RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 RIMBP3BA6NNM3 1639 aa30.3■■■□□ 2.44
MALAT1-215ENST00000619449 SHROOM2Q13796 1616 aa30.3■■■□□ 2.44
MALAT1-215ENST00000619449 RIMBP3Q9UFD9 1639 aa30.3■■■□□ 2.44
MALAT1-215ENST00000619449 KIAA0586Q9BVV6 1533 aa30.3■■■□□ 2.44
MALAT1-215ENST00000619449 FAM9AQ8IZU1 332 aaPredicted RBP30.25■■■□□ 2.43
MALAT1-215ENST00000619449 JPH4Q96JJ6 628 aa30.19■■■□□ 2.42
MALAT1-215ENST00000619449 ERCC6L2Q5T890 1561 aa30.16■■■□□ 2.42
MALAT1-215ENST00000619449 KIF21BO75037 1637 aa30.16■■■□□ 2.42
MALAT1-215ENST00000619449 IQGAP2Q13576 1575 aa30.13■■■□□ 2.41
MALAT1-215ENST00000619449 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
MALAT1-215ENST00000619449 PRG4Q92954 1404 aaPredicted RBP30.11■■■□□ 2.41
MALAT1-215ENST00000619449 CTTNBP2Q8WZ74 1663 aa30.09■■■□□ 2.41
MALAT1-215ENST00000619449 UGGT2Q9NYU1 1516 aa30.03■■■□□ 2.4
MALAT1-215ENST00000619449 CYB5RLQ6IPT4 315 aa29.97■■■□□ 2.39
MALAT1-215ENST00000619449 DISP1Q96F81 1524 aa29.96■■■□□ 2.39
MALAT1-215ENST00000619449 GOLGA3Q08378 1498 aa29.96■■■□□ 2.39
MALAT1-215ENST00000619449 CARMIL2Q6F5E8 1435 aa29.89■■■□□ 2.38
MALAT1-215ENST00000619449 KIAA0556O60303 1618 aa29.86■■■□□ 2.37
MALAT1-215ENST00000619449 TNIKQ9UKE5 1360 aa29.82■■■□□ 2.36
MALAT1-215ENST00000619449 SAMD9Q5K651 1589 aa29.78■■■□□ 2.36
MALAT1-215ENST00000619449 EHMT2Q96KQ7 1210 aa29.78■■■□□ 2.36
MALAT1-215ENST00000619449 UBTFP17480 764 aaKnown RBP29.77■■■□□ 2.36
MALAT1-215ENST00000619449 PTPRGP23470 1445 aa29.77■■■□□ 2.36
MALAT1-215ENST00000619449 ADCY10Q96PN6 1610 aa29.65■■■□□ 2.34
MALAT1-215ENST00000619449 EFCAB5A4FU69 1503 aa29.65■■■□□ 2.34
MALAT1-215ENST00000619449 UHRF1BP1LA0JNW5 1464 aa29.61■■■□□ 2.33
MALAT1-215ENST00000619449 P3H3Q8IVL6 736 aa29.6■■■□□ 2.33
MALAT1-215ENST00000619449 UACAQ9BZF9 1416 aa29.59■■■□□ 2.33
MALAT1-215ENST00000619449 RANGAP1P46060 587 aaPredicted RBP29.58■■■□□ 2.33
MALAT1-215ENST00000619449 TTBK1Q5TCY1 1321 aaPredicted RBP29.58■■■□□ 2.33
MALAT1-215ENST00000619449 ARHGAP35Q9NRY4 1499 aa29.58■■■□□ 2.33
MALAT1-215ENST00000619449 FHOD3Q2V2M9 1422 aa29.56■■■□□ 2.32
MALAT1-215ENST00000619449 ABCA8O94911 1581 aa29.56■■■□□ 2.32
MALAT1-215ENST00000619449 ABCC2Q92887 1545 aa29.55■■■□□ 2.32
MALAT1-215ENST00000619449 PLB1Q6P1J6 1458 aa29.55■■■□□ 2.32
MALAT1-215ENST00000619449 LOC105371045A0A1W2PR82 267 aa29.52■■■□□ 2.32
MALAT1-215ENST00000619449 KDM5BQ9UGL1 1544 aa29.46■■■□□ 2.31
MALAT1-215ENST00000619449 MAPKBP1O60336 1514 aa29.42■■■□□ 2.3
MALAT1-215ENST00000619449 CLIP1P30622 1438 aa29.42■■■□□ 2.3
MALAT1-215ENST00000619449 RAPGEF6Q8TEU7 1601 aa29.39■■■□□ 2.3
MALAT1-215ENST00000619449 NPM1P06748 294 aaKnown RBP eCLIP29.39■■■□□ 2.3
MALAT1-215ENST00000619449 CEP162Q5TB80 1403 aa29.37■■■□□ 2.29
MALAT1-215ENST00000619449 ZCCHC11Q5TAX3 1644 aaKnown RBP29.35■■■□□ 2.29
MALAT1-215ENST00000619449 FMN1Q68DA7 1419 aa29.35■■■□□ 2.29
MALAT1-215ENST00000619449 NUP153P49790 1475 aaKnown RBP29.33■■■□□ 2.29
MALAT1-215ENST00000619449 ATP10BO94823 1461 aa29.3■■■□□ 2.28
MALAT1-215ENST00000619449 ASXL2Q76L83 1435 aa29.28■■■□□ 2.28
MALAT1-215ENST00000619449 ABCC10Q5T3U5 1492 aa29.24■■■□□ 2.27
MALAT1-215ENST00000619449 DIP2BQ9P265 1576 aa29.21■■■□□ 2.27
MALAT1-215ENST00000619449 KIF13AQ9H1H9 1805 aa29.2■■■□□ 2.27
MALAT1-215ENST00000619449 TRHP20396 242 aaPredicted RBP29.2■■■□□ 2.26
MALAT1-215ENST00000619449 CASKIN1Q8WXD9 1431 aa29.19■■■□□ 2.26
MALAT1-215ENST00000619449 HECW1Q76N89 1606 aa29.17■■■□□ 2.26
MALAT1-215ENST00000619449 PCF11O94913 1555 aaKnown RBP29.17■■■□□ 2.26
MALAT1-215ENST00000619449 WDR7Q9Y4E6 1490 aa29.17■■■□□ 2.26
MALAT1-215ENST00000619449 ARID3CA6NKF2 412 aa29.16■■■□□ 2.26
MALAT1-215ENST00000619449 EPRSP07814 1512 aaKnown RBP29.14■■■□□ 2.25
MALAT1-215ENST00000619449 GLI2P10070 1586 aa29.12■■■□□ 2.25
MALAT1-215ENST00000619449 LRRIQ1Q96JM4 1722 aa29.11■■■□□ 2.25
MALAT1-215ENST00000619449 FYCO1Q9BQS8 1478 aa29.11■■■□□ 2.25
MALAT1-215ENST00000619449 CDK13Q14004 1512 aaKnown RBP29.11■■■□□ 2.25
MALAT1-215ENST00000619449 FAM69CQ0P6D2 419 aa29.1■■■□□ 2.25
MALAT1-215ENST00000619449 ATP1B4Q9UN42 357 aaPredicted RBP29.02■■■□□ 2.24
MALAT1-215ENST00000619449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.01■■■□□ 2.23
MALAT1-215ENST00000619449 HNRNPUL2Q1KMD3 747 aaKnown RBP29.01■■■□□ 2.23
MALAT1-215ENST00000619449 CCDC18Q5T9S5 1454 aa29.01■■■□□ 2.23
MALAT1-215ENST00000619449 VPS8Q8N3P4 1428 aa29.01■■■□□ 2.23
MALAT1-215ENST00000619449 MAP3K4Q9Y6R4 1608 aa28.98■■■□□ 2.23
MALAT1-215ENST00000619449 PLEKHD1A6NEE1 506 aa28.97■■■□□ 2.23
MALAT1-215ENST00000619449 KCNH8Q96L42 1107 aa28.96■■■□□ 2.23
MALAT1-215ENST00000619449 PPRC1Q5VV67 1664 aaKnown RBP28.93■■■□□ 2.22
MALAT1-215ENST00000619449 ABCA9Q8IUA7 1624 aa28.92■■■□□ 2.22
MALAT1-215ENST00000619449 CFAP43Q8NDM7 1665 aa28.91■■■□□ 2.22
MALAT1-215ENST00000619449 MAGI3Q5TCQ9 1506 aa28.9■■■□□ 2.22
MALAT1-215ENST00000619449 TROQ12816 1431 aaPredicted RBP28.89■■■□□ 2.22
MALAT1-215ENST00000619449 CDK11AQ9UQ88 783 aaPredicted RBP28.89■■■□□ 2.22
MALAT1-215ENST00000619449 CD109Q6YHK3 1445 aa28.86■■■□□ 2.21
MALAT1-215ENST00000619449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.85■■■□□ 2.21
MALAT1-215ENST00000619449 TSPOAP1O95153 1857 aa28.85■■■□□ 2.21
MALAT1-215ENST00000619449 KIF14Q15058 1648 aa28.8■■■□□ 2.2
MALAT1-215ENST00000619449 TTC37Q6PGP7 1564 aa28.79■■■□□ 2.2
MALAT1-215ENST00000619449 MAP3K1Q13233 1512 aa28.78■■■□□ 2.2
MALAT1-215ENST00000619449 TIAM1Q13009 1591 aa28.77■■■□□ 2.2
MALAT1-215ENST00000619449 TEX14Q8IWB6 1497 aa28.76■■■□□ 2.19
MALAT1-215ENST00000619449 EHBP1L1Q8N3D4 1523 aa28.69■■■□□ 2.18
MALAT1-215ENST00000619449 MTUS2Q5JR59 1369 aa28.69■■■□□ 2.18
MALAT1-215ENST00000619449 PLCH2O75038 1416 aa28.69■■■□□ 2.18
MALAT1-215ENST00000619449 ARAP3Q8WWN8 1544 aa28.66■■■□□ 2.18
MALAT1-215ENST00000619449 LRRC9Q6ZRR7 1453 aa28.66■■■□□ 2.18
MALAT1-215ENST00000619449 COL17A1Q9UMD9 1497 aaPredicted RBP28.66■■■□□ 2.18
MALAT1-215ENST00000619449 NEO1Q92859 1461 aa28.64■■■□□ 2.17
MALAT1-215ENST00000619449 MYO5CQ9NQX4 1742 aa28.63■■■□□ 2.17
MALAT1-215ENST00000619449 PHLDB1Q86UU1 1377 aa28.62■■■□□ 2.17
MALAT1-215ENST00000619449 KANK4Q5T7N3 995 aaPredicted RBP28.61■■■□□ 2.17
MALAT1-215ENST00000619449 KDM6BO15054 1643 aa28.61■■■□□ 2.17
MALAT1-215ENST00000619449 FANCAO15360 1455 aa28.59■■■□□ 2.17
MALAT1-215ENST00000619449 PREX2Q70Z35 1606 aa28.58■■■□□ 2.17
MALAT1-215ENST00000619449 CDC42BPAQ5VT25 1732 aa28.57■■■□□ 2.16
MALAT1-215ENST00000619449 CDC42BPBQ9Y5S2 1711 aa28.57■■■□□ 2.16
MALAT1-215ENST00000619449 GPATCH8Q9UKJ3 1502 aaKnown RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms