RNA–Protein interactions for RNA: ENST00000618010.4

RAB4A-205, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB4A, Length 2,799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-205ENST00000618010 FKBP8Q14318 412 aa26.49■■□□□ 1.83
RAB4A-205ENST00000618010 POLA1P09884 1462 aaPredicted RBP26.47■■□□□ 1.83
RAB4A-205ENST00000618010 KANK4Q5T7N3 995 aaPredicted RBP26.46■■□□□ 1.83
RAB4A-205ENST00000618010 DHX57Q6P158 1386 aaKnown RBP26.44■■□□□ 1.82
RAB4A-205ENST00000618010 P3H3Q8IVL6 736 aa26.44■■□□□ 1.82
RAB4A-205ENST00000618010 DNMBPQ6XZF7 1577 aa26.43■■□□□ 1.82
RAB4A-205ENST00000618010 URB2Q14146 1524 aaKnown RBP26.41■■□□□ 1.82
RAB4A-205ENST00000618010 ARHGAP35Q9NRY4 1499 aa26.39■■□□□ 1.82
RAB4A-205ENST00000618010 TDRD9Q8NDG6 1382 aaKnown RBP26.38■■□□□ 1.81
RAB4A-205ENST00000618010 LAMC3Q9Y6N6 1575 aa26.36■■□□□ 1.81
RAB4A-205ENST00000618010 ITGAEP38570 1179 aa26.35■■□□□ 1.81
RAB4A-205ENST00000618010 RBM19Q9Y4C8 960 aaKnown RBP26.34■■□□□ 1.81
RAB4A-205ENST00000618010 PDS5BQ9NTI5 1447 aa26.32■■□□□ 1.8
RAB4A-205ENST00000618010 ABCA10Q8WWZ4 1543 aa26.31■■□□□ 1.8
RAB4A-205ENST00000618010 ATP1B4Q9UN42 357 aaPredicted RBP26.29■■□□□ 1.8
RAB4A-205ENST00000618010 DDX10Q13206 875 aaKnown RBP26.23■■□□□ 1.79
RAB4A-205ENST00000618010 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
RAB4A-205ENST00000618010 NEFLP07196 543 aa26.19■■□□□ 1.78
RAB4A-205ENST00000618010 TRIM52Q96A61 297 aa26.18■■□□□ 1.78
RAB4A-205ENST00000618010 FHOD3Q2V2M9 1422 aa26.12■■□□□ 1.77
RAB4A-205ENST00000618010 MSH5O43196 834 aa26.12■■□□□ 1.77
RAB4A-205ENST00000618010 HIRIP3Q9BW71 556 aaPredicted RBP26.11■■□□□ 1.77
RAB4A-205ENST00000618010 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
RAB4A-205ENST00000618010 AQRO60306 1485 aaKnown RBP eCLIP26.04■■□□□ 1.765e-10■■■■■ 39.2
RAB4A-205ENST00000618010 WDR97A6NE52 1622 aa26.01■■□□□ 1.75
RAB4A-205ENST00000618010 ABCA5Q8WWZ7 1642 aa25.98■■□□□ 1.75
RAB4A-205ENST00000618010 CUL7Q14999 1698 aa25.98■■□□□ 1.75
RAB4A-205ENST00000618010 SIN3AQ96ST3 1273 aa25.97■■□□□ 1.75
RAB4A-205ENST00000618010 IRX6P78412 446 aaPredicted RBP25.95■■□□□ 1.74
RAB4A-205ENST00000618010 CCNB3Q8WWL7 1395 aa25.94■■□□□ 1.74
RAB4A-205ENST00000618010 TARBP1Q13395 1621 aaKnown RBP25.93■■□□□ 1.74
RAB4A-205ENST00000618010 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
RAB4A-205ENST00000618010 PCF11O94913 1555 aaKnown RBP25.92■■□□□ 1.74
RAB4A-205ENST00000618010 TIAM1Q13009 1591 aa25.92■■□□□ 1.74
RAB4A-205ENST00000618010 FHAD1B1AJZ9 1412 aa25.92■■□□□ 1.74
RAB4A-205ENST00000618010 ERICH6Q7L0X2 663 aa25.92■■□□□ 1.74
RAB4A-205ENST00000618010 RRBP1Q9P2E9 1410 aaKnown RBP25.9■■□□□ 1.74
RAB4A-205ENST00000618010 FAM50AQ14320 339 aaKnown RBP25.89■■□□□ 1.74
RAB4A-205ENST00000618010 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
RAB4A-205ENST00000618010 LRRC9Q6ZRR7 1453 aa25.88■■□□□ 1.73
RAB4A-205ENST00000618010 PHLDB1Q86UU1 1377 aa25.87■■□□□ 1.73
RAB4A-205ENST00000618010 PPP1R15AO75807 674 aaPredicted RBP25.86■■□□□ 1.73
RAB4A-205ENST00000618010 RAB3GAP2Q9H2M9 1393 aa25.86■■□□□ 1.73
RAB4A-205ENST00000618010 CTTNBP2Q8WZ74 1663 aa25.84■■□□□ 1.73
RAB4A-205ENST00000618010 ANP32CO43423 234 aa25.84■■□□□ 1.73
RAB4A-205ENST00000618010 ERCC6Q03468 1493 aa25.83■■□□□ 1.73
RAB4A-205ENST00000618010 ARID3CA6NKF2 412 aa25.83■■□□□ 1.72
RAB4A-205ENST00000618010 EFCAB5A4FU69 1503 aa25.78■■□□□ 1.72
RAB4A-205ENST00000618010 CDK11AQ9UQ88 783 aaPredicted RBP25.77■■□□□ 1.72
RAB4A-205ENST00000618010 CASKIN1Q8WXD9 1431 aa25.77■■□□□ 1.72
RAB4A-205ENST00000618010 MAPKBP1O60336 1514 aa25.74■■□□□ 1.71
RAB4A-205ENST00000618010 MAP3K1Q13233 1512 aa25.74■■□□□ 1.71
RAB4A-205ENST00000618010 FMN1Q68DA7 1419 aa25.73■■□□□ 1.71
RAB4A-205ENST00000618010 FYCO1Q9BQS8 1478 aa25.73■■□□□ 1.71
RAB4A-205ENST00000618010 CCER2I3L3R5 266 aa25.72■■□□□ 1.71
RAB4A-205ENST00000618010 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
RAB4A-205ENST00000618010 GRIN2BQ13224 1484 aa25.7■■□□□ 1.71
RAB4A-205ENST00000618010 FBLN2P98095 1184 aa25.7■■□□□ 1.71
RAB4A-205ENST00000618010 FANCIQ9NVI1 1328 aa25.69■■□□□ 1.7
RAB4A-205ENST00000618010 SNAPC4Q5SXM2 1469 aa25.69■■□□□ 1.7
RAB4A-205ENST00000618010 HNRNPUQ00839 825 aaKnown RBP eCLIP25.68■■□□□ 1.7
RAB4A-205ENST00000618010 IFT140Q96RY7 1462 aa25.68■■□□□ 1.7
RAB4A-205ENST00000618010 MTUS2Q5JR59 1369 aa25.67■■□□□ 1.7
RAB4A-205ENST00000618010 WDR62O43379 1518 aa25.67■■□□□ 1.7
RAB4A-205ENST00000618010 CFAP43Q8NDM7 1665 aa25.66■■□□□ 1.7
RAB4A-205ENST00000618010 SAMD9Q5K651 1589 aa25.64■■□□□ 1.7
RAB4A-205ENST00000618010 ADAMTS12P58397 1594 aa25.64■■□□□ 1.69
RAB4A-205ENST00000618010 DEKP35659 375 aaKnown RBP25.62■■□□□ 1.69
RAB4A-205ENST00000618010 SETD5Q9C0A6 1442 aa25.61■■□□□ 1.69
RAB4A-205ENST00000618010 IQGAP2Q13576 1575 aa25.56■■□□□ 1.68
RAB4A-205ENST00000618010 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
RAB4A-205ENST00000618010 LRRIQ1Q96JM4 1722 aa25.53■■□□□ 1.68
RAB4A-205ENST00000618010 EIF4G3O43432 1585 aaKnown RBP25.53■■□□□ 1.68
RAB4A-205ENST00000618010 NBR1Q14596 966 aa25.53■■□□□ 1.68
RAB4A-205ENST00000618010 PRKCSHP14314 528 aaPredicted RBP25.52■■□□□ 1.68
RAB4A-205ENST00000618010 FGD6Q6ZV73 1430 aa25.48■■□□□ 1.67
RAB4A-205ENST00000618010 B4GALNT3Q6L9W6 998 aa25.48■■□□□ 1.67
RAB4A-205ENST00000618010 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
RAB4A-205ENST00000618010 NCOA2Q15596 1464 aa25.47■■□□□ 1.67
RAB4A-205ENST00000618010 MAGI3Q5TCQ9 1506 aa25.45■■□□□ 1.67
RAB4A-205ENST00000618010 GRIN2AQ12879 1464 aa25.45■■□□□ 1.66
RAB4A-205ENST00000618010 CDK13Q14004 1512 aaKnown RBP25.45■■□□□ 1.66
RAB4A-205ENST00000618010 CHIC2Q9UKJ5 165 aa25.41■■□□□ 1.66
RAB4A-205ENST00000618010 PTPRKQ15262 1439 aa25.41■■□□□ 1.66
RAB4A-205ENST00000618010 PPP4R2Q9NY27 417 aa25.4■■□□□ 1.66
RAB4A-205ENST00000618010 KIAA0586Q9BVV6 1533 aa25.4■■□□□ 1.66
RAB4A-205ENST00000618010 EPRSP07814 1512 aaKnown RBP25.38■■□□□ 1.65
RAB4A-205ENST00000618010 TIMELESSQ9UNS1 1208 aa25.38■■□□□ 1.65
RAB4A-205ENST00000618010 TONSLQ96HA7 1378 aa25.38■■□□□ 1.65
RAB4A-205ENST00000618010 PAK3O75914 559 aaPredicted RBP25.37■■□□□ 1.65
RAB4A-205ENST00000618010 DISP1Q96F81 1524 aa25.37■■□□□ 1.65
RAB4A-205ENST00000618010 MYOM3Q5VTT5 1437 aa25.36■■□□□ 1.65
RAB4A-205ENST00000618010 UGGT2Q9NYU1 1516 aa25.35■■□□□ 1.65
RAB4A-205ENST00000618010 CCDC184Q52MB2 194 aa25.35■■□□□ 1.65
RAB4A-205ENST00000618010 RRP7BPQ9NSQ0 103 aa25.33■■□□□ 1.65
RAB4A-205ENST00000618010 FAM9BQ8IZU0 186 aa25.32■■□□□ 1.64
RAB4A-205ENST00000618010 MYT1LQ9UL68 1186 aa25.32■■□□□ 1.64
RAB4A-205ENST00000618010 ANO8Q9HCE9 1232 aaPredicted RBP25.31■■□□□ 1.64
RAB4A-205ENST00000618010 NOP58Q9Y2X3 529 aaKnown RBP25.31■■□□□ 1.64
RAB4A-205ENST00000618010 EHBP1L1Q8N3D4 1523 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms