RNA–Protein interactions for RNA: ENST00000619987.4

MESD-207, Transcript of mesoderm development LRP chaperone, humanhuman

TSL 1 (best)

Gene MESD, Length 3,978 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MESD-207ENST00000619987 NISCHQ9Y2I1 1504 aa21.47■■□□□ 1.03
MESD-207ENST00000619987 DCAF8L2P0C7V8 631 aa20.33■□□□□ 0.84
MESD-207ENST00000619987 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
MESD-207ENST00000619987 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
MESD-207ENST00000619987 EHMT2Q96KQ7 1210 aa18.46■□□□□ 0.55
MESD-207ENST00000619987 CCDC180Q9P1Z9 1646 aa18.42■□□□□ 0.54
MESD-207ENST00000619987 FAM9AQ8IZU1 332 aaPredicted RBP18.07■□□□□ 0.48
MESD-207ENST00000619987 ABCC9O60706 1549 aa18.06■□□□□ 0.48
MESD-207ENST00000619987 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
MESD-207ENST00000619987 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.432e-7■■■□□ 18
MESD-207ENST00000619987 TTBK1Q5TCY1 1321 aaPredicted RBP17.68■□□□□ 0.42
MESD-207ENST00000619987 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
MESD-207ENST00000619987 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
MESD-207ENST00000619987 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
MESD-207ENST00000619987 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
MESD-207ENST00000619987 CHIC1Q5VXU3 224 aa17.42■□□□□ 0.38
MESD-207ENST00000619987 LOC105371045A0A1W2PR82 267 aa17.39■□□□□ 0.38
MESD-207ENST00000619987 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
MESD-207ENST00000619987 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
MESD-207ENST00000619987 NACADO15069 1562 aa17.34■□□□□ 0.37
MESD-207ENST00000619987 UBTFP17480 764 aaKnown RBP17.3■□□□□ 0.36
MESD-207ENST00000619987 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
MESD-207ENST00000619987 MYO15BQ96JP2 1530 aa17.25■□□□□ 0.35
MESD-207ENST00000619987 APLP2Q06481 763 aa17.24■□□□□ 0.35
MESD-207ENST00000619987 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
MESD-207ENST00000619987 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
MESD-207ENST00000619987 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
MESD-207ENST00000619987 RSF1Q96T23 1441 aaPredicted RBP16.77■□□□□ 0.27
MESD-207ENST00000619987 ITGAEP38570 1179 aa16.74■□□□□ 0.27
MESD-207ENST00000619987 UNC13AQ9UPW8 1703 aa16.74■□□□□ 0.27
MESD-207ENST00000619987 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
MESD-207ENST00000619987 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
MESD-207ENST00000619987 TRIM26Q12899 539 aaPredicted RBP16.66■□□□□ 0.26
MESD-207ENST00000619987 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
MESD-207ENST00000619987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
MESD-207ENST00000619987 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
MESD-207ENST00000619987 FBLN2P98095 1184 aa16.51■□□□□ 0.23
MESD-207ENST00000619987 P3H3Q8IVL6 736 aa16.51■□□□□ 0.23
MESD-207ENST00000619987 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
MESD-207ENST00000619987 WIZO95785 1651 aa16.51■□□□□ 0.23
MESD-207ENST00000619987 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
MESD-207ENST00000619987 ARID3CA6NKF2 412 aa16.44■□□□□ 0.22
MESD-207ENST00000619987 HRCP23327 699 aa16.4■□□□□ 0.22
MESD-207ENST00000619987 ZEB1P37275 1124 aaPredicted RBP16.36■□□□□ 0.21
MESD-207ENST00000619987 ATAD2BQ9ULI0 1458 aa16.31■□□□□ 0.2
MESD-207ENST00000619987 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
MESD-207ENST00000619987 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
MESD-207ENST00000619987 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
MESD-207ENST00000619987 MYT1LQ9UL68 1186 aa16.26■□□□□ 0.19
MESD-207ENST00000619987 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
MESD-207ENST00000619987 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
MESD-207ENST00000619987 TOP2AP11388 1531 aaKnown RBP16.22■□□□□ 0.19
MESD-207ENST00000619987 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
MESD-207ENST00000619987 CNGB1Q14028 1251 aaPredicted RBP16.14■□□□□ 0.17
MESD-207ENST00000619987 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
MESD-207ENST00000619987 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.17
MESD-207ENST00000619987 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
MESD-207ENST00000619987 CC2D2AQ9P2K1 1620 aa16.09■□□□□ 0.17
MESD-207ENST00000619987 PEG3Q9GZU2 1588 aa16.08■□□□□ 0.16
MESD-207ENST00000619987 POLR3GLQ9BT43 218 aa16.07■□□□□ 0.16
MESD-207ENST00000619987 NEUROD1Q13562 356 aa16.06■□□□□ 0.16
MESD-207ENST00000619987 TRIM52Q96A61 297 aa16.02■□□□□ 0.16
MESD-207ENST00000619987 SOGA1O94964 1423 aa16.02■□□□□ 0.15
MESD-207ENST00000619987 ABCC8Q09428 1581 aa16.01■□□□□ 0.15
MESD-207ENST00000619987 ZNF777Q9ULD5 760 aaPredicted RBP15.98■□□□□ 0.15
MESD-207ENST00000619987 HMGXB3Q12766 1538 aa15.94■□□□□ 0.14
MESD-207ENST00000619987 CLIP1P30622 1438 aa15.91■□□□□ 0.14
MESD-207ENST00000619987 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
MESD-207ENST00000619987 CEP162Q5TB80 1403 aa15.89■□□□□ 0.13
MESD-207ENST00000619987 CENPBP07199 599 aaPredicted RBP15.89■□□□□ 0.13
MESD-207ENST00000619987 ZNF326Q5BKZ1 582 aaKnown RBP15.86■□□□□ 0.13
MESD-207ENST00000619987 CHIC2Q9UKJ5 165 aa15.86■□□□□ 0.13
MESD-207ENST00000619987 CADPSQ9ULU8 1353 aa15.84■□□□□ 0.13
MESD-207ENST00000619987 DIEXFQ68CQ4 756 aaKnown RBP15.83■□□□□ 0.12
MESD-207ENST00000619987 KIF27Q86VH2 1401 aa15.8■□□□□ 0.12
MESD-207ENST00000619987 GOLGA3Q08378 1498 aa15.79■□□□□ 0.12
MESD-207ENST00000619987 NESP48681 1621 aa15.78■□□□□ 0.12
MESD-207ENST00000619987 CUX2O14529 1486 aa15.77■□□□□ 0.11
MESD-207ENST00000619987 TDRD9Q8NDG6 1382 aaKnown RBP15.77■□□□□ 0.11
MESD-207ENST00000619987 CFTRP13569 1480 aa15.76■□□□□ 0.11
MESD-207ENST00000619987 ERCC6Q03468 1493 aa15.75■□□□□ 0.11
MESD-207ENST00000619987 RUSC2Q8N2Y8 1516 aa15.74■□□□□ 0.11
MESD-207ENST00000619987 EEA1Q15075 1411 aa15.73■□□□□ 0.11
MESD-207ENST00000619987 TNIKQ9UKE5 1360 aa15.72■□□□□ 0.11
MESD-207ENST00000619987 CDK11AQ9UQ88 783 aaPredicted RBP15.72■□□□□ 0.11
MESD-207ENST00000619987 MTUS2Q5JR59 1369 aa15.7■□□□□ 0.1
MESD-207ENST00000619987 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
MESD-207ENST00000619987 CARMIL1Q5VZK9 1371 aa15.68■□□□□ 0.1
MESD-207ENST00000619987 KCNH8Q96L42 1107 aa15.68■□□□□ 0.1
MESD-207ENST00000619987 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
MESD-207ENST00000619987 SLC4A1APQ9BWU0 796 aaKnown RBP15.64■□□□□ 0.09
MESD-207ENST00000619987 RRP7BPQ9NSQ0 103 aa15.64■□□□□ 0.09
MESD-207ENST00000619987 SYNJ1O43426 1573 aa15.64■□□□□ 0.09
MESD-207ENST00000619987 HIRIP3Q9BW71 556 aaPredicted RBP15.61■□□□□ 0.09
MESD-207ENST00000619987 KANK4Q5T7N3 995 aaPredicted RBP15.6■□□□□ 0.09
MESD-207ENST00000619987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.6■□□□□ 0.093e-10■■■□□ 15.9
MESD-207ENST00000619987 ZNF316A6NFI3 1004 aaPredicted RBP15.59■□□□□ 0.09
MESD-207ENST00000619987 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
MESD-207ENST00000619987 PDS5BQ9NTI5 1447 aa15.58■□□□□ 0.08
MESD-207ENST00000619987 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms