP153P49790 1475 aaKnown RBP27.06■■□□□ 1.92
UBE3D-208ENST00000626828 PLEKHD1A6NEE1 506 aa27.05■■□□□ 1.92
UBE3D-208ENST00000626828 ATP1B4Q9UN42 357 aaPredicted RBP27.05■■□□□ 1.92
UBE3D-208ENST00000626828 CLIP1P30622 1438 aa26.99■■□□□ 1.91
UBE3D-208ENST00000626828 LOC105371045A0A1W2PR82 267 aa26.97■■□□□ 1.91
UBE3D-208ENST00000626828 MAP3K4Q9Y6R4 1608 aa26.96■■□□□ 1.91
UBE3D-208ENST00000626828 CD109Q6YHK3 1445 aa26.96■■□□□ 1.91
UBE3D-208ENST00000626828 CDK11AQ9UQ88 783 aaPredicted RBP26.93■■□□□ 1.9
UBE3D-208ENST00000626828 TEX14Q8IWB6 1497 aa26.92■■□□□ 1.9
UBE3D-208ENST00000626828 PPRC1Q5VV67 1664 aaKnown RBP26.9■■□□□ 1.9
UBE3D-208ENST00000626828 CFAP43Q8NDM7 1665 aa26.89■■□□□ 1.9
UBE3D-208ENST00000626828 HECW1Q76N89 1606 aa26.88■■□□□ 1.89
UBE3D-208ENST00000626828 MAGI3Q5TCQ9 1506 aa26.87■■□□□ 1.89
UBE3D-208ENST00000626828 KDM6BO15054 1643 aa26.86■■□□□ 1.89
UBE3D-208ENST00000626828 CASKIN1Q8WXD9 1431 aa26.85■■□□□ 1.89
UBE3D-208ENST00000626828 CDK13Q14004 1512 aaKnown RBP26.85■■□□□ 1.89
UBE3D-208ENST00000626828 CEP162Q5TB80 1403 aa26.82■■□□□ 1.88
UBE3D-208ENST00000626828 ABCA9Q8IUA7 1624 aa26.81■■□□□ 1.88
UBE3D-208ENST00000626828 PHLDB1Q86UU1 1377 aa26.76■■□□□ 1.87
UBE3D-208ENST00000626828 COL17A1Q9UMD9 1497 aaPredicted RBP26.74■■□□□ 1.87
UBE3D-208ENST00000626828 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
UBE3D-208ENST00000626828 CCDC18Q5T9S5 1454 aa26.73■■□□□ 1.87
UBE3D-208ENST00000626828 PCF11O94913 1555 aaKnown RBP26.72■■□□□ 1.87
UBE3D-208ENST00000626828 TROQ12816 1431 aaPredicted RBP26.7■■□□□ 1.86
UBE3D-208ENST00000626828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.7■■□□□ 1.86
UBE3D-208ENST00000626828 LRRIQ1Q96JM4 1722 aa26.69■■□□□ 1.86
UBE3D-208ENST00000626828 NEO1Q92859 1461 aa26.67■■□□□ 1.86
UBE3D-208ENST00000626828 ARAP3Q8WWN8 1544 aa26.65■■□□□ 1.86
UBE3D-208ENST00000626828 PLCH2O75038 1416 aa26.62■■□□□ 1.85
UBE3D-208ENST00000626828 EFCAB2Q5VUJ9 269 aa26.6■■□□□ 1.85
UBE3D-208ENST00000626828 TTC37Q6PGP7 1564 aa26.59■■□□□ 1.85
UBE3D-208ENST00000626828 AKNAQ7Z591 1439 aa26.58■■□□□ 1.85
UBE3D-208ENST00000626828 FANCAO15360 1455 aa26.58■■□□□ 1.85
UBE3D-208ENST00000626828 RAPGEF3O95398 923 aa26.57■■□□□ 1.84
UBE3D-208ENST00000626828 KIF14Q15058 1648 aa26.57■■□□□ 1.84
UBE3D-208ENST00000626828 VPS8Q8N3P4 1428 aa26.52■■□□□ 1.84
UBE3D-208ENST00000626828 CFAP74Q9C0B2 1584 aa26.51■■□□□ 1.83
UBE3D-208ENST00000626828 MTUS2Q5JR59 1369 aa26.51■■□□□ 1.83
UBE3D-208ENST00000626828 MYO5CQ9NQX4 1742 aa26.5■■□□□ 1.83
UBE3D-208ENST00000626828 DENND4BO75064 1496 aaPredicted RBP26.49■■□□□ 1.83
UBE3D-208ENST00000626828 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
UBE3D-208ENST00000626828 SCAPERQ9BY12 1400 aa26.45■■□□□ 1.82
UBE3D-208ENST00000626828 ADGRL1O94910 1474 aa26.43■■□□□ 1.82
UBE3D-208ENST00000626828 ARHGAP5Q13017 1502 aa26.43■■□□□ 1.82
UBE3D-208ENST00000626828 KDM4FA0A1W2PPD8 638 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms