RNA–Protein interactions for RNA: ENST00000619987.4

MESD-207, Transcript of mesoderm development LRP chaperone, humanhuman

TSL 1 (best)

Gene MESD, Length 3,978 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MESD-207ENST00000619987 CUX1P39880 1505 aa15.55■□□□□ 0.08
MESD-207ENST00000619987 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
MESD-207ENST00000619987 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
MESD-207ENST00000619987 RAPGEF2Q9Y4G8 1499 aa15.53■□□□□ 0.08
MESD-207ENST00000619987 NEFLP07196 543 aa15.51■□□□□ 0.07
MESD-207ENST00000619987 PLEKHD1A6NEE1 506 aa15.49■□□□□ 0.07
MESD-207ENST00000619987 LAMC3Q9Y6N6 1575 aa15.48■□□□□ 0.07
MESD-207ENST00000619987 TOP2BQ02880 1626 aa15.48■□□□□ 0.07
MESD-207ENST00000619987 TSPY4P0CV99 314 aa15.47■□□□□ 0.07
MESD-207ENST00000619987 TSPY10P0CW01 314 aa15.47■□□□□ 0.07
MESD-207ENST00000619987 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
MESD-207ENST00000619987 FGD5Q6ZNL6 1462 aa15.47■□□□□ 0.07
MESD-207ENST00000619987 RAD54L2Q9Y4B4 1467 aa15.45■□□□□ 0.06
MESD-207ENST00000619987 DDX10Q13206 875 aaKnown RBP15.44■□□□□ 0.06
MESD-207ENST00000619987 KDM2AQ9Y2K7 1162 aa15.44■□□□□ 0.06
MESD-207ENST00000619987 CFDP1Q9UEE9 299 aaPredicted RBP15.44■□□□□ 0.06
MESD-207ENST00000619987 TONSLQ96HA7 1378 aa15.44■□□□□ 0.06
MESD-207ENST00000619987 SIN3AQ96ST3 1273 aa15.43■□□□□ 0.06
MESD-207ENST00000619987 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
MESD-207ENST00000619987 VPS8Q8N3P4 1428 aa15.4■□□□□ 0.06
MESD-207ENST00000619987 URB2Q14146 1524 aaKnown RBP15.39■□□□□ 0.05
MESD-207ENST00000619987 FHOD3Q2V2M9 1422 aa15.39■□□□□ 0.05
MESD-207ENST00000619987 POLA1P09884 1462 aaPredicted RBP15.37■□□□□ 0.05
MESD-207ENST00000619987 ANP32CO43423 234 aa15.37■□□□□ 0.05
MESD-207ENST00000619987 BCANQ96GW7 911 aa15.36■□□□□ 0.05
MESD-207ENST00000619987 BIVM-ERCC5R4GMW8 1640 aa15.35■□□□□ 0.05
MESD-207ENST00000619987 RGL3Q3MIN7 710 aa15.35■□□□□ 0.05
MESD-207ENST00000619987 IGF1RP08069 1367 aa15.34■□□□□ 0.05
MESD-207ENST00000619987 DNMBPQ6XZF7 1577 aa15.33■□□□□ 0.05
MESD-207ENST00000619987 KIF21AQ7Z4S6 1674 aa15.33■□□□□ 0.04
MESD-207ENST00000619987 CCNB3Q8WWL7 1395 aa15.33■□□□□ 0.04
MESD-207ENST00000619987 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
MESD-207ENST00000619987 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
MESD-207ENST00000619987 FOXD1Q16676 465 aa15.29■□□□□ 0.04
MESD-207ENST00000619987 GTF3C3Q9Y5Q9 886 aa15.29■□□□□ 0.04
MESD-207ENST00000619987 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
MESD-207ENST00000619987 JPH4Q96JJ6 628 aa15.29■□□□□ 0.04
MESD-207ENST00000619987 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.04
MESD-207ENST00000619987 MIER1Q8N108 512 aa15.28■□□□□ 0.04
MESD-207ENST00000619987 SENP3-EIF4A1A0A087X0R7 540 aa15.27■□□□□ 0.04
MESD-207ENST00000619987 ESF1Q9H501 851 aaKnown RBP15.25■□□□□ 0.03
MESD-207ENST00000619987 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
MESD-207ENST00000619987 SALL2Q9Y467 1007 aaPredicted RBP15.2■□□□□ 0.02
MESD-207ENST00000619987 ABCA10Q8WWZ4 1543 aa15.2■□□□□ 0.02
MESD-207ENST00000619987 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
MESD-207ENST00000619987 PRXQ9BXM0 1461 aa15.2■□□□□ 0.02
MESD-207ENST00000619987 FAM9BQ8IZU0 186 aa15.17■□□□□ 0.02
MESD-207ENST00000619987 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
MESD-207ENST00000619987 FMN1Q68DA7 1419 aa15.14■□□□□ 0.01
MESD-207ENST00000619987 KIF21BO75037 1637 aa15.13■□□□□ 0.01
MESD-207ENST00000619987 HNRNPMP52272 730 aaKnown RBP eCLIP15.13■□□□□ 0.013e-8■■■□□ 15.7
MESD-207ENST00000619987 CARMIL2Q6F5E8 1435 aa15.12■□□□□ 0.01
MESD-207ENST00000619987 ARHGAP35Q9NRY4 1499 aa15.12■□□□□ 0.01
MESD-207ENST00000619987 RAB3GAP2Q9H2M9 1393 aa15.12■□□□□ 0.01
MESD-207ENST00000619987 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
MESD-207ENST00000619987 MLECQ14165 292 aa15.1■□□□□ 0.01
MESD-207ENST00000619987 EIF4G2P78344 907 aaKnown RBP eCLIP15.1■□□□□ 0.01
MESD-207ENST00000619987 HNRNPUQ00839 825 aaKnown RBP eCLIP15.1■□□□□ 0.01
MESD-207ENST00000619987 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
MESD-207ENST00000619987 WDR62O43379 1518 aa15.08■□□□□ 0
MESD-207ENST00000619987 ARID4BQ4LE39 1312 aaPredicted RBP15.08■□□□□ 0
MESD-207ENST00000619987 ERICH6Q7L0X2 663 aa15.08■□□□□ 0
MESD-207ENST00000619987 ZNF644Q9H582 1327 aaPredicted RBP15.07■□□□□ 0
MESD-207ENST00000619987 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
MESD-207ENST00000619987 SETD5Q9C0A6 1442 aa15.06■□□□□ 0
MESD-207ENST00000619987 GGT6Q6P531 493 aa15.06■□□□□ 0
MESD-207ENST00000619987 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
MESD-207ENST00000619987 PLEKHG5O94827 1062 aa15.05■□□□□ -0
MESD-207ENST00000619987 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
MESD-207ENST00000619987 PKD2Q13563 968 aa15.05■□□□□ -0
MESD-207ENST00000619987 ARAP1Q96P48 1450 aa15.04■□□□□ -0
MESD-207ENST00000619987 BCL11AQ9H165 835 aa15.04■□□□□ -0
MESD-207ENST00000619987 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
MESD-207ENST00000619987 DCAF11Q8TEB1 546 aa15.03■□□□□ -0
MESD-207ENST00000619987 GRIN2BQ13224 1484 aa15.03■□□□□ -0
MESD-207ENST00000619987 MRS2Q9HD23 443 aa15.01□□□□□ -0.01
MESD-207ENST00000619987 CARD11Q9BXL7 1154 aa15.01□□□□□ -0.01
MESD-207ENST00000619987 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
MESD-207ENST00000619987 PTPRGP23470 1445 aa15□□□□□ -0.01
MESD-207ENST00000619987 SLC24A1O60721 1099 aa15□□□□□ -0.01
MESD-207ENST00000619987 MPHOSPH9Q99550 1183 aa15□□□□□ -0.01
MESD-207ENST00000619987 SNAPC4Q5SXM2 1469 aa14.99□□□□□ -0.01
MESD-207ENST00000619987 TMC1Q8TDI8 760 aa14.98□□□□□ -0.01
MESD-207ENST00000619987 PHLDB1Q86UU1 1377 aa14.97□□□□□ -0.01
MESD-207ENST00000619987 ABCA5Q8WWZ7 1642 aa14.96□□□□□ -0.01
MESD-207ENST00000619987 EFCAB2Q5VUJ9 269 aa14.96□□□□□ -0.01
MESD-207ENST00000619987 NUP155O75694 1391 aa14.96□□□□□ -0.01
MESD-207ENST00000619987 IRX6P78412 446 aaPredicted RBP14.96□□□□□ -0.02
MESD-207ENST00000619987 PPP1R15AO75807 674 aaPredicted RBP14.94□□□□□ -0.02
MESD-207ENST00000619987 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
MESD-207ENST00000619987 FKBP8Q14318 412 aa14.93□□□□□ -0.02
MESD-207ENST00000619987 KIF3BO15066 747 aa14.93□□□□□ -0.02
MESD-207ENST00000619987 WDR97A6NE52 1622 aa14.92□□□□□ -0.02
MESD-207ENST00000619987 SAFB2Q14151 953 aaKnown RBP eCLIP14.92□□□□□ -0.02
MESD-207ENST00000619987 EIF4G3O43432 1585 aaKnown RBP14.91□□□□□ -0.02
MESD-207ENST00000619987 L3MBTL2Q969R5 705 aa14.91□□□□□ -0.02
MESD-207ENST00000619987 CUL7Q14999 1698 aa14.91□□□□□ -0.02
MESD-207ENST00000619987 NUTM2DQ5VT03 806 aaPredicted RBP14.89□□□□□ -0.03
MESD-207ENST00000619987 CLSPNQ9HAW4 1339 aa14.89□□□□□ -0.03
MESD-207ENST00000619987 DHX57Q6P158 1386 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms