RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
ATRX-216ENST00000624403 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
ATRX-216ENST00000624403 KIF27Q86VH2 1401 aa16.65■□□□□ 0.26
ATRX-216ENST00000624403 POLA1P09884 1462 aaPredicted RBP16.63■□□□□ 0.25
ATRX-216ENST00000624403 CUX2O14529 1486 aa16.62■□□□□ 0.25
ATRX-216ENST00000624403 GOLGA3Q08378 1498 aa16.61■□□□□ 0.25
ATRX-216ENST00000624403 KIF21BO75037 1637 aa16.61■□□□□ 0.25
ATRX-216ENST00000624403 MRC2Q9UBG0 1479 aa16.6■□□□□ 0.25
ATRX-216ENST00000624403 RAD54L2Q9Y4B4 1467 aa16.6■□□□□ 0.25
ATRX-216ENST00000624403 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
ATRX-216ENST00000624403 TNIKQ9UKE5 1360 aa16.56■□□□□ 0.24
ATRX-216ENST00000624403 PRXQ9BXM0 1461 aa16.54■□□□□ 0.24
ATRX-216ENST00000624403 POLA2Q14181 598 aa16.54■□□□□ 0.24
ATRX-216ENST00000624403 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
ATRX-216ENST00000624403 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
ATRX-216ENST00000624403 UBTFP17480 764 aaKnown RBP16.53■□□□□ 0.24
ATRX-216ENST00000624403 IGF1RP08069 1367 aa16.51■□□□□ 0.23
ATRX-216ENST00000624403 WDR62O43379 1518 aa16.5■□□□□ 0.23
ATRX-216ENST00000624403 ERICH3Q5RHP9 1530 aa16.5■□□□□ 0.23
ATRX-216ENST00000624403 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
ATRX-216ENST00000624403 CEP162Q5TB80 1403 aa16.47■□□□□ 0.23
ATRX-216ENST00000624403 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
ATRX-216ENST00000624403 THOC2Q8NI27 1593 aaKnown RBP16.45■□□□□ 0.22
ATRX-216ENST00000624403 TDRD9Q8NDG6 1382 aaKnown RBP16.43■□□□□ 0.22
ATRX-216ENST00000624403 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
ATRX-216ENST00000624403 CARMIL1Q5VZK9 1371 aa16.42■□□□□ 0.22
ATRX-216ENST00000624403 ATXN8OSP0DMR3 200 aa16.42■□□□□ 0.22
ATRX-216ENST00000624403 POTEHQ6S545 545 aa16.41■□□□□ 0.22
ATRX-216ENST00000624403 GAPVD1Q14C86 1478 aa16.39■□□□□ 0.21
ATRX-216ENST00000624403 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
ATRX-216ENST00000624403 CUL7Q14999 1698 aa16.36■□□□□ 0.21
ATRX-216ENST00000624403 CLIP1P30622 1438 aa16.35■□□□□ 0.21
ATRX-216ENST00000624403 AQRO60306 1485 aaKnown RBP eCLIP16.32■□□□□ 0.2
ATRX-216ENST00000624403 ZNF608Q9ULD9 1512 aaPredicted RBP16.31■□□□□ 0.2
ATRX-216ENST00000624403 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
ATRX-216ENST00000624403 RANGAP1P46060 587 aaPredicted RBP16.28■□□□□ 0.2
ATRX-216ENST00000624403 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
ATRX-216ENST00000624403 EIF4G3O43432 1585 aaKnown RBP16.23■□□□□ 0.19
ATRX-216ENST00000624403 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
ATRX-216ENST00000624403 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
ATRX-216ENST00000624403 ARAP1Q96P48 1450 aa16.21■□□□□ 0.19
ATRX-216ENST00000624403 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
ATRX-216ENST00000624403 ARHGAP35Q9NRY4 1499 aa16.18■□□□□ 0.18
ATRX-216ENST00000624403 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
ATRX-216ENST00000624403 CTTNBP2Q8WZ74 1663 aa16.15■□□□□ 0.18
ATRX-216ENST00000624403 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
ATRX-216ENST00000624403 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
ATRX-216ENST00000624403 TRIM26Q12899 539 aaPredicted RBP16.13■□□□□ 0.17
ATRX-216ENST00000624403 ZBTB12Q9Y330 459 aaPredicted RBP16.13■□□□□ 0.17
ATRX-216ENST00000624403 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
ATRX-216ENST00000624403 EFCAB5A4FU69 1503 aa16.09■□□□□ 0.17
ATRX-216ENST00000624403 GRIN2AQ12879 1464 aa16.08■□□□□ 0.16
ATRX-216ENST00000624403 SYNJ2O15056 1496 aa16.07■□□□□ 0.16
ATRX-216ENST00000624403 RBM42Q9BTD8 480 aaKnown RBP16.05■□□□□ 0.16
ATRX-216ENST00000624403 P3H3Q8IVL6 736 aa16.04■□□□□ 0.16
ATRX-216ENST00000624403 FHOD3Q2V2M9 1422 aa16.03■□□□□ 0.16
ATRX-216ENST00000624403 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
ATRX-216ENST00000624403 IQGAP2Q13576 1575 aa16.02■□□□□ 0.16
ATRX-216ENST00000624403 SAMD9Q5K651 1589 aa16.02■□□□□ 0.16
ATRX-216ENST00000624403 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
ATRX-216ENST00000624403 KIAA0586Q9BVV6 1533 aa16■□□□□ 0.15
ATRX-216ENST00000624403 FBLN2P98095 1184 aa15.99■□□□□ 0.15
ATRX-216ENST00000624403 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
ATRX-216ENST00000624403 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
ATRX-216ENST00000624403 NUP160Q12769 1436 aa15.96■□□□□ 0.15
ATRX-216ENST00000624403 UGGT2Q9NYU1 1516 aa15.96■□□□□ 0.15
ATRX-216ENST00000624403 PCF11O94913 1555 aaKnown RBP15.95■□□□□ 0.14
ATRX-216ENST00000624403 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
ATRX-216ENST00000624403 CASKIN1Q8WXD9 1431 aa15.93■□□□□ 0.14
ATRX-216ENST00000624403 FYCO1Q9BQS8 1478 aa15.91■□□□□ 0.14
ATRX-216ENST00000624403 MAP3K1Q13233 1512 aa15.91■□□□□ 0.14
ATRX-216ENST00000624403 KANK4Q5T7N3 995 aaPredicted RBP15.91■□□□□ 0.14
ATRX-216ENST00000624403 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
ATRX-216ENST00000624403 TIAM1Q13009 1591 aa15.89■□□□□ 0.13
ATRX-216ENST00000624403 DISP1Q96F81 1524 aa15.89■□□□□ 0.13
ATRX-216ENST00000624403 CHD1O14646 1710 aa15.87■□□□□ 0.13
ATRX-216ENST00000624403 KIAA0556O60303 1618 aa15.86■□□□□ 0.13
ATRX-216ENST00000624403 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
ATRX-216ENST00000624403 CFAP43Q8NDM7 1665 aa15.84■□□□□ 0.13
ATRX-216ENST00000624403 JPH4Q96JJ6 628 aa15.83■□□□□ 0.12
ATRX-216ENST00000624403 LRRC9Q6ZRR7 1453 aa15.82■□□□□ 0.12
ATRX-216ENST00000624403 CARMIL2Q6F5E8 1435 aa15.79■□□□□ 0.12
ATRX-216ENST00000624403 AKT1S1Q96B36 256 aa15.79■□□□□ 0.12
ATRX-216ENST00000624403 HECW1Q76N89 1606 aa15.77■□□□□ 0.12
ATRX-216ENST00000624403 LRRIQ1Q96JM4 1722 aa15.76■□□□□ 0.11
ATRX-216ENST00000624403 PRG4Q92954 1404 aaPredicted RBP15.75■□□□□ 0.11
ATRX-216ENST00000624403 CCDC18Q5T9S5 1454 aa15.74■□□□□ 0.11
ATRX-216ENST00000624403 SHROOM2Q13796 1616 aa15.72■□□□□ 0.11
ATRX-216ENST00000624403 EPRSP07814 1512 aaKnown RBP15.72■□□□□ 0.11
ATRX-216ENST00000624403 CLASP1Q7Z460 1538 aa15.72■□□□□ 0.11
ATRX-216ENST00000624403 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
ATRX-216ENST00000624403 RRBP1Q9P2E9 1410 aaKnown RBP15.71■□□□□ 0.11
ATRX-216ENST00000624403 MTUS2Q5JR59 1369 aa15.7■□□□□ 0.1
ATRX-216ENST00000624403 CDK13Q14004 1512 aaKnown RBP15.69■□□□□ 0.1
ATRX-216ENST00000624403 SPDYE2BA6NHP3 402 aa15.69■□□□□ 0.1
ATRX-216ENST00000624403 SPDYE6P0CI01 402 aa15.69■□□□□ 0.1
ATRX-216ENST00000624403 HRCP23327 699 aa15.69■□□□□ 0.1
ATRX-216ENST00000624403 SPDYE2Q495Y8 402 aa15.69■□□□□ 0.1
ATRX-216ENST00000624403 PHLDB1Q86UU1 1377 aa15.69■□□□□ 0.1
ATRX-216ENST00000624403 NUP153P49790 1475 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms