RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 RRBP1Q9P2E9 1410 aaKnown RBP22.43■■□□□ 1.18
LINC00552-201ENST00000625151 CUX2O14529 1486 aa22.39■■□□□ 1.18
LINC00552-201ENST00000625151 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
LINC00552-201ENST00000625151 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
LINC00552-201ENST00000625151 CCNB3Q8WWL7 1395 aa22.3■■□□□ 1.16
LINC00552-201ENST00000625151 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
LINC00552-201ENST00000625151 IGF1RP08069 1367 aa22.28■■□□□ 1.16
LINC00552-201ENST00000625151 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
LINC00552-201ENST00000625151 TIAM1Q13009 1591 aa22.23■■□□□ 1.15
LINC00552-201ENST00000625151 WDR62O43379 1518 aa22.22■■□□□ 1.15
LINC00552-201ENST00000625151 WDR97A6NE52 1622 aa22.22■■□□□ 1.15
LINC00552-201ENST00000625151 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
LINC00552-201ENST00000625151 ITGAEP38570 1179 aa22.2■■□□□ 1.14
LINC00552-201ENST00000625151 THOC2Q8NI27 1593 aaKnown RBP22.2■■□□□ 1.14
LINC00552-201ENST00000625151 CARMIL1Q5VZK9 1371 aa22.19■■□□□ 1.14
LINC00552-201ENST00000625151 MAP3K1Q13233 1512 aa22.17■■□□□ 1.14
LINC00552-201ENST00000625151 RAB3GAP2Q9H2M9 1393 aa22.13■■□□□ 1.13
LINC00552-201ENST00000625151 ABCA5Q8WWZ7 1642 aa22.12■■□□□ 1.13
LINC00552-201ENST00000625151 LRRC9Q6ZRR7 1453 aa22.12■■□□□ 1.13
LINC00552-201ENST00000625151 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
LINC00552-201ENST00000625151 AQRO60306 1485 aaKnown RBP eCLIP22.1■■□□□ 1.13
LINC00552-201ENST00000625151 GAPVD1Q14C86 1478 aa22.1■■□□□ 1.13
LINC00552-201ENST00000625151 ZNF608Q9ULD9 1512 aaPredicted RBP22.09■■□□□ 1.13
LINC00552-201ENST00000625151 CFAP43Q8NDM7 1665 aa22.08■■□□□ 1.13
LINC00552-201ENST00000625151 PHLDB1Q86UU1 1377 aa22.07■■□□□ 1.12
LINC00552-201ENST00000625151 PCF11O94913 1555 aaKnown RBP22.06■■□□□ 1.12
LINC00552-201ENST00000625151 IFT140Q96RY7 1462 aa22.04■■□□□ 1.12
LINC00552-201ENST00000625151 FHAD1B1AJZ9 1412 aa22.03■■□□□ 1.12
LINC00552-201ENST00000625151 SETD5Q9C0A6 1442 aa22.03■■□□□ 1.12
LINC00552-201ENST00000625151 P3H3Q8IVL6 736 aa21.99■■□□□ 1.11
LINC00552-201ENST00000625151 FHOD3Q2V2M9 1422 aa21.96■■□□□ 1.11
LINC00552-201ENST00000625151 FAM50AQ14320 339 aaKnown RBP21.95■■□□□ 1.11
LINC00552-201ENST00000625151 CUL7Q14999 1698 aa21.95■■□□□ 1.1
LINC00552-201ENST00000625151 PBRM1Q86U86 1689 aa21.95■■□□□ 1.1
LINC00552-201ENST00000625151 ATP1B4Q9UN42 357 aaPredicted RBP21.92■■□□□ 1.1
LINC00552-201ENST00000625151 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
LINC00552-201ENST00000625151 FYCO1Q9BQS8 1478 aa21.91■■□□□ 1.1
LINC00552-201ENST00000625151 CTTNBP2Q8WZ74 1663 aa21.91■■□□□ 1.1
LINC00552-201ENST00000625151 EFCAB5A4FU69 1503 aa21.9■■□□□ 1.1
LINC00552-201ENST00000625151 GRIN2BQ13224 1484 aa21.89■■□□□ 1.1
LINC00552-201ENST00000625151 SIN3AQ96ST3 1273 aa21.89■■□□□ 1.09
LINC00552-201ENST00000625151 CASKIN1Q8WXD9 1431 aa21.87■■□□□ 1.09
LINC00552-201ENST00000625151 SUPT16HQ9Y5B9 1047 aaKnown RBP21.86■■□□□ 1.09
LINC00552-201ENST00000625151 KCNH8Q96L42 1107 aa21.83■■□□□ 1.09
LINC00552-201ENST00000625151 ADAMTS12P58397 1594 aa21.83■■□□□ 1.09
LINC00552-201ENST00000625151 SNAPC4Q5SXM2 1469 aa21.82■■□□□ 1.08
LINC00552-201ENST00000625151 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.79■■□□□ 1.08
LINC00552-201ENST00000625151 FMN1Q68DA7 1419 aa21.75■■□□□ 1.07
LINC00552-201ENST00000625151 LRRIQ1Q96JM4 1722 aa21.75■■□□□ 1.07
LINC00552-201ENST00000625151 FGD6Q6ZV73 1430 aa21.75■■□□□ 1.07
LINC00552-201ENST00000625151 DDX10Q13206 875 aaKnown RBP21.75■■□□□ 1.07
LINC00552-201ENST00000625151 TIMELESSQ9UNS1 1208 aa21.74■■□□□ 1.07
LINC00552-201ENST00000625151 SAMD9Q5K651 1589 aa21.71■■□□□ 1.07
LINC00552-201ENST00000625151 PPP1R15AO75807 674 aaPredicted RBP21.69■■□□□ 1.06
LINC00552-201ENST00000625151 MAGI1Q96QZ7 1491 aaPredicted RBP21.68■■□□□ 1.06
LINC00552-201ENST00000625151 FBLN2P98095 1184 aa21.68■■□□□ 1.06
LINC00552-201ENST00000625151 MTUS2Q5JR59 1369 aa21.68■■□□□ 1.06
LINC00552-201ENST00000625151 CCDC18Q5T9S5 1454 aa21.67■■□□□ 1.06
LINC00552-201ENST00000625151 PTPRKQ15262 1439 aa21.67■■□□□ 1.06
LINC00552-201ENST00000625151 HIRIP3Q9BW71 556 aaPredicted RBP21.67■■□□□ 1.06
LINC00552-201ENST00000625151 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
LINC00552-201ENST00000625151 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
LINC00552-201ENST00000625151 PTPN23Q9H3S7 1636 aa21.65■■□□□ 1.06
LINC00552-201ENST00000625151 HFM1A2PYH4 1435 aa21.63■■□□□ 1.05
LINC00552-201ENST00000625151 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
LINC00552-201ENST00000625151 NCOA2Q15596 1464 aa21.62■■□□□ 1.05
LINC00552-201ENST00000625151 UACAQ9BZF9 1416 aa21.6■■□□□ 1.05
LINC00552-201ENST00000625151 SUPT6HQ7KZ85 1726 aaKnown RBP21.6■■□□□ 1.05
LINC00552-201ENST00000625151 MYOM3Q5VTT5 1437 aa21.59■■□□□ 1.05
LINC00552-201ENST00000625151 TONSLQ96HA7 1378 aa21.58■■□□□ 1.05
LINC00552-201ENST00000625151 NAIPQ13075 1403 aa21.57■■□□□ 1.04
LINC00552-201ENST00000625151 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
LINC00552-201ENST00000625151 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
LINC00552-201ENST00000625151 EHBP1L1Q8N3D4 1523 aa21.56■■□□□ 1.04
LINC00552-201ENST00000625151 MAGI3Q5TCQ9 1506 aa21.52■■□□□ 1.04
LINC00552-201ENST00000625151 KIAA0586Q9BVV6 1533 aa21.52■■□□□ 1.04
LINC00552-201ENST00000625151 UGGT2Q9NYU1 1516 aa21.52■■□□□ 1.04
LINC00552-201ENST00000625151 TSHZ2Q9NRE2 1034 aa21.51■■□□□ 1.03
LINC00552-201ENST00000625151 CCER2I3L3R5 266 aa21.5■■□□□ 1.03
LINC00552-201ENST00000625151 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
LINC00552-201ENST00000625151 ANP32CO43423 234 aa21.5■■□□□ 1.03
LINC00552-201ENST00000625151 NUP160Q12769 1436 aa21.49■■□□□ 1.03
LINC00552-201ENST00000625151 KDM5BQ9UGL1 1544 aa21.49■■□□□ 1.03
LINC00552-201ENST00000625151 BCANQ96GW7 911 aa21.46■■□□□ 1.03
LINC00552-201ENST00000625151 CHD1O14646 1710 aa21.45■■□□□ 1.02
LINC00552-201ENST00000625151 FKBP8Q14318 412 aa21.44■■□□□ 1.02
LINC00552-201ENST00000625151 GCC2Q8IWJ2 1684 aa21.44■■□□□ 1.02
LINC00552-201ENST00000625151 TRIM52Q96A61 297 aa21.43■■□□□ 1.02
LINC00552-201ENST00000625151 DISP1Q96F81 1524 aa21.43■■□□□ 1.02
LINC00552-201ENST00000625151 HECW1Q76N89 1606 aa21.42■■□□□ 1.02
LINC00552-201ENST00000625151 TCOF1Q13428 1488 aaKnown RBP21.42■■□□□ 1.02
LINC00552-201ENST00000625151 RRP7BPQ9NSQ0 103 aa21.41■■□□□ 1.02
LINC00552-201ENST00000625151 DENND4BO75064 1496 aaPredicted RBP21.4■■□□□ 1.02
LINC00552-201ENST00000625151 JPH4Q96JJ6 628 aa21.39■■□□□ 1.01
LINC00552-201ENST00000625151 KDM6BO15054 1643 aa21.39■■□□□ 1.01
LINC00552-201ENST00000625151 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
LINC00552-201ENST00000625151 KIAA0556O60303 1618 aa21.37■■□□□ 1.01
LINC00552-201ENST00000625151 EPRSP07814 1512 aaKnown RBP21.37■■□□□ 1.01
LINC00552-201ENST00000625151 CDK13Q14004 1512 aaKnown RBP21.35■■□□□ 1.01
LINC00552-201ENST00000625151 AKNAQ7Z591 1439 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms