RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 ERICH6Q7L0X2 663 aa21.21■□□□□ 0.99
SRRT-217ENST00000618411 CDK11AQ9UQ88 783 aaPredicted RBP21.19■□□□□ 0.98
SRRT-217ENST00000618411 SETD5Q9C0A6 1442 aa21.17■□□□□ 0.98
SRRT-217ENST00000618411 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
SRRT-217ENST00000618411 SIN3AQ96ST3 1273 aa21.1■□□□□ 0.97
SRRT-217ENST00000618411 ERICH6BQ5W0A0 696 aa21.09■□□□□ 0.97
SRRT-217ENST00000618411 ARHGAP35Q9NRY4 1499 aa21.06■□□□□ 0.96
SRRT-217ENST00000618411 MAP3K1Q13233 1512 aa21.06■□□□□ 0.96
SRRT-217ENST00000618411 DEKP35659 375 aaKnown RBP21■□□□□ 0.95
SRRT-217ENST00000618411 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
SRRT-217ENST00000618411 PRKCSHP14314 528 aaPredicted RBP20.99■□□□□ 0.95
SRRT-217ENST00000618411 HIRIP3Q9BW71 556 aaPredicted RBP20.99■□□□□ 0.95
SRRT-217ENST00000618411 TIAM1Q13009 1591 aa20.98■□□□□ 0.95
SRRT-217ENST00000618411 PPP4R2Q9NY27 417 aa20.96■□□□□ 0.95
SRRT-217ENST00000618411 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
SRRT-217ENST00000618411 HNRNPUQ00839 825 aaKnown RBP eCLIP20.95■□□□□ 0.94
SRRT-217ENST00000618411 IRX6P78412 446 aaPredicted RBP20.92■□□□□ 0.94
SRRT-217ENST00000618411 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
SRRT-217ENST00000618411 LRRC9Q6ZRR7 1453 aa20.91■□□□□ 0.94
SRRT-217ENST00000618411 PHLDB1Q86UU1 1377 aa20.9■□□□□ 0.94
SRRT-217ENST00000618411 FAM50AQ14320 339 aaKnown RBP20.87■□□□□ 0.93
SRRT-217ENST00000618411 TONSLQ96HA7 1378 aa20.85■□□□□ 0.93
SRRT-217ENST00000618411 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.931e-6■■■■□ 20.3
SRRT-217ENST00000618411 NOP58Q9Y2X3 529 aaKnown RBP20.83■□□□□ 0.92
SRRT-217ENST00000618411 CUX1P39880 1505 aa20.81■□□□□ 0.92
SRRT-217ENST00000618411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.81■□□□□ 0.92
SRRT-217ENST00000618411 FHAD1B1AJZ9 1412 aa20.79■□□□□ 0.92
SRRT-217ENST00000618411 CFAP43Q8NDM7 1665 aa20.75■□□□□ 0.91
SRRT-217ENST00000618411 B4GALNT3Q6L9W6 998 aa20.73■□□□□ 0.91
SRRT-217ENST00000618411 NBR1Q14596 966 aa20.7■□□□□ 0.9
SRRT-217ENST00000618411 PAK3O75914 559 aaPredicted RBP20.69■□□□□ 0.9
SRRT-217ENST00000618411 UACAQ9BZF9 1416 aa20.69■□□□□ 0.9
SRRT-217ENST00000618411 ZBED9Q6R2W3 1325 aa20.67■□□□□ 0.9
SRRT-217ENST00000618411 WASHC2AQ641Q2 1341 aa20.66■□□□□ 0.9
SRRT-217ENST00000618411 IGF1RP08069 1367 aa20.66■□□□□ 0.9
SRRT-217ENST00000618411 CCDC18Q5T9S5 1454 aa20.66■□□□□ 0.9
SRRT-217ENST00000618411 KDM5BQ9UGL1 1544 aa20.64■□□□□ 0.9
SRRT-217ENST00000618411 NCOA2Q15596 1464 aa20.64■□□□□ 0.89
SRRT-217ENST00000618411 PCF11O94913 1555 aaKnown RBP20.62■□□□□ 0.89
SRRT-217ENST00000618411 IPO9Q96P70 1041 aaKnown RBP20.62■□□□□ 0.89
SRRT-217ENST00000618411 HFM1A2PYH4 1435 aa20.62■□□□□ 0.89
SRRT-217ENST00000618411 RTL5Q5HYW3 569 aaPredicted RBP20.62■□□□□ 0.89
SRRT-217ENST00000618411 ANO8Q9HCE9 1232 aaPredicted RBP20.62■□□□□ 0.89
SRRT-217ENST00000618411 CNTLNQ9NXG0 1405 aa20.61■□□□□ 0.89
SRRT-217ENST00000618411 ANP32AP39687 249 aaKnown RBP20.61■□□□□ 0.89
SRRT-217ENST00000618411 HSPA5P11021 654 aaKnown RBP20.6■□□□□ 0.89
SRRT-217ENST00000618411 CCDC184Q52MB2 194 aa20.6■□□□□ 0.89
SRRT-217ENST00000618411 CARMIL1Q5VZK9 1371 aa20.59■□□□□ 0.89
SRRT-217ENST00000618411 PRKRIP1Q9H875 184 aaPredicted RBP20.57■□□□□ 0.88
SRRT-217ENST00000618411 FGD6Q6ZV73 1430 aa20.57■□□□□ 0.88
SRRT-217ENST00000618411 FYCO1Q9BQS8 1478 aa20.56■□□□□ 0.88
SRRT-217ENST00000618411 PTPN23Q9H3S7 1636 aa20.56■□□□□ 0.88
SRRT-217ENST00000618411 ZBTB47Q9UFB7 747 aaPredicted RBP20.56■□□□□ 0.88
SRRT-217ENST00000618411 EIF4G2P78344 907 aaKnown RBP eCLIP20.55■□□□□ 0.88
SRRT-217ENST00000618411 FAM9BQ8IZU0 186 aa20.55■□□□□ 0.88
SRRT-217ENST00000618411 MRS2Q9HD23 443 aa20.54■□□□□ 0.88
SRRT-217ENST00000618411 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.881e-9■■■■■ 27
SRRT-217ENST00000618411 CFTRP13569 1480 aa20.52■□□□□ 0.88
SRRT-217ENST00000618411 CASKIN1Q8WXD9 1431 aa20.51■□□□□ 0.87
SRRT-217ENST00000618411 NCAPD3P42695 1498 aa20.51■□□□□ 0.87
SRRT-217ENST00000618411 NAIPQ13075 1403 aa20.51■□□□□ 0.87
SRRT-217ENST00000618411 ATP1B4Q9UN42 357 aaPredicted RBP20.51■□□□□ 0.87
SRRT-217ENST00000618411 SMG6Q86US8 1419 aaKnown RBP20.5■□□□□ 0.87
SRRT-217ENST00000618411 PTPRKQ15262 1439 aa20.5■□□□□ 0.87
SRRT-217ENST00000618411 FGD5Q6ZNL6 1462 aa20.49■□□□□ 0.87
SRRT-217ENST00000618411 SALL2Q9Y467 1007 aaPredicted RBP20.49■□□□□ 0.87
SRRT-217ENST00000618411 RNF123Q5XPI4 1314 aa20.49■□□□□ 0.87
SRRT-217ENST00000618411 HMGXB3Q12766 1538 aa20.49■□□□□ 0.87
SRRT-217ENST00000618411 NCOA1Q15788 1441 aa20.48■□□□□ 0.87
SRRT-217ENST00000618411 CCDC136Q96JN2 1154 aa20.48■□□□□ 0.87
SRRT-217ENST00000618411 CCDC7Q96M83 1385 aa20.47■□□□□ 0.87
SRRT-217ENST00000618411 FMN1Q68DA7 1419 aa20.47■□□□□ 0.87
SRRT-217ENST00000618411 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
SRRT-217ENST00000618411 EFCAB5A4FU69 1503 aa20.44■□□□□ 0.86
SRRT-217ENST00000618411 FHOD3Q2V2M9 1422 aa20.43■□□□□ 0.86
SRRT-217ENST00000618411 IL27Q8NEV9 243 aa20.42■□□□□ 0.86
SRRT-217ENST00000618411 USP35Q9P2H5 1018 aa20.41■□□□□ 0.86
SRRT-217ENST00000618411 NUDCQ9Y266 331 aa20.41■□□□□ 0.86
SRRT-217ENST00000618411 AKNAQ7Z591 1439 aa20.41■□□□□ 0.86
SRRT-217ENST00000618411 C11orf95C9JLR9 678 aaPredicted RBP20.41■□□□□ 0.86
SRRT-217ENST00000618411 MTUS2Q5JR59 1369 aa20.37■□□□□ 0.85
SRRT-217ENST00000618411 MYOM3Q5VTT5 1437 aa20.35■□□□□ 0.85
SRRT-217ENST00000618411 PRDM2Q13029 1718 aa20.35■□□□□ 0.85
SRRT-217ENST00000618411 HECW1Q76N89 1606 aa20.35■□□□□ 0.85
SRRT-217ENST00000618411 ABCA5Q8WWZ7 1642 aa20.35■□□□□ 0.85
SRRT-217ENST00000618411 DENND4BO75064 1496 aaPredicted RBP20.33■□□□□ 0.84
SRRT-217ENST00000618411 L3MBTL2Q969R5 705 aa20.32■□□□□ 0.84
SRRT-217ENST00000618411 POLR1AO95602 1720 aaPredicted RBP20.31■□□□□ 0.84
SRRT-217ENST00000618411 WASHC2CQ9Y4E1 1318 aa20.31■□□□□ 0.84
SRRT-217ENST00000618411 KIF7Q2M1P5 1343 aa20.3■□□□□ 0.84
SRRT-217ENST00000618411 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
SRRT-217ENST00000618411 NEFMP07197 916 aa20.28■□□□□ 0.84
SRRT-217ENST00000618411 TCERG1O14776 1098 aaKnown RBP20.28■□□□□ 0.84
SRRT-217ENST00000618411 SPATA31E1Q6ZUB1 1445 aa20.28■□□□□ 0.84
SRRT-217ENST00000618411 GCC2Q8IWJ2 1684 aa20.27■□□□□ 0.84
SRRT-217ENST00000618411 PPM1GO15355 546 aaPredicted RBP20.27■□□□□ 0.84
SRRT-217ENST00000618411 RTN4Q9NQC3 1192 aaKnown RBP20.27■□□□□ 0.84
SRRT-217ENST00000618411 SUPT6HQ7KZ85 1726 aaKnown RBP20.24■□□□□ 0.83
SRRT-217ENST00000618411 MPHOSPH9Q99550 1183 aa20.24■□□□□ 0.83
SRRT-217ENST00000618411 RRP7BPQ9NSQ0 103 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms