RNA–Protein interactions for RNA: ENST00000624160.1

AC004009.3-201, humanhuman

BASIC

Gene AC004009.3, Length 645 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.3-201ENST00000624160 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
AC004009.3-201ENST00000624160 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
AC004009.3-201ENST00000624160 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
AC004009.3-201ENST00000624160 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
AC004009.3-201ENST00000624160 NISCHQ9Y2I1 1504 aa19.37■□□□□ 0.69
AC004009.3-201ENST00000624160 PLPPR3Q6T4P5 718 aa18.98■□□□□ 0.63
AC004009.3-201ENST00000624160 FOXD1Q16676 465 aa17.94■□□□□ 0.46
AC004009.3-201ENST00000624160 ADRA2BP18089 450 aa17.73■□□□□ 0.43
AC004009.3-201ENST00000624160 PPP6R1Q9UPN7 881 aa17.64■□□□□ 0.41
AC004009.3-201ENST00000624160 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
AC004009.3-201ENST00000624160 PIAS4Q8N2W9 510 aaPredicted RBP17.15■□□□□ 0.34
AC004009.3-201ENST00000624160 KCNA4P22459 653 aa16.93■□□□□ 0.3
AC004009.3-201ENST00000624160 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
AC004009.3-201ENST00000624160 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
AC004009.3-201ENST00000624160 ABCC9O60706 1549 aa16.52■□□□□ 0.24
AC004009.3-201ENST00000624160 EHMT2Q96KQ7 1210 aa16.47■□□□□ 0.23
AC004009.3-201ENST00000624160 MSH5O43196 834 aa16.45■□□□□ 0.22
AC004009.3-201ENST00000624160 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
AC004009.3-201ENST00000624160 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
AC004009.3-201ENST00000624160 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
AC004009.3-201ENST00000624160 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
AC004009.3-201ENST00000624160 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
AC004009.3-201ENST00000624160 DCAF8L2P0C7V8 631 aa16.13■□□□□ 0.17
AC004009.3-201ENST00000624160 NACADO15069 1562 aa16.11■□□□□ 0.17
AC004009.3-201ENST00000624160 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
AC004009.3-201ENST00000624160 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
AC004009.3-201ENST00000624160 RB1CC1Q8TDY2 1594 aa16.08■□□□□ 0.16
AC004009.3-201ENST00000624160 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
AC004009.3-201ENST00000624160 MAPK8IP2Q13387 824 aaPredicted RBP15.9■□□□□ 0.14
AC004009.3-201ENST00000624160 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
AC004009.3-201ENST00000624160 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
AC004009.3-201ENST00000624160 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
AC004009.3-201ENST00000624160 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
AC004009.3-201ENST00000624160 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
AC004009.3-201ENST00000624160 ZBTB22O15209 634 aa15.51■□□□□ 0.07
AC004009.3-201ENST00000624160 FOXD4L1Q9NU39 408 aa15.5■□□□□ 0.07
AC004009.3-201ENST00000624160 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
AC004009.3-201ENST00000624160 HOXD11P31277 338 aaPredicted RBP15.46■□□□□ 0.07
AC004009.3-201ENST00000624160 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
AC004009.3-201ENST00000624160 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
AC004009.3-201ENST00000624160 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
AC004009.3-201ENST00000624160 EIF4G1Q04637 1599 aaKnown RBP15.09■□□□□ 0.01
AC004009.3-201ENST00000624160 DCAF8L1A6NGE4 600 aa15.06■□□□□ 0
AC004009.3-201ENST00000624160 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
AC004009.3-201ENST00000624160 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
AC004009.3-201ENST00000624160 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
AC004009.3-201ENST00000624160 SMARCA4P51532 1647 aa14.98□□□□□ -0.01
AC004009.3-201ENST00000624160 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
AC004009.3-201ENST00000624160 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
AC004009.3-201ENST00000624160 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
AC004009.3-201ENST00000624160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
AC004009.3-201ENST00000624160 MROH2BQ7Z745 1585 aa14.89□□□□□ -0.03
AC004009.3-201ENST00000624160 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
AC004009.3-201ENST00000624160 ATAD2BQ9ULI0 1458 aa14.84□□□□□ -0.03
AC004009.3-201ENST00000624160 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
AC004009.3-201ENST00000624160 RSF1Q96T23 1441 aaPredicted RBP14.82□□□□□ -0.04
AC004009.3-201ENST00000624160 HMGXB3Q12766 1538 aa14.8□□□□□ -0.04
AC004009.3-201ENST00000624160 BAZ1BQ9UIG0 1483 aaKnown RBP14.78□□□□□ -0.04
AC004009.3-201ENST00000624160 WIZO95785 1651 aa14.74□□□□□ -0.05
AC004009.3-201ENST00000624160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
AC004009.3-201ENST00000624160 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
AC004009.3-201ENST00000624160 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
AC004009.3-201ENST00000624160 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
AC004009.3-201ENST00000624160 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
AC004009.3-201ENST00000624160 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
AC004009.3-201ENST00000624160 APLP2Q06481 763 aa14.5□□□□□ -0.09
AC004009.3-201ENST00000624160 FKBP8Q14318 412 aa14.47□□□□□ -0.09
AC004009.3-201ENST00000624160 ATF5Q9Y2D1 282 aaPredicted RBP14.46□□□□□ -0.09
AC004009.3-201ENST00000624160 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
AC004009.3-201ENST00000624160 LAMC3Q9Y6N6 1575 aa14.43□□□□□ -0.1
AC004009.3-201ENST00000624160 CADPSQ9ULU8 1353 aa14.41□□□□□ -0.1
AC004009.3-201ENST00000624160 CFTRP13569 1480 aa14.37□□□□□ -0.11
AC004009.3-201ENST00000624160 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
AC004009.3-201ENST00000624160 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
AC004009.3-201ENST00000624160 NESP48681 1621 aa14.32□□□□□ -0.12
AC004009.3-201ENST00000624160 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
AC004009.3-201ENST00000624160 PRDM2Q13029 1718 aa14.27□□□□□ -0.12
AC004009.3-201ENST00000624160 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
AC004009.3-201ENST00000624160 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
AC004009.3-201ENST00000624160 POTEDQ86YR6 584 aa14.23□□□□□ -0.13
AC004009.3-201ENST00000624160 KIF21AQ7Z4S6 1674 aa14.18□□□□□ -0.14
AC004009.3-201ENST00000624160 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
AC004009.3-201ENST00000624160 MRC2Q9UBG0 1479 aa14.15□□□□□ -0.14
AC004009.3-201ENST00000624160 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
AC004009.3-201ENST00000624160 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
AC004009.3-201ENST00000624160 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
AC004009.3-201ENST00000624160 WDR62O43379 1518 aa14.08□□□□□ -0.16
AC004009.3-201ENST00000624160 CUX2O14529 1486 aa14.07□□□□□ -0.16
AC004009.3-201ENST00000624160 RNF39Q9H2S5 420 aa14.06□□□□□ -0.16
AC004009.3-201ENST00000624160 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
AC004009.3-201ENST00000624160 CAPN15O75808 1086 aa14.05□□□□□ -0.16
AC004009.3-201ENST00000624160 RTN4Q9NQC3 1192 aaKnown RBP14.04□□□□□ -0.16
AC004009.3-201ENST00000624160 FBLN2P98095 1184 aa14.03□□□□□ -0.16
AC004009.3-201ENST00000624160 WRNQ14191 1432 aaPredicted RBP eCLIP14.03□□□□□ -0.16
AC004009.3-201ENST00000624160 URB2Q14146 1524 aaKnown RBP14.03□□□□□ -0.16
AC004009.3-201ENST00000624160 TOPBP1Q92547 1522 aa14.02□□□□□ -0.16
AC004009.3-201ENST00000624160 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
AC004009.3-201ENST00000624160 C1QBPQ07021 282 aaKnown RBP13.99□□□□□ -0.17
AC004009.3-201ENST00000624160 CUX1P39880 1505 aa13.96□□□□□ -0.17
AC004009.3-201ENST00000624160 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms