RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
NPLOC4-221ENST00000625705 CUX1P39880 1505 aa12.48□□□□□ -0.41
NPLOC4-221ENST00000625705 IFT140Q96RY7 1462 aa12.48□□□□□ -0.41
NPLOC4-221ENST00000625705 AKT1S1Q96B36 256 aa12.47□□□□□ -0.41
NPLOC4-221ENST00000625705 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.42
NPLOC4-221ENST00000625705 FGD5Q6ZNL6 1462 aa12.46□□□□□ -0.42
NPLOC4-221ENST00000625705 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
NPLOC4-221ENST00000625705 FBLN2P98095 1184 aa12.44□□□□□ -0.42
NPLOC4-221ENST00000625705 CHRDL2Q6WN34 429 aa12.43□□□□□ -0.42
NPLOC4-221ENST00000625705 SOGA1O94964 1423 aa12.42□□□□□ -0.42
NPLOC4-221ENST00000625705 TARBP1Q13395 1621 aaKnown RBP12.4□□□□□ -0.42
NPLOC4-221ENST00000625705 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
NPLOC4-221ENST00000625705 RAD54L2Q9Y4B4 1467 aa12.4□□□□□ -0.42
NPLOC4-221ENST00000625705 SYNJ1O43426 1573 aa12.4□□□□□ -0.42
NPLOC4-221ENST00000625705 EIF4G3O43432 1585 aaKnown RBP12.4□□□□□ -0.42
NPLOC4-221ENST00000625705 ZNF608Q9ULD9 1512 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-221ENST00000625705 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
NPLOC4-221ENST00000625705 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-221ENST00000625705 REM2Q8IYK8 340 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-221ENST00000625705 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.434e-14■■■■■ 28.1
NPLOC4-221ENST00000625705 WDR97A6NE52 1622 aa12.34□□□□□ -0.43
NPLOC4-221ENST00000625705 TDRD9Q8NDG6 1382 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-221ENST00000625705 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
NPLOC4-221ENST00000625705 PBRM1Q86U86 1689 aa12.3□□□□□ -0.44
NPLOC4-221ENST00000625705 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
NPLOC4-221ENST00000625705 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
NPLOC4-221ENST00000625705 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
NPLOC4-221ENST00000625705 GAPVD1Q14C86 1478 aa12.28□□□□□ -0.44
NPLOC4-221ENST00000625705 GRIN2BQ13224 1484 aa12.27□□□□□ -0.44
NPLOC4-221ENST00000625705 ABCA5Q8WWZ7 1642 aa12.27□□□□□ -0.44
NPLOC4-221ENST00000625705 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.45
NPLOC4-221ENST00000625705 CHD1O14646 1710 aa12.25□□□□□ -0.45
NPLOC4-221ENST00000625705 PITPNM1O00562 1244 aa12.24□□□□□ -0.45
NPLOC4-221ENST00000625705 MAGI1Q96QZ7 1491 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-221ENST00000625705 DNAJC5Q9H3Z4 198 aa12.23□□□□□ -0.45
NPLOC4-221ENST00000625705 TRIM41Q8WV44 630 aa12.22□□□□□ -0.45
NPLOC4-221ENST00000625705 CHMP7Q8WUX9 453 aaPredicted RBP12.21□□□□□ -0.45
NPLOC4-221ENST00000625705 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-221ENST00000625705 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
NPLOC4-221ENST00000625705 SYNJ2O15056 1496 aa12.19□□□□□ -0.46
NPLOC4-221ENST00000625705 ERICH3Q5RHP9 1530 aa12.18□□□□□ -0.46
NPLOC4-221ENST00000625705 ADAMTS12P58397 1594 aa12.18□□□□□ -0.46
NPLOC4-221ENST00000625705 PIP4P2Q8N4L2 257 aa12.17□□□□□ -0.46
NPLOC4-221ENST00000625705 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
NPLOC4-221ENST00000625705 FHAD1B1AJZ9 1412 aa12.13□□□□□ -0.47
NPLOC4-221ENST00000625705 CUL7Q14999 1698 aa12.13□□□□□ -0.47
NPLOC4-221ENST00000625705 GRIN2AQ12879 1464 aa12.12□□□□□ -0.47
NPLOC4-221ENST00000625705 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
NPLOC4-221ENST00000625705 CLEC11AQ9Y240 323 aa12.08□□□□□ -0.48
NPLOC4-221ENST00000625705 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
NPLOC4-221ENST00000625705 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
NPLOC4-221ENST00000625705 IGF1RP08069 1367 aa12.05□□□□□ -0.48
NPLOC4-221ENST00000625705 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
NPLOC4-221ENST00000625705 RUSC2Q8N2Y8 1516 aa12.04□□□□□ -0.48
NPLOC4-221ENST00000625705 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
NPLOC4-221ENST00000625705 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
NPLOC4-221ENST00000625705 CARMIL1Q5VZK9 1371 aa12.04□□□□□ -0.48
NPLOC4-221ENST00000625705 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
NPLOC4-221ENST00000625705 ARHGEF11O15085 1522 aa12.03□□□□□ -0.48
NPLOC4-221ENST00000625705 NUP160Q12769 1436 aa12.02□□□□□ -0.49
NPLOC4-221ENST00000625705 FAM9AQ8IZU1 332 aaPredicted RBP12□□□□□ -0.49
NPLOC4-221ENST00000625705 EEA1Q15075 1411 aa12□□□□□ -0.49
NPLOC4-221ENST00000625705 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
NPLOC4-221ENST00000625705 KIAA0586Q9BVV6 1533 aa11.94□□□□□ -0.5
NPLOC4-221ENST00000625705 SHROOM2Q13796 1616 aa11.93□□□□□ -0.5
NPLOC4-221ENST00000625705 IQGAP2Q13576 1575 aa11.93□□□□□ -0.5
NPLOC4-221ENST00000625705 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-221ENST00000625705 CYB5RLQ6IPT4 315 aa11.93□□□□□ -0.5
NPLOC4-221ENST00000625705 CTTNBP2Q8WZ74 1663 aa11.93□□□□□ -0.5
NPLOC4-221ENST00000625705 ARAP1Q96P48 1450 aa11.92□□□□□ -0.5
NPLOC4-221ENST00000625705 HAX1O00165 279 aa11.92□□□□□ -0.5
NPLOC4-221ENST00000625705 PRG4Q92954 1404 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-221ENST00000625705 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
NPLOC4-221ENST00000625705 JPH4Q96JJ6 628 aa11.91□□□□□ -0.5
NPLOC4-221ENST00000625705 ERCC6L2Q5T890 1561 aa11.89□□□□□ -0.51
NPLOC4-221ENST00000625705 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
NPLOC4-221ENST00000625705 CARMIL2Q6F5E8 1435 aa11.87□□□□□ -0.51
NPLOC4-221ENST00000625705 KIF21BO75037 1637 aa11.87□□□□□ -0.51
NPLOC4-221ENST00000625705 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-221ENST00000625705 TTBK1Q5TCY1 1321 aaPredicted RBP11.86□□□□□ -0.51
NPLOC4-221ENST00000625705 SPDYE4A6NLX3 237 aa11.85□□□□□ -0.51
NPLOC4-221ENST00000625705 CHADLQ6NUI6 762 aa11.83□□□□□ -0.52
NPLOC4-221ENST00000625705 UBTFP17480 764 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-221ENST00000625705 GOLGA3Q08378 1498 aa11.82□□□□□ -0.52
NPLOC4-221ENST00000625705 UGGT2Q9NYU1 1516 aa11.81□□□□□ -0.52
NPLOC4-221ENST00000625705 RANGAP1P46060 587 aaPredicted RBP11.81□□□□□ -0.52
NPLOC4-221ENST00000625705 KIAA0556O60303 1618 aa11.8□□□□□ -0.52
NPLOC4-221ENST00000625705 EVX2Q03828 476 aa11.8□□□□□ -0.52
NPLOC4-221ENST00000625705 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
NPLOC4-221ENST00000625705 PTPRGP23470 1445 aa11.78□□□□□ -0.52
NPLOC4-221ENST00000625705 DISP1Q96F81 1524 aa11.77□□□□□ -0.52
NPLOC4-221ENST00000625705 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
NPLOC4-221ENST00000625705 P3H3Q8IVL6 736 aa11.74□□□□□ -0.53
NPLOC4-221ENST00000625705 ADCY10Q96PN6 1610 aa11.72□□□□□ -0.53
NPLOC4-221ENST00000625705 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
NPLOC4-221ENST00000625705 SAMD9Q5K651 1589 aa11.71□□□□□ -0.54
NPLOC4-221ENST00000625705 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
NPLOC4-221ENST00000625705 UACAQ9BZF9 1416 aa11.69□□□□□ -0.54
NPLOC4-221ENST00000625705 STAG3Q9UJ98 1225 aa11.68□□□□□ -0.54
NPLOC4-221ENST00000625705 ABCC2Q92887 1545 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms