RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
KCNMA1-225ENST00000626620 CARMIL1Q5VZK9 1371 aa17.68■□□□□ 0.42
KCNMA1-225ENST00000626620 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
KCNMA1-225ENST00000626620 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
KCNMA1-225ENST00000626620 CYB5RLQ6IPT4 315 aa17.61■□□□□ 0.41
KCNMA1-225ENST00000626620 FBLN2P98095 1184 aa17.59■□□□□ 0.41
KCNMA1-225ENST00000626620 CTTNBP2Q8WZ74 1663 aa17.58■□□□□ 0.4
KCNMA1-225ENST00000626620 FAM9AQ8IZU1 332 aaPredicted RBP17.58■□□□□ 0.4
KCNMA1-225ENST00000626620 GOLGA3Q08378 1498 aa17.52■□□□□ 0.4
KCNMA1-225ENST00000626620 KIF13AQ9H1H9 1805 aa17.5■□□□□ 0.39
KCNMA1-225ENST00000626620 KIAA0586Q9BVV6 1533 aa17.49■□□□□ 0.39
KCNMA1-225ENST00000626620 IQGAP2Q13576 1575 aa17.46■□□□□ 0.39
KCNMA1-225ENST00000626620 UGGT2Q9NYU1 1516 aa17.43■□□□□ 0.38
KCNMA1-225ENST00000626620 ADCY10Q96PN6 1610 aa17.41■□□□□ 0.38
KCNMA1-225ENST00000626620 SAMD9Q5K651 1589 aa17.41■□□□□ 0.38
KCNMA1-225ENST00000626620 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
KCNMA1-225ENST00000626620 PRG4Q92954 1404 aaPredicted RBP17.39■□□□□ 0.37
KCNMA1-225ENST00000626620 LOC105371045A0A1W2PR82 267 aa17.39■□□□□ 0.37
KCNMA1-225ENST00000626620 MAPKBP1O60336 1514 aa17.38■□□□□ 0.37
KCNMA1-225ENST00000626620 DISP1Q96F81 1524 aa17.38■□□□□ 0.37
KCNMA1-225ENST00000626620 KIAA0556O60303 1618 aa17.33■□□□□ 0.37
KCNMA1-225ENST00000626620 JPH4Q96JJ6 628 aa17.31■□□□□ 0.36
KCNMA1-225ENST00000626620 DIP2BQ9P265 1576 aa17.3■□□□□ 0.36
KCNMA1-225ENST00000626620 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
KCNMA1-225ENST00000626620 EFCAB5A4FU69 1503 aa17.29■□□□□ 0.36
KCNMA1-225ENST00000626620 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
KCNMA1-225ENST00000626620 ABCC10Q5T3U5 1492 aa17.26■□□□□ 0.35
KCNMA1-225ENST00000626620 UBTFP17480 764 aaKnown RBP17.25■□□□□ 0.35
KCNMA1-225ENST00000626620 CEP162Q5TB80 1403 aa17.24■□□□□ 0.35
KCNMA1-225ENST00000626620 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
KCNMA1-225ENST00000626620 UHRF1BP1LA0JNW5 1464 aa17.22■□□□□ 0.35
KCNMA1-225ENST00000626620 PPRC1Q5VV67 1664 aaKnown RBP17.22■□□□□ 0.35
KCNMA1-225ENST00000626620 CLIP1P30622 1438 aa17.18■□□□□ 0.34
KCNMA1-225ENST00000626620 GLI2P10070 1586 aa17.17■□□□□ 0.34
KCNMA1-225ENST00000626620 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
KCNMA1-225ENST00000626620 FHOD3Q2V2M9 1422 aa17.15■□□□□ 0.34
KCNMA1-225ENST00000626620 ABCA8O94911 1581 aa17.15■□□□□ 0.34
KCNMA1-225ENST00000626620 ABCC2Q92887 1545 aa17.14■□□□□ 0.33
KCNMA1-225ENST00000626620 LRRIQ1Q96JM4 1722 aa17.14■□□□□ 0.33
KCNMA1-225ENST00000626620 KDM5BQ9UGL1 1544 aa17.11■□□□□ 0.33
KCNMA1-225ENST00000626620 MAP3K4Q9Y6R4 1608 aa17.11■□□□□ 0.33
KCNMA1-225ENST00000626620 ZCCHC11Q5TAX3 1644 aaKnown RBP17.08■□□□□ 0.33
KCNMA1-225ENST00000626620 RAPGEF6Q8TEU7 1601 aa17.08■□□□□ 0.32
KCNMA1-225ENST00000626620 PLB1Q6P1J6 1458 aa17.07■□□□□ 0.32
KCNMA1-225ENST00000626620 PTPRGP23470 1445 aa17.07■□□□□ 0.32
KCNMA1-225ENST00000626620 PCF11O94913 1555 aaKnown RBP17.07■□□□□ 0.32
KCNMA1-225ENST00000626620 P3H3Q8IVL6 736 aa17.06■□□□□ 0.32
KCNMA1-225ENST00000626620 RANGAP1P46060 587 aaPredicted RBP17.04■□□□□ 0.32
KCNMA1-225ENST00000626620 FMN1Q68DA7 1419 aa17.03■□□□□ 0.32
KCNMA1-225ENST00000626620 UACAQ9BZF9 1416 aa17.03■□□□□ 0.32
KCNMA1-225ENST00000626620 NUP153P49790 1475 aaKnown RBP17.03■□□□□ 0.32
KCNMA1-225ENST00000626620 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.32
KCNMA1-225ENST00000626620 VPS8Q8N3P4 1428 aa17.02■□□□□ 0.31
KCNMA1-225ENST00000626620 TSPOAP1O95153 1857 aa17■□□□□ 0.31
KCNMA1-225ENST00000626620 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
KCNMA1-225ENST00000626620 ASXL2Q76L83 1435 aa17■□□□□ 0.31
KCNMA1-225ENST00000626620 KDM6BO15054 1643 aa16.99■□□□□ 0.31
KCNMA1-225ENST00000626620 HECW1Q76N89 1606 aa16.98■□□□□ 0.31
KCNMA1-225ENST00000626620 EPRSP07814 1512 aaKnown RBP16.98■□□□□ 0.31
KCNMA1-225ENST00000626620 CFAP43Q8NDM7 1665 aa16.95■□□□□ 0.3
KCNMA1-225ENST00000626620 ATP10BO94823 1461 aa16.95■□□□□ 0.3
KCNMA1-225ENST00000626620 FAM69CQ0P6D2 419 aa16.93■□□□□ 0.3
KCNMA1-225ENST00000626620 MAP3K1Q13233 1512 aa16.92■□□□□ 0.3
KCNMA1-225ENST00000626620 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
KCNMA1-225ENST00000626620 MAGI3Q5TCQ9 1506 aa16.91■□□□□ 0.3
KCNMA1-225ENST00000626620 TIAM1Q13009 1591 aa16.89■□□□□ 0.29
KCNMA1-225ENST00000626620 COL17A1Q9UMD9 1497 aaPredicted RBP16.88■□□□□ 0.29
KCNMA1-225ENST00000626620 WDR7Q9Y4E6 1490 aa16.88■□□□□ 0.29
KCNMA1-225ENST00000626620 CCDC18Q5T9S5 1454 aa16.88■□□□□ 0.29
KCNMA1-225ENST00000626620 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
KCNMA1-225ENST00000626620 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
KCNMA1-225ENST00000626620 ABCA9Q8IUA7 1624 aa16.82■□□□□ 0.28
KCNMA1-225ENST00000626620 TEX14Q8IWB6 1497 aa16.79■□□□□ 0.28
KCNMA1-225ENST00000626620 LRRC9Q6ZRR7 1453 aa16.78■□□□□ 0.28
KCNMA1-225ENST00000626620 KIF14Q15058 1648 aa16.77■□□□□ 0.28
KCNMA1-225ENST00000626620 KDM4FA0A1W2PPD8 638 aa16.75■□□□□ 0.27
KCNMA1-225ENST00000626620 EHBP1L1Q8N3D4 1523 aa16.75■□□□□ 0.27
KCNMA1-225ENST00000626620 TROQ12816 1431 aaPredicted RBP16.74■□□□□ 0.27
KCNMA1-225ENST00000626620 ARAP3Q8WWN8 1544 aa16.74■□□□□ 0.27
KCNMA1-225ENST00000626620 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
KCNMA1-225ENST00000626620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.73■□□□□ 0.27
KCNMA1-225ENST00000626620 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
KCNMA1-225ENST00000626620 TTC37Q6PGP7 1564 aa16.72■□□□□ 0.27
KCNMA1-225ENST00000626620 FRMPD1Q5SYB0 1578 aa16.71■□□□□ 0.26
KCNMA1-225ENST00000626620 CDC42BPAQ5VT25 1732 aa16.69■□□□□ 0.26
KCNMA1-225ENST00000626620 SUPT6HQ7KZ85 1726 aaKnown RBP16.69■□□□□ 0.26
KCNMA1-225ENST00000626620 CDC42BPBQ9Y5S2 1711 aa16.67■□□□□ 0.26
KCNMA1-225ENST00000626620 CD109Q6YHK3 1445 aa16.66■□□□□ 0.26
KCNMA1-225ENST00000626620 ATP1B4Q9UN42 357 aaPredicted RBP16.66■□□□□ 0.26
KCNMA1-225ENST00000626620 ADGRL1O94910 1474 aa16.65■□□□□ 0.26
KCNMA1-225ENST00000626620 NCOA2Q15596 1464 aa16.64■□□□□ 0.25
KCNMA1-225ENST00000626620 PREX2Q70Z35 1606 aa16.64■□□□□ 0.25
KCNMA1-225ENST00000626620 PLEKHD1A6NEE1 506 aa16.63■□□□□ 0.25
KCNMA1-225ENST00000626620 RICTORQ6R327 1708 aa16.63■□□□□ 0.25
KCNMA1-225ENST00000626620 MYO5CQ9NQX4 1742 aa16.63■□□□□ 0.25
KCNMA1-225ENST00000626620 AEBP2Q6ZN18 517 aaPredicted RBP16.61■□□□□ 0.25
KCNMA1-225ENST00000626620 MTUS2Q5JR59 1369 aa16.61■□□□□ 0.25
KCNMA1-225ENST00000626620 GPATCH8Q9UKJ3 1502 aaKnown RBP16.61■□□□□ 0.25
KCNMA1-225ENST00000626620 NEO1Q92859 1461 aa16.6■□□□□ 0.25
KCNMA1-225ENST00000626620 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms