RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 NISCHQ9Y2I1 1504 aa25.51■■□□□ 1.67
KCNMA1-225ENST00000626620 CCDC180Q9P1Z9 1646 aa22.72■■□□□ 1.23
KCNMA1-225ENST00000626620 ABCC9O60706 1549 aa22.21■■□□□ 1.15
KCNMA1-225ENST00000626620 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
KCNMA1-225ENST00000626620 ZCCHC6Q5VYS8 1495 aaKnown RBP21.36■■□□□ 1.01
KCNMA1-225ENST00000626620 NACADO15069 1562 aa21.32■■□□□ 1
KCNMA1-225ENST00000626620 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
KCNMA1-225ENST00000626620 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
KCNMA1-225ENST00000626620 UNC13AQ9UPW8 1703 aa21.17■□□□□ 0.98
KCNMA1-225ENST00000626620 BICRAQ9NZM4 1560 aa20.95■□□□□ 0.94
KCNMA1-225ENST00000626620 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
KCNMA1-225ENST00000626620 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
KCNMA1-225ENST00000626620 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
KCNMA1-225ENST00000626620 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
KCNMA1-225ENST00000626620 SCRIBQ14160 1630 aa20.51■□□□□ 0.87
KCNMA1-225ENST00000626620 CC2D2AQ9P2K1 1620 aa20.29■□□□□ 0.84
KCNMA1-225ENST00000626620 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
KCNMA1-225ENST00000626620 CECR2Q9BXF3 1484 aa20.07■□□□□ 0.8
KCNMA1-225ENST00000626620 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
KCNMA1-225ENST00000626620 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
KCNMA1-225ENST00000626620 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
KCNMA1-225ENST00000626620 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
KCNMA1-225ENST00000626620 PEG3Q9GZU2 1588 aa19.62■□□□□ 0.73
KCNMA1-225ENST00000626620 HMGXB3Q12766 1538 aa19.59■□□□□ 0.73
KCNMA1-225ENST00000626620 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
KCNMA1-225ENST00000626620 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
KCNMA1-225ENST00000626620 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
KCNMA1-225ENST00000626620 WIZO95785 1651 aa19.5■□□□□ 0.71
KCNMA1-225ENST00000626620 CUX2O14529 1486 aa19.31■□□□□ 0.68
KCNMA1-225ENST00000626620 TOP2AP11388 1531 aaKnown RBP19.28■□□□□ 0.68
KCNMA1-225ENST00000626620 BAZ1BQ9UIG0 1483 aaKnown RBP19.26■□□□□ 0.67
KCNMA1-225ENST00000626620 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
KCNMA1-225ENST00000626620 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
KCNMA1-225ENST00000626620 NESP48681 1621 aa19.21■□□□□ 0.67
KCNMA1-225ENST00000626620 KIF21AQ7Z4S6 1674 aa19.13■□□□□ 0.65
KCNMA1-225ENST00000626620 ERCC6Q03468 1493 aa19.07■□□□□ 0.64
KCNMA1-225ENST00000626620 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
KCNMA1-225ENST00000626620 DNAJC5Q9H3Z4 198 aa19.04■□□□□ 0.64
KCNMA1-225ENST00000626620 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
KCNMA1-225ENST00000626620 WDR62O43379 1518 aa18.94■□□□□ 0.62
KCNMA1-225ENST00000626620 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
KCNMA1-225ENST00000626620 PDS5BQ9NTI5 1447 aa18.9■□□□□ 0.62
KCNMA1-225ENST00000626620 PRDM2Q13029 1718 aa18.9■□□□□ 0.62
KCNMA1-225ENST00000626620 CFTRP13569 1480 aa18.86■□□□□ 0.61
KCNMA1-225ENST00000626620 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.61
KCNMA1-225ENST00000626620 FANCD2Q9BXW9 1451 aa18.72■□□□□ 0.59
KCNMA1-225ENST00000626620 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
KCNMA1-225ENST00000626620 URB2Q14146 1524 aaKnown RBP18.67■□□□□ 0.58
KCNMA1-225ENST00000626620 ABCC8Q09428 1581 aa18.44■□□□□ 0.54
KCNMA1-225ENST00000626620 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
KCNMA1-225ENST00000626620 TARBP1Q13395 1621 aaKnown RBP18.43■□□□□ 0.54
KCNMA1-225ENST00000626620 CUX1P39880 1505 aa18.43■□□□□ 0.54
KCNMA1-225ENST00000626620 DNMBPQ6XZF7 1577 aa18.43■□□□□ 0.54
KCNMA1-225ENST00000626620 BIVM-ERCC5R4GMW8 1640 aa18.42■□□□□ 0.54
KCNMA1-225ENST00000626620 SYNJ1O43426 1573 aa18.4■□□□□ 0.54
KCNMA1-225ENST00000626620 IFT140Q96RY7 1462 aa18.39■□□□□ 0.53
KCNMA1-225ENST00000626620 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
KCNMA1-225ENST00000626620 EIF4G3O43432 1585 aaKnown RBP18.35■□□□□ 0.53
KCNMA1-225ENST00000626620 ZNF608Q9ULD9 1512 aaPredicted RBP18.34■□□□□ 0.53
KCNMA1-225ENST00000626620 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.52
KCNMA1-225ENST00000626620 WDR97A6NE52 1622 aa18.29■□□□□ 0.52
KCNMA1-225ENST00000626620 POLA1P09884 1462 aaPredicted RBP18.25■□□□□ 0.51
KCNMA1-225ENST00000626620 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
KCNMA1-225ENST00000626620 CHD1O14646 1710 aa18.22■□□□□ 0.51
KCNMA1-225ENST00000626620 RIMBP3CA6NJZ7 1639 aa18.21■□□□□ 0.5
KCNMA1-225ENST00000626620 RIMBP3BA6NNM3 1639 aa18.21■□□□□ 0.5
KCNMA1-225ENST00000626620 RIMBP3Q9UFD9 1639 aa18.21■□□□□ 0.5
KCNMA1-225ENST00000626620 CHIC1Q5VXU3 224 aa18.17■□□□□ 0.5
KCNMA1-225ENST00000626620 RAD54L2Q9Y4B4 1467 aa18.15■□□□□ 0.5
KCNMA1-225ENST00000626620 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
KCNMA1-225ENST00000626620 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
KCNMA1-225ENST00000626620 SOGA1O94964 1423 aa18.1■□□□□ 0.49
KCNMA1-225ENST00000626620 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.49
KCNMA1-225ENST00000626620 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
KCNMA1-225ENST00000626620 ARHGEF11O15085 1522 aa18.09■□□□□ 0.49
KCNMA1-225ENST00000626620 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.48
KCNMA1-225ENST00000626620 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
KCNMA1-225ENST00000626620 TRIM41Q8WV44 630 aa18.01■□□□□ 0.47
KCNMA1-225ENST00000626620 MAGI1Q96QZ7 1491 aaPredicted RBP18■□□□□ 0.47
KCNMA1-225ENST00000626620 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
KCNMA1-225ENST00000626620 SNAPC4Q5SXM2 1469 aa17.96■□□□□ 0.47
KCNMA1-225ENST00000626620 GRIN2BQ13224 1484 aa17.94■□□□□ 0.46
KCNMA1-225ENST00000626620 TDRD9Q8NDG6 1382 aaKnown RBP17.94■□□□□ 0.46
KCNMA1-225ENST00000626620 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
KCNMA1-225ENST00000626620 GAPVD1Q14C86 1478 aa17.92■□□□□ 0.46
KCNMA1-225ENST00000626620 SYNJ2O15056 1496 aa17.91■□□□□ 0.46
KCNMA1-225ENST00000626620 ERICH3Q5RHP9 1530 aa17.91■□□□□ 0.46
KCNMA1-225ENST00000626620 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
KCNMA1-225ENST00000626620 IGF1RP08069 1367 aa17.86■□□□□ 0.45
KCNMA1-225ENST00000626620 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
KCNMA1-225ENST00000626620 SHROOM2Q13796 1616 aa17.84■□□□□ 0.45
KCNMA1-225ENST00000626620 CUL7Q14999 1698 aa17.82■□□□□ 0.44
KCNMA1-225ENST00000626620 EEA1Q15075 1411 aa17.81■□□□□ 0.44
KCNMA1-225ENST00000626620 CEP170Q5SW79 1584 aa17.78■□□□□ 0.44
KCNMA1-225ENST00000626620 PRXQ9BXM0 1461 aa17.78■□□□□ 0.44
KCNMA1-225ENST00000626620 NUP160Q12769 1436 aa17.77■□□□□ 0.43
KCNMA1-225ENST00000626620 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
KCNMA1-225ENST00000626620 FHAD1B1AJZ9 1412 aa17.73■□□□□ 0.43
KCNMA1-225ENST00000626620 KIF21BO75037 1637 aa17.72■□□□□ 0.43
KCNMA1-225ENST00000626620 ERCC6L2Q5T890 1561 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms