RNA–Protein interactions for RNA: ENST00000624160.1

AC004009.3-201, humanhuman

BASIC

Gene AC004009.3, Length 645 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.3-201ENST00000624160 POLA2Q14181 598 aa13.95□□□□□ -0.18
AC004009.3-201ENST00000624160 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
AC004009.3-201ENST00000624160 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
AC004009.3-201ENST00000624160 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
AC004009.3-201ENST00000624160 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
AC004009.3-201ENST00000624160 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
AC004009.3-201ENST00000624160 SYNJ1O43426 1573 aa13.9□□□□□ -0.18
AC004009.3-201ENST00000624160 SOGA1O94964 1423 aa13.89□□□□□ -0.19
AC004009.3-201ENST00000624160 TRIM41Q8WV44 630 aa13.88□□□□□ -0.19
AC004009.3-201ENST00000624160 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
AC004009.3-201ENST00000624160 MKRN4PQ13434 485 aaPredicted RBP13.86□□□□□ -0.19
AC004009.3-201ENST00000624160 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
AC004009.3-201ENST00000624160 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
AC004009.3-201ENST00000624160 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
AC004009.3-201ENST00000624160 ABCA10Q8WWZ4 1543 aa13.81□□□□□ -0.2
AC004009.3-201ENST00000624160 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
AC004009.3-201ENST00000624160 ABCB7O75027 752 aa13.78□□□□□ -0.2
AC004009.3-201ENST00000624160 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
AC004009.3-201ENST00000624160 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
AC004009.3-201ENST00000624160 KIF27Q86VH2 1401 aa13.74□□□□□ -0.21
AC004009.3-201ENST00000624160 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
AC004009.3-201ENST00000624160 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
AC004009.3-201ENST00000624160 AQRO60306 1485 aaKnown RBP eCLIP13.72□□□□□ -0.21
AC004009.3-201ENST00000624160 GRIN2BQ13224 1484 aa13.72□□□□□ -0.21
AC004009.3-201ENST00000624160 ABCA5Q8WWZ7 1642 aa13.71□□□□□ -0.22
AC004009.3-201ENST00000624160 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
AC004009.3-201ENST00000624160 MAGI1Q96QZ7 1491 aaPredicted RBP13.67□□□□□ -0.22
AC004009.3-201ENST00000624160 EEA1Q15075 1411 aa13.67□□□□□ -0.22
AC004009.3-201ENST00000624160 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
AC004009.3-201ENST00000624160 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
AC004009.3-201ENST00000624160 PROM2Q8N271 834 aa13.64□□□□□ -0.23
AC004009.3-201ENST00000624160 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
AC004009.3-201ENST00000624160 CUL7Q14999 1698 aa13.61□□□□□ -0.23
AC004009.3-201ENST00000624160 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
AC004009.3-201ENST00000624160 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
AC004009.3-201ENST00000624160 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
AC004009.3-201ENST00000624160 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
AC004009.3-201ENST00000624160 IGF1RP08069 1367 aa13.58□□□□□ -0.23
AC004009.3-201ENST00000624160 DSG3P32926 999 aa13.57□□□□□ -0.24
AC004009.3-201ENST00000624160 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
AC004009.3-201ENST00000624160 CARMIL1Q5VZK9 1371 aa13.55□□□□□ -0.24
AC004009.3-201ENST00000624160 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
AC004009.3-201ENST00000624160 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
AC004009.3-201ENST00000624160 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
AC004009.3-201ENST00000624160 GRIN2AQ12879 1464 aa13.52□□□□□ -0.25
AC004009.3-201ENST00000624160 CHD1O14646 1710 aa13.51□□□□□ -0.25
AC004009.3-201ENST00000624160 RAPGEF2Q9Y4G8 1499 aa13.51□□□□□ -0.25
AC004009.3-201ENST00000624160 FAM9AQ8IZU1 332 aaPredicted RBP13.5□□□□□ -0.25
AC004009.3-201ENST00000624160 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
AC004009.3-201ENST00000624160 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
AC004009.3-201ENST00000624160 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
AC004009.3-201ENST00000624160 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
AC004009.3-201ENST00000624160 NUP160Q12769 1436 aa13.44□□□□□ -0.26
AC004009.3-201ENST00000624160 KIF21BO75037 1637 aa13.43□□□□□ -0.26
AC004009.3-201ENST00000624160 CACNB1Q02641 598 aaPredicted RBP13.43□□□□□ -0.26
AC004009.3-201ENST00000624160 KIAA0586Q9BVV6 1533 aa13.4□□□□□ -0.26
AC004009.3-201ENST00000624160 GOLGA3Q08378 1498 aa13.4□□□□□ -0.26
AC004009.3-201ENST00000624160 CEP170Q5SW79 1584 aa13.4□□□□□ -0.26
AC004009.3-201ENST00000624160 IFNLR1Q8IU57 520 aaPredicted RBP13.38□□□□□ -0.27
AC004009.3-201ENST00000624160 CLASP1Q7Z460 1538 aa13.38□□□□□ -0.27
AC004009.3-201ENST00000624160 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
AC004009.3-201ENST00000624160 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
AC004009.3-201ENST00000624160 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
AC004009.3-201ENST00000624160 IQGAP2Q13576 1575 aa13.36□□□□□ -0.27
AC004009.3-201ENST00000624160 CTTNBP2Q8WZ74 1663 aa13.35□□□□□ -0.27
AC004009.3-201ENST00000624160 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
AC004009.3-201ENST00000624160 JPH4Q96JJ6 628 aa13.32□□□□□ -0.28
AC004009.3-201ENST00000624160 SSUH2Q9Y2M2 353 aa13.32□□□□□ -0.28
AC004009.3-201ENST00000624160 CARMIL2Q6F5E8 1435 aa13.31□□□□□ -0.28
AC004009.3-201ENST00000624160 SHROOM2Q13796 1616 aa13.3□□□□□ -0.28
AC004009.3-201ENST00000624160 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
AC004009.3-201ENST00000624160 PRG4Q92954 1404 aaPredicted RBP13.28□□□□□ -0.28
AC004009.3-201ENST00000624160 UGGT2Q9NYU1 1516 aa13.27□□□□□ -0.29
AC004009.3-201ENST00000624160 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
AC004009.3-201ENST00000624160 TNIKQ9UKE5 1360 aa13.25□□□□□ -0.29
AC004009.3-201ENST00000624160 SPOCK2Q92563 424 aa13.24□□□□□ -0.29
AC004009.3-201ENST00000624160 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
AC004009.3-201ENST00000624160 EFCAB5A4FU69 1503 aa13.23□□□□□ -0.29
AC004009.3-201ENST00000624160 RIMBP3CA6NJZ7 1639 aa13.21□□□□□ -0.29
AC004009.3-201ENST00000624160 RIMBP3BA6NNM3 1639 aa13.21□□□□□ -0.29
AC004009.3-201ENST00000624160 RIMBP3Q9UFD9 1639 aa13.21□□□□□ -0.29
AC004009.3-201ENST00000624160 MIER1Q8N108 512 aa13.21□□□□□ -0.29
AC004009.3-201ENST00000624160 KIAA0556O60303 1618 aa13.2□□□□□ -0.3
AC004009.3-201ENST00000624160 RANGAP1P46060 587 aaPredicted RBP13.19□□□□□ -0.3
AC004009.3-201ENST00000624160 DISP1Q96F81 1524 aa13.18□□□□□ -0.3
AC004009.3-201ENST00000624160 SAMD9Q5K651 1589 aa13.17□□□□□ -0.3
AC004009.3-201ENST00000624160 PTPRGP23470 1445 aa13.17□□□□□ -0.3
AC004009.3-201ENST00000624160 CLIP1P30622 1438 aa13.15□□□□□ -0.3
AC004009.3-201ENST00000624160 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
AC004009.3-201ENST00000624160 CYB5RLQ6IPT4 315 aa13.14□□□□□ -0.31
AC004009.3-201ENST00000624160 ARAP1Q96P48 1450 aa13.14□□□□□ -0.31
AC004009.3-201ENST00000624160 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
AC004009.3-201ENST00000624160 CEP162Q5TB80 1403 aa13.13□□□□□ -0.31
AC004009.3-201ENST00000624160 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
AC004009.3-201ENST00000624160 PKD2Q13563 968 aa13.12□□□□□ -0.31
AC004009.3-201ENST00000624160 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
AC004009.3-201ENST00000624160 P3H3Q8IVL6 736 aa13.11□□□□□ -0.31
AC004009.3-201ENST00000624160 TTBK1Q5TCY1 1321 aaPredicted RBP13.11□□□□□ -0.31
AC004009.3-201ENST00000624160 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
AC004009.3-201ENST00000624160 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms