RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 IGF1RP08069 1367 aa19.52■□□□□ 0.72
TARDBP-221ENST00000619555 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
TARDBP-221ENST00000619555 RUSC2Q8N2Y8 1516 aa19.49■□□□□ 0.71
TARDBP-221ENST00000619555 KIAA0586Q9BVV6 1533 aa19.41■□□□□ 0.7
TARDBP-221ENST00000619555 CUL7Q14999 1698 aa19.41■□□□□ 0.7
TARDBP-221ENST00000619555 CARMIL1Q5VZK9 1371 aa19.38■□□□□ 0.69
TARDBP-221ENST00000619555 KIF13AQ9H1H9 1805 aa19.35■□□□□ 0.69
TARDBP-221ENST00000619555 NPM1P06748 294 aaKnown RBP eCLIP19.34■□□□□ 0.69
TARDBP-221ENST00000619555 ADCY10Q96PN6 1610 aa19.31■□□□□ 0.68
TARDBP-221ENST00000619555 FAM69CQ0P6D2 419 aa19.29■□□□□ 0.68
TARDBP-221ENST00000619555 TTBK1Q5TCY1 1321 aaPredicted RBP19.27■□□□□ 0.68
TARDBP-221ENST00000619555 ABCC10Q5T3U5 1492 aa19.27■□□□□ 0.67
TARDBP-221ENST00000619555 PTPRGP23470 1445 aa19.25■□□□□ 0.67
TARDBP-221ENST00000619555 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
TARDBP-221ENST00000619555 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
TARDBP-221ENST00000619555 IQGAP2Q13576 1575 aa19.21■□□□□ 0.67
TARDBP-221ENST00000619555 CARMIL2Q6F5E8 1435 aa19.21■□□□□ 0.67
TARDBP-221ENST00000619555 DIP2BQ9P265 1576 aa19.2■□□□□ 0.66
TARDBP-221ENST00000619555 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
TARDBP-221ENST00000619555 DISP1Q96F81 1524 aa19.15■□□□□ 0.66
TARDBP-221ENST00000619555 TSPOAP1O95153 1857 aa19.12■□□□□ 0.65
TARDBP-221ENST00000619555 ABCC2Q92887 1545 aa19.12■□□□□ 0.65
TARDBP-221ENST00000619555 UACAQ9BZF9 1416 aa19.1■□□□□ 0.65
TARDBP-221ENST00000619555 UGGT2Q9NYU1 1516 aa19.1■□□□□ 0.65
TARDBP-221ENST00000619555 UHRF1BP1LA0JNW5 1464 aa19.09■□□□□ 0.65
TARDBP-221ENST00000619555 ASXL2Q76L83 1435 aa19.08■□□□□ 0.64
TARDBP-221ENST00000619555 PLB1Q6P1J6 1458 aa19.04■□□□□ 0.64
TARDBP-221ENST00000619555 KIAA0556O60303 1618 aa19.04■□□□□ 0.64
TARDBP-221ENST00000619555 KDM6BO15054 1643 aa19.03■□□□□ 0.64
TARDBP-221ENST00000619555 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
TARDBP-221ENST00000619555 CTTNBP2Q8WZ74 1663 aa19■□□□□ 0.63
TARDBP-221ENST00000619555 GLI2P10070 1586 aa18.99■□□□□ 0.63
TARDBP-221ENST00000619555 PRXQ9BXM0 1461 aa18.99■□□□□ 0.63
TARDBP-221ENST00000619555 ZCCHC11Q5TAX3 1644 aaKnown RBP18.96■□□□□ 0.63
TARDBP-221ENST00000619555 PPRC1Q5VV67 1664 aaKnown RBP18.96■□□□□ 0.63
TARDBP-221ENST00000619555 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
TARDBP-221ENST00000619555 GOLGA3Q08378 1498 aa18.94■□□□□ 0.62
TARDBP-221ENST00000619555 KDM4FA0A1W2PPD8 638 aa18.9■□□□□ 0.62
TARDBP-221ENST00000619555 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.61
TARDBP-221ENST00000619555 MAP3K4Q9Y6R4 1608 aa18.89■□□□□ 0.61
TARDBP-221ENST00000619555 ABCA8O94911 1581 aa18.88■□□□□ 0.61
TARDBP-221ENST00000619555 P3H3Q8IVL6 736 aa18.87■□□□□ 0.61
TARDBP-221ENST00000619555 COL17A1Q9UMD9 1497 aaPredicted RBP18.87■□□□□ 0.61
TARDBP-221ENST00000619555 WDR7Q9Y4E6 1490 aa18.87■□□□□ 0.61
TARDBP-221ENST00000619555 KCNH8Q96L42 1107 aa18.85■□□□□ 0.61
TARDBP-221ENST00000619555 TEX14Q8IWB6 1497 aa18.83■□□□□ 0.6
TARDBP-221ENST00000619555 ARID3CA6NKF2 412 aa18.82■□□□□ 0.6
TARDBP-221ENST00000619555 CD109Q6YHK3 1445 aa18.78■□□□□ 0.6
TARDBP-221ENST00000619555 FAM9AQ8IZU1 332 aaPredicted RBP18.77■□□□□ 0.6
TARDBP-221ENST00000619555 RANGAP1P46060 587 aaPredicted RBP18.75■□□□□ 0.59
TARDBP-221ENST00000619555 ATP10BO94823 1461 aa18.75■□□□□ 0.59
TARDBP-221ENST00000619555 EEA1Q15075 1411 aa18.74■□□□□ 0.59
TARDBP-221ENST00000619555 CFAP43Q8NDM7 1665 aa18.74■□□□□ 0.59
TARDBP-221ENST00000619555 SAMD9Q5K651 1589 aa18.74■□□□□ 0.59
TARDBP-221ENST00000619555 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
TARDBP-221ENST00000619555 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
TARDBP-221ENST00000619555 RAPGEF6Q8TEU7 1601 aa18.67■□□□□ 0.58
TARDBP-221ENST00000619555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
TARDBP-221ENST00000619555 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
TARDBP-221ENST00000619555 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
TARDBP-221ENST00000619555 NUP153P49790 1475 aaKnown RBP18.62■□□□□ 0.57
TARDBP-221ENST00000619555 ABCA9Q8IUA7 1624 aa18.61■□□□□ 0.57
TARDBP-221ENST00000619555 KIF21BO75037 1637 aa18.6■□□□□ 0.57
TARDBP-221ENST00000619555 EHMT2Q96KQ7 1210 aa18.6■□□□□ 0.57
TARDBP-221ENST00000619555 ARAP3Q8WWN8 1544 aa18.59■□□□□ 0.57
TARDBP-221ENST00000619555 PLEKHD1A6NEE1 506 aa18.55■□□□□ 0.56
TARDBP-221ENST00000619555 RAPGEF3O95398 923 aa18.55■□□□□ 0.56
TARDBP-221ENST00000619555 PHLDB1Q86UU1 1377 aa18.55■□□□□ 0.56
TARDBP-221ENST00000619555 EFCAB5A4FU69 1503 aa18.54■□□□□ 0.56
TARDBP-221ENST00000619555 UBTFP17480 764 aaKnown RBP18.53■□□□□ 0.56
TARDBP-221ENST00000619555 NEO1Q92859 1461 aa18.52■□□□□ 0.55
TARDBP-221ENST00000619555 CDK13Q14004 1512 aaKnown RBP18.45■□□□□ 0.54
TARDBP-221ENST00000619555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.44■□□□□ 0.54
TARDBP-221ENST00000619555 FRMPD1Q5SYB0 1578 aa18.44■□□□□ 0.54
TARDBP-221ENST00000619555 HECW2Q9P2P5 1572 aa18.44■□□□□ 0.54
TARDBP-221ENST00000619555 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
TARDBP-221ENST00000619555 AKNAQ7Z591 1439 aa18.42■□□□□ 0.54
TARDBP-221ENST00000619555 ARHGAP35Q9NRY4 1499 aa18.42■□□□□ 0.54
TARDBP-221ENST00000619555 TTC37Q6PGP7 1564 aa18.42■□□□□ 0.54
TARDBP-221ENST00000619555 FANCAO15360 1455 aa18.4■□□□□ 0.54
TARDBP-221ENST00000619555 DENND4BO75064 1496 aaPredicted RBP18.4■□□□□ 0.54
TARDBP-221ENST00000619555 ARID4BQ4LE39 1312 aaPredicted RBP18.39■□□□□ 0.53
TARDBP-221ENST00000619555 FMN1Q68DA7 1419 aa18.39■□□□□ 0.53
TARDBP-221ENST00000619555 ADAMTSL3P82987 1691 aa18.38■□□□□ 0.53
TARDBP-221ENST00000619555 RICTORQ6R327 1708 aa18.37■□□□□ 0.53
TARDBP-221ENST00000619555 HECW1Q76N89 1606 aa18.35■□□□□ 0.53
TARDBP-221ENST00000619555 CFAP74Q9C0B2 1584 aa18.35■□□□□ 0.53
TARDBP-221ENST00000619555 PTPRMP28827 1452 aa18.34■□□□□ 0.53
TARDBP-221ENST00000619555 PLCH2O75038 1416 aa18.33■□□□□ 0.53
TARDBP-221ENST00000619555 BCORL1Q5H9F3 1711 aa18.33■□□□□ 0.52
TARDBP-221ENST00000619555 ARHGEF40Q8TER5 1519 aa18.33■□□□□ 0.52
TARDBP-221ENST00000619555 ILDR1Q86SU0 546 aaPredicted RBP18.32■□□□□ 0.52
TARDBP-221ENST00000619555 CDK11AQ9UQ88 783 aaPredicted RBP18.32■□□□□ 0.52
TARDBP-221ENST00000619555 SCAPERQ9BY12 1400 aa18.31■□□□□ 0.52
TARDBP-221ENST00000619555 YEATS2Q9ULM3 1422 aa18.3■□□□□ 0.52
TARDBP-221ENST00000619555 MADDQ8WXG6 1647 aa18.3■□□□□ 0.52
TARDBP-221ENST00000619555 EFCAB2Q5VUJ9 269 aa18.29■□□□□ 0.52
TARDBP-221ENST00000619555 ZMYM4Q5VZL5 1548 aa18.28■□□□□ 0.52
TARDBP-221ENST00000619555 KIF14Q15058 1648 aa18.28■□□□□ 0.52
TARDBP-221ENST00000619555 ZFYVE16Q7Z3T8 1539 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms