RNA–Protein interactions for RNA: ENST00000617888.1

LINC01971-201, Transcript of long intergenic non-protein coding RNA 1971, humanhuman

BASIC

Gene LINC01971, Length 1,048 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01971-201ENST00000617888 JPH4Q96JJ6 628 aa44.09■■■■■ 4.65
LINC01971-201ENST00000617888 KIAA0586Q9BVV6 1533 aa44.05■■■■■ 4.64
LINC01971-201ENST00000617888 PRG4Q92954 1404 aaPredicted RBP44.04■■■■■ 4.64
LINC01971-201ENST00000617888 RAPGEF2Q9Y4G8 1499 aa43.86■■■■■ 4.61
LINC01971-201ENST00000617888 TRHP20396 242 aaPredicted RBP43.79■■■■■ 4.6
LINC01971-201ENST00000617888 IQGAP2Q13576 1575 aa43.71■■■■■ 4.59
LINC01971-201ENST00000617888 CARMIL2Q6F5E8 1435 aa43.61■■■■■ 4.57
LINC01971-201ENST00000617888 PRXQ9BXM0 1461 aa43.6■■■■■ 4.57
LINC01971-201ENST00000617888 UGGT2Q9NYU1 1516 aa43.48■■■■■ 4.55
LINC01971-201ENST00000617888 TNIKQ9UKE5 1360 aa43.48■■■■■ 4.55
LINC01971-201ENST00000617888 PTPRGP23470 1445 aa43.48■■■■■ 4.55
LINC01971-201ENST00000617888 EEA1Q15075 1411 aa43.48■■■■■ 4.55
LINC01971-201ENST00000617888 CSRNP3Q8WYN3 585 aa43.43■■■■■ 4.54
LINC01971-201ENST00000617888 DISP1Q96F81 1524 aa43.43■■■■■ 4.54
LINC01971-201ENST00000617888 ADCY10Q96PN6 1610 aa43.41■■■■■ 4.54
LINC01971-201ENST00000617888 CTTNBP2Q8WZ74 1663 aa43.4■■■■■ 4.54
LINC01971-201ENST00000617888 NPM1P06748 294 aaKnown RBP eCLIP43.39■■■■■ 4.54
LINC01971-201ENST00000617888 KIAA0556O60303 1618 aa43.3■■■■■ 4.52
LINC01971-201ENST00000617888 MAPKBP1O60336 1514 aa43.29■■■■■ 4.52
LINC01971-201ENST00000617888 TTBK1Q5TCY1 1321 aaPredicted RBP43.26■■■■■ 4.52
LINC01971-201ENST00000617888 CHIC1Q5VXU3 224 aa43.26■■■■■ 4.52
LINC01971-201ENST00000617888 GOLGA3Q08378 1498 aa43.23■■■■■ 4.51
LINC01971-201ENST00000617888 UHRF1BP1LA0JNW5 1464 aa43.19■■■■■ 4.51
LINC01971-201ENST00000617888 UACAQ9BZF9 1416 aa43.18■■■■■ 4.5
LINC01971-201ENST00000617888 ABCC2Q92887 1545 aa43.17■■■■■ 4.5
LINC01971-201ENST00000617888 ABCC10Q5T3U5 1492 aa43.13■■■■■ 4.49
LINC01971-201ENST00000617888 FAM9AQ8IZU1 332 aaPredicted RBP43.1■■■■■ 4.49
LINC01971-201ENST00000617888 KIF13AQ9H1H9 1805 aa43.08■■■■■ 4.49
LINC01971-201ENST00000617888 FAM69CQ0P6D2 419 aa43.02■■■■■ 4.48
LINC01971-201ENST00000617888 DIP2BQ9P265 1576 aa43.01■■■■■ 4.48
LINC01971-201ENST00000617888 KIF21BO75037 1637 aa43■■■■■ 4.47
LINC01971-201ENST00000617888 KDM5BQ9UGL1 1544 aa42.97■■■■■ 4.47
LINC01971-201ENST00000617888 PLB1Q6P1J6 1458 aa42.93■■■■■ 4.46
LINC01971-201ENST00000617888 ASXL2Q76L83 1435 aa42.91■■■■■ 4.46
LINC01971-201ENST00000617888 SAMD9Q5K651 1589 aa42.86■■■■■ 4.45
LINC01971-201ENST00000617888 ABCA8O94911 1581 aa42.86■■■■■ 4.45
LINC01971-201ENST00000617888 ZCCHC11Q5TAX3 1644 aaKnown RBP42.82■■■■■ 4.44
LINC01971-201ENST00000617888 P3H3Q8IVL6 736 aa42.78■■■■■ 4.44
LINC01971-201ENST00000617888 GLI2P10070 1586 aa42.73■■■■■ 4.43
LINC01971-201ENST00000617888 EPRSP07814 1512 aaKnown RBP42.66■■■■■ 4.42
LINC01971-201ENST00000617888 WDR7Q9Y4E6 1490 aa42.64■■■■■ 4.42
LINC01971-201ENST00000617888 EFCAB5A4FU69 1503 aa42.64■■■■■ 4.42
LINC01971-201ENST00000617888 RANGAP1P46060 587 aaPredicted RBP42.63■■■■■ 4.41
LINC01971-201ENST00000617888 UBTFP17480 764 aaKnown RBP42.62■■■■■ 4.41
LINC01971-201ENST00000617888 FHOD3Q2V2M9 1422 aa42.58■■■■■ 4.41
LINC01971-201ENST00000617888 TSPOAP1O95153 1857 aa42.56■■■■■ 4.4
LINC01971-201ENST00000617888 RAPGEF6Q8TEU7 1601 aa42.53■■■■■ 4.4
LINC01971-201ENST00000617888 EHMT2Q96KQ7 1210 aa42.52■■■■■ 4.4
LINC01971-201ENST00000617888 ATP10BO94823 1461 aa42.49■■■■■ 4.39
LINC01971-201ENST00000617888 MAP3K4Q9Y6R4 1608 aa42.48■■■■■ 4.39
LINC01971-201ENST00000617888 KDM6BO15054 1643 aa42.44■■■■■ 4.38
LINC01971-201ENST00000617888 PPRC1Q5VV67 1664 aaKnown RBP42.44■■■■■ 4.38
LINC01971-201ENST00000617888 ARID3CA6NKF2 412 aa42.41■■■■■ 4.38
LINC01971-201ENST00000617888 NUP153P49790 1475 aaKnown RBP42.39■■■■■ 4.38
LINC01971-201ENST00000617888 TEX14Q8IWB6 1497 aa42.38■■■■■ 4.38
LINC01971-201ENST00000617888 KCNH8Q96L42 1107 aa42.35■■■■■ 4.37
LINC01971-201ENST00000617888 ARHGAP35Q9NRY4 1499 aa42.31■■■■■ 4.36
LINC01971-201ENST00000617888 CFAP43Q8NDM7 1665 aa42.3■■■■■ 4.36
LINC01971-201ENST00000617888 CD109Q6YHK3 1445 aa42.29■■■■■ 4.36
LINC01971-201ENST00000617888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.27■■■■■ 4.36
LINC01971-201ENST00000617888 HNRNPUL2Q1KMD3 747 aaKnown RBP42.27■■■■■ 4.36
LINC01971-201ENST00000617888 FMN1Q68DA7 1419 aa42.26■■■■■ 4.36
LINC01971-201ENST00000617888 MAGI3Q5TCQ9 1506 aa42.25■■■■■ 4.35
LINC01971-201ENST00000617888 ABCA9Q8IUA7 1624 aa42.13■■■■■ 4.33
LINC01971-201ENST00000617888 PLEKHD1A6NEE1 506 aa42.11■■■■■ 4.33
LINC01971-201ENST00000617888 COL17A1Q9UMD9 1497 aaPredicted RBP42.1■■■■■ 4.33
LINC01971-201ENST00000617888 HECW1Q76N89 1606 aa42.07■■■■■ 4.33
LINC01971-201ENST00000617888 CDK13Q14004 1512 aaKnown RBP42.01■■■■■ 4.32
LINC01971-201ENST00000617888 ATP1B4Q9UN42 357 aaPredicted RBP41.96■■■■■ 4.31
LINC01971-201ENST00000617888 PHLDB1Q86UU1 1377 aa41.95■■■■■ 4.31
LINC01971-201ENST00000617888 CLIP1P30622 1438 aa41.93■■■■■ 4.3
LINC01971-201ENST00000617888 AEBP2Q6ZN18 517 aaPredicted RBP41.92■■■■■ 4.3
LINC01971-201ENST00000617888 ARAP3Q8WWN8 1544 aa41.9■■■■■ 4.3
LINC01971-201ENST00000617888 NEO1Q92859 1461 aa41.88■■■■■ 4.29
LINC01971-201ENST00000617888 CDK11AQ9UQ88 783 aaPredicted RBP41.88■■■■■ 4.29
LINC01971-201ENST00000617888 CASKIN1Q8WXD9 1431 aa41.86■■■■■ 4.29
LINC01971-201ENST00000617888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.85■■■■■ 4.29
LINC01971-201ENST00000617888 PCF11O94913 1555 aaKnown RBP41.8■■■■■ 4.28
LINC01971-201ENST00000617888 TTC37Q6PGP7 1564 aa41.77■■■■■ 4.28
LINC01971-201ENST00000617888 CCDC18Q5T9S5 1454 aa41.77■■■■■ 4.28
LINC01971-201ENST00000617888 FYCO1Q9BQS8 1478 aa41.74■■■■■ 4.27
LINC01971-201ENST00000617888 TROQ12816 1431 aaPredicted RBP41.73■■■■■ 4.27
LINC01971-201ENST00000617888 LRRIQ1Q96JM4 1722 aa41.71■■■■■ 4.27
LINC01971-201ENST00000617888 CFAP74Q9C0B2 1584 aa41.7■■■■■ 4.27
LINC01971-201ENST00000617888 FANCAO15360 1455 aa41.69■■■■■ 4.26
LINC01971-201ENST00000617888 KIF14Q15058 1648 aa41.66■■■■■ 4.26
LINC01971-201ENST00000617888 KDM4FA0A1W2PPD8 638 aa41.64■■■■■ 4.26
LINC01971-201ENST00000617888 PLCH2O75038 1416 aa41.63■■■■■ 4.26
LINC01971-201ENST00000617888 CEP162Q5TB80 1403 aa41.63■■■■■ 4.26
LINC01971-201ENST00000617888 AKNAQ7Z591 1439 aa41.63■■■■■ 4.26
LINC01971-201ENST00000617888 RAPGEF3O95398 923 aa41.59■■■■■ 4.25
LINC01971-201ENST00000617888 DENND4BO75064 1496 aaPredicted RBP41.56■■■■■ 4.24
LINC01971-201ENST00000617888 FRMPD1Q5SYB0 1578 aa41.54■■■■■ 4.24
LINC01971-201ENST00000617888 ADGRL1O94910 1474 aa41.53■■■■■ 4.24
LINC01971-201ENST00000617888 MYO5CQ9NQX4 1742 aa41.52■■■■■ 4.24
LINC01971-201ENST00000617888 EFCAB2Q5VUJ9 269 aa41.47■■■■■ 4.23
LINC01971-201ENST00000617888 RICTORQ6R327 1708 aa41.44■■■■■ 4.22
LINC01971-201ENST00000617888 LOC105371045A0A1W2PR82 267 aa41.44■■■■■ 4.22
LINC01971-201ENST00000617888 ARHGAP5Q13017 1502 aa41.39■■■■■ 4.22
LINC01971-201ENST00000617888 SCAPERQ9BY12 1400 aa41.38■■■■■ 4.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms