RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 KIF13AQ9H1H9 1805 aa10.05□□□□□ -0.8
FMR1-217ENST00000620828 DISP1Q96F81 1524 aa10.04□□□□□ -0.8
FMR1-217ENST00000620828 IQGAP2Q13576 1575 aa10.04□□□□□ -0.8
FMR1-217ENST00000620828 SAMD9Q5K651 1589 aa10.02□□□□□ -0.81
FMR1-217ENST00000620828 KIF21BO75037 1637 aa10.02□□□□□ -0.81
FMR1-217ENST00000620828 KIAA0556O60303 1618 aa10.01□□□□□ -0.81
FMR1-217ENST00000620828 RAPGEF2Q9Y4G8 1499 aa10.01□□□□□ -0.81
FMR1-217ENST00000620828 CARMIL1Q5VZK9 1371 aa9.99□□□□□ -0.81
FMR1-217ENST00000620828 CHMP7Q8WUX9 453 aaPredicted RBP9.99□□□□□ -0.81
FMR1-217ENST00000620828 MAPKBP1O60336 1514 aa9.99□□□□□ -0.81
FMR1-217ENST00000620828 UHRF1BP1LA0JNW5 1464 aa9.98□□□□□ -0.81
FMR1-217ENST00000620828 PRG4Q92954 1404 aaPredicted RBP9.96□□□□□ -0.81
FMR1-217ENST00000620828 PPRC1Q5VV67 1664 aaKnown RBP9.96□□□□□ -0.82
FMR1-217ENST00000620828 EEA1Q15075 1411 aa9.95□□□□□ -0.82
FMR1-217ENST00000620828 ABCA8O94911 1581 aa9.94□□□□□ -0.82
FMR1-217ENST00000620828 DIP2BQ9P265 1576 aa9.93□□□□□ -0.82
FMR1-217ENST00000620828 GLI2P10070 1586 aa9.91□□□□□ -0.82
FMR1-217ENST00000620828 ZCCHC11Q5TAX3 1644 aaKnown RBP9.9□□□□□ -0.82
FMR1-217ENST00000620828 ABCC2Q92887 1545 aa9.9□□□□□ -0.82
FMR1-217ENST00000620828 KDM5BQ9UGL1 1544 aa9.9□□□□□ -0.82
FMR1-217ENST00000620828 JPH4Q96JJ6 628 aa9.89□□□□□ -0.83
FMR1-217ENST00000620828 MAP3K4Q9Y6R4 1608 aa9.89□□□□□ -0.83
FMR1-217ENST00000620828 FBLN2P98095 1184 aa9.88□□□□□ -0.83
FMR1-217ENST00000620828 LRRIQ1Q96JM4 1722 aa9.87□□□□□ -0.83
FMR1-217ENST00000620828 ABCC10Q5T3U5 1492 aa9.85□□□□□ -0.83
FMR1-217ENST00000620828 TNIKQ9UKE5 1360 aa9.85□□□□□ -0.83
FMR1-217ENST00000620828 EFCAB5A4FU69 1503 aa9.83□□□□□ -0.84
FMR1-217ENST00000620828 CYB5RLQ6IPT4 315 aa9.83□□□□□ -0.84
FMR1-217ENST00000620828 CHIC1Q5VXU3 224 aa9.82□□□□□ -0.84
FMR1-217ENST00000620828 GOLGA3Q08378 1498 aa9.82□□□□□ -0.84
FMR1-217ENST00000620828 RAPGEF6Q8TEU7 1601 aa9.81□□□□□ -0.84
FMR1-217ENST00000620828 UACAQ9BZF9 1416 aa9.8□□□□□ -0.84
FMR1-217ENST00000620828 TRIM41Q8WV44 630 aa9.8□□□□□ -0.84
FMR1-217ENST00000620828 CARMIL2Q6F5E8 1435 aa9.79□□□□□ -0.84
FMR1-217ENST00000620828 CFAP43Q8NDM7 1665 aa9.79□□□□□ -0.84
FMR1-217ENST00000620828 CSRNP3Q8WYN3 585 aa9.77□□□□□ -0.84
FMR1-217ENST00000620828 PTPRGP23470 1445 aa9.77□□□□□ -0.85
FMR1-217ENST00000620828 ABCA9Q8IUA7 1624 aa9.77□□□□□ -0.85
FMR1-217ENST00000620828 PLB1Q6P1J6 1458 aa9.77□□□□□ -0.85
FMR1-217ENST00000620828 EPRSP07814 1512 aaKnown RBP9.77□□□□□ -0.85
FMR1-217ENST00000620828 NUP153P49790 1475 aaKnown RBP9.75□□□□□ -0.85
FMR1-217ENST00000620828 ARHGAP35Q9NRY4 1499 aa9.74□□□□□ -0.85
FMR1-217ENST00000620828 ASXL2Q76L83 1435 aa9.73□□□□□ -0.85
FMR1-217ENST00000620828 ATP10BO94823 1461 aa9.72□□□□□ -0.85
FMR1-217ENST00000620828 WDR7Q9Y4E6 1490 aa9.71□□□□□ -0.85
FMR1-217ENST00000620828 MAGI3Q5TCQ9 1506 aa9.71□□□□□ -0.86
FMR1-217ENST00000620828 FRMPD1Q5SYB0 1578 aa9.69□□□□□ -0.86
FMR1-217ENST00000620828 TSPOAP1O95153 1857 aa9.68□□□□□ -0.86
FMR1-217ENST00000620828 HECW1Q76N89 1606 aa9.67□□□□□ -0.86
FMR1-217ENST00000620828 PCF11O94913 1555 aaKnown RBP9.66□□□□□ -0.86
FMR1-217ENST00000620828 RICTORQ6R327 1708 aa9.65□□□□□ -0.86
FMR1-217ENST00000620828 ARAP3Q8WWN8 1544 aa9.65□□□□□ -0.86
FMR1-217ENST00000620828 COL17A1Q9UMD9 1497 aaPredicted RBP9.65□□□□□ -0.86
FMR1-217ENST00000620828 TTC37Q6PGP7 1564 aa9.65□□□□□ -0.87
FMR1-217ENST00000620828 FHOD3Q2V2M9 1422 aa9.65□□□□□ -0.87
FMR1-217ENST00000620828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.64□□□□□ -0.87
FMR1-217ENST00000620828 KDM6BO15054 1643 aa9.63□□□□□ -0.87
FMR1-217ENST00000620828 CDC42BPBQ9Y5S2 1711 aa9.62□□□□□ -0.87
FMR1-217ENST00000620828 SIGLEC1Q9BZZ2 1709 aa9.62□□□□□ -0.87
FMR1-217ENST00000620828 KIF14Q15058 1648 aa9.61□□□□□ -0.87
FMR1-217ENST00000620828 CASKIN1Q8WXD9 1431 aa9.6□□□□□ -0.87
FMR1-217ENST00000620828 CFAP74Q9C0B2 1584 aa9.6□□□□□ -0.87
FMR1-217ENST00000620828 ZMYM4Q5VZL5 1548 aa9.6□□□□□ -0.87
FMR1-217ENST00000620828 FYCO1Q9BQS8 1478 aa9.6□□□□□ -0.87
FMR1-217ENST00000620828 CDC42BPAQ5VT25 1732 aa9.6□□□□□ -0.87
FMR1-217ENST00000620828 MYO5CQ9NQX4 1742 aa9.6□□□□□ -0.87
FMR1-217ENST00000620828 CDK13Q14004 1512 aaKnown RBP9.59□□□□□ -0.87
FMR1-217ENST00000620828 PREX2Q70Z35 1606 aa9.59□□□□□ -0.87
FMR1-217ENST00000620828 FMN1Q68DA7 1419 aa9.58□□□□□ -0.88
FMR1-217ENST00000620828 TEX14Q8IWB6 1497 aa9.57□□□□□ -0.88
FMR1-217ENST00000620828 NEO1Q92859 1461 aa9.57□□□□□ -0.88
FMR1-217ENST00000620828 ITSN2Q9NZM3 1697 aa9.55□□□□□ -0.88
FMR1-217ENST00000620828 CCDC18Q5T9S5 1454 aa9.55□□□□□ -0.88
FMR1-217ENST00000620828 KDM5CP41229 1560 aa9.55□□□□□ -0.88
FMR1-217ENST00000620828 FAM69CQ0P6D2 419 aa9.53□□□□□ -0.88
FMR1-217ENST00000620828 MAP3K1Q13233 1512 aa9.53□□□□□ -0.88
FMR1-217ENST00000620828 ADAMTSL3P82987 1691 aa9.53□□□□□ -0.88
FMR1-217ENST00000620828 PHLDB1Q86UU1 1377 aa9.52□□□□□ -0.88
FMR1-217ENST00000620828 REREQ9P2R6 1566 aa9.52□□□□□ -0.88
FMR1-217ENST00000620828 CD109Q6YHK3 1445 aa9.52□□□□□ -0.89
FMR1-217ENST00000620828 ARHGEF40Q8TER5 1519 aa9.51□□□□□ -0.89
FMR1-217ENST00000620828 TROQ12816 1431 aaPredicted RBP9.5□□□□□ -0.89
FMR1-217ENST00000620828 PLCH2O75038 1416 aa9.5□□□□□ -0.89
FMR1-217ENST00000620828 ABCC1P33527 1531 aa9.49□□□□□ -0.89
FMR1-217ENST00000620828 TRHP20396 242 aaPredicted RBP9.49□□□□□ -0.89
FMR1-217ENST00000620828 TIAM1Q13009 1591 aa9.49□□□□□ -0.89
FMR1-217ENST00000620828 BCORL1Q5H9F3 1711 aa9.49□□□□□ -0.89
FMR1-217ENST00000620828 CLIP1P30622 1438 aa9.49□□□□□ -0.89
FMR1-217ENST00000620828 SAMD9LQ8IVG5 1584 aa9.49□□□□□ -0.89
FMR1-217ENST00000620828 CEP162Q5TB80 1403 aa9.48□□□□□ -0.89
FMR1-217ENST00000620828 NPM1P06748 294 aaKnown RBP eCLIP9.48□□□□□ -0.89
FMR1-217ENST00000620828 ARHGEF12Q9NZN5 1544 aa9.47□□□□□ -0.89
FMR1-217ENST00000620828 KIDINS220Q9ULH0 1771 aa9.46□□□□□ -0.89
FMR1-217ENST00000620828 INO80Q9ULG1 1556 aaPredicted RBP9.46□□□□□ -0.89
FMR1-217ENST00000620828 EHBP1L1Q8N3D4 1523 aa9.46□□□□□ -0.9
FMR1-217ENST00000620828 P3H3Q8IVL6 736 aa9.45□□□□□ -0.9
FMR1-217ENST00000620828 FAM9AQ8IZU1 332 aaPredicted RBP9.45□□□□□ -0.9
FMR1-217ENST00000620828 PLXNC1O60486 1568 aa9.45□□□□□ -0.9
FMR1-217ENST00000620828 ABCA6Q8N139 1617 aa9.45□□□□□ -0.9
FMR1-217ENST00000620828 POGZQ7Z3K3 1410 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms