RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 GAPVD1Q14C86 1478 aa29.65■■■□□ 2.34
PCDHA13-203ENST00000617769 ATP1B4Q9UN42 357 aaPredicted RBP29.62■■■□□ 2.33
PCDHA13-203ENST00000617769 CUL7Q14999 1698 aa29.61■■■□□ 2.33
PCDHA13-203ENST00000617769 ABCA5Q8WWZ7 1642 aa29.59■■■□□ 2.33
PCDHA13-203ENST00000617769 FHOD3Q2V2M9 1422 aa29.58■■■□□ 2.33
PCDHA13-203ENST00000617769 PELP1Q8IZL8 1130 aaKnown RBP29.57■■■□□ 2.32
PCDHA13-203ENST00000617769 GTF3C3Q9Y5Q9 886 aa29.57■■■□□ 2.32
PCDHA13-203ENST00000617769 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
PCDHA13-203ENST00000617769 AQRO60306 1485 aaKnown RBP eCLIP29.5■■■□□ 2.31
PCDHA13-203ENST00000617769 MRC2Q9UBG0 1479 aa29.5■■■□□ 2.31
PCDHA13-203ENST00000617769 ITGAEP38570 1179 aa29.45■■■□□ 2.31
PCDHA13-203ENST00000617769 MIER1Q8N108 512 aa29.45■■■□□ 2.31
PCDHA13-203ENST00000617769 CTTNBP2Q8WZ74 1663 aa29.45■■■□□ 2.31
PCDHA13-203ENST00000617769 TIAM1Q13009 1591 aa29.45■■■□□ 2.3
PCDHA13-203ENST00000617769 FHAD1B1AJZ9 1412 aa29.44■■■□□ 2.3
PCDHA13-203ENST00000617769 PCF11O94913 1555 aaKnown RBP29.43■■■□□ 2.3
PCDHA13-203ENST00000617769 YTHDC1Q96MU7 727 aaKnown RBP29.42■■■□□ 2.3
PCDHA13-203ENST00000617769 DHX57Q6P158 1386 aaKnown RBP29.42■■■□□ 2.3
PCDHA13-203ENST00000617769 RRBP1Q9P2E9 1410 aaKnown RBP29.41■■■□□ 2.3
PCDHA13-203ENST00000617769 CCNB3Q8WWL7 1395 aa29.38■■■□□ 2.29
PCDHA13-203ENST00000617769 CLSPNQ9HAW4 1339 aa29.37■■■□□ 2.29
PCDHA13-203ENST00000617769 LRRC9Q6ZRR7 1453 aa29.37■■■□□ 2.29
PCDHA13-203ENST00000617769 EFCAB5A4FU69 1503 aa29.36■■■□□ 2.29
PCDHA13-203ENST00000617769 ZNF608Q9ULD9 1512 aaPredicted RBP29.34■■■□□ 2.29
PCDHA13-203ENST00000617769 MAP3K1Q13233 1512 aa29.32■■■□□ 2.28
PCDHA13-203ENST00000617769 PHLDB1Q86UU1 1377 aa29.3■■■□□ 2.28
PCDHA13-203ENST00000617769 ERCC6Q03468 1493 aa29.3■■■□□ 2.28
PCDHA13-203ENST00000617769 PBRM1Q86U86 1689 aa29.3■■■□□ 2.28
PCDHA13-203ENST00000617769 CASKIN1Q8WXD9 1431 aa29.27■■■□□ 2.28
PCDHA13-203ENST00000617769 WDR62O43379 1518 aa29.25■■■□□ 2.27
PCDHA13-203ENST00000617769 FYCO1Q9BQS8 1478 aa29.25■■■□□ 2.27
PCDHA13-203ENST00000617769 FMN1Q68DA7 1419 aa29.23■■■□□ 2.27
PCDHA13-203ENST00000617769 IFT140Q96RY7 1462 aa29.22■■■□□ 2.27
PCDHA13-203ENST00000617769 CFAP43Q8NDM7 1665 aa29.22■■■□□ 2.27
PCDHA13-203ENST00000617769 GRIN2BQ13224 1484 aa29.22■■■□□ 2.27
PCDHA13-203ENST00000617769 FAM50AQ14320 339 aaKnown RBP29.22■■■□□ 2.27
PCDHA13-203ENST00000617769 SAMD9Q5K651 1589 aa29.2■■■□□ 2.27
PCDHA13-203ENST00000617769 SNAPC4Q5SXM2 1469 aa29.19■■■□□ 2.26
PCDHA13-203ENST00000617769 ADAMTS12P58397 1594 aa29.19■■■□□ 2.26
PCDHA13-203ENST00000617769 MTUS2Q5JR59 1369 aa29.07■■■□□ 2.24
PCDHA13-203ENST00000617769 IQGAP2Q13576 1575 aa29.06■■■□□ 2.24
PCDHA13-203ENST00000617769 ARID3CA6NKF2 412 aa29.06■■■□□ 2.24
PCDHA13-203ENST00000617769 LRRIQ1Q96JM4 1722 aa29.05■■■□□ 2.24
PCDHA13-203ENST00000617769 EIF4G3O43432 1585 aaKnown RBP29.04■■■□□ 2.24
PCDHA13-203ENST00000617769 THOC2Q8NI27 1593 aaKnown RBP29.04■■■□□ 2.24
PCDHA13-203ENST00000617769 RAB3GAP2Q9H2M9 1393 aa29.03■■■□□ 2.24
PCDHA13-203ENST00000617769 FBLN2P98095 1184 aa29■■■□□ 2.23
PCDHA13-203ENST00000617769 CHMP7Q8WUX9 453 aaPredicted RBP28.94■■■□□ 2.22
PCDHA13-203ENST00000617769 GRIN2AQ12879 1464 aa28.92■■■□□ 2.22
PCDHA13-203ENST00000617769 SETD5Q9C0A6 1442 aa28.92■■■□□ 2.22
PCDHA13-203ENST00000617769 MAPKBP1O60336 1514 aa28.91■■■□□ 2.22
PCDHA13-203ENST00000617769 FGD6Q6ZV73 1430 aa28.9■■■□□ 2.22
PCDHA13-203ENST00000617769 NCOA2Q15596 1464 aa28.89■■■□□ 2.21
PCDHA13-203ENST00000617769 MAGI3Q5TCQ9 1506 aa28.88■■■□□ 2.21
PCDHA13-203ENST00000617769 KIAA0586Q9BVV6 1533 aa28.88■■■□□ 2.21
PCDHA13-203ENST00000617769 UGGT2Q9NYU1 1516 aa28.86■■■□□ 2.21
PCDHA13-203ENST00000617769 CDK13Q14004 1512 aaKnown RBP28.84■■■□□ 2.21
PCDHA13-203ENST00000617769 DISP1Q96F81 1524 aa28.82■■■□□ 2.2
PCDHA13-203ENST00000617769 EPRSP07814 1512 aaKnown RBP28.81■■■□□ 2.2
PCDHA13-203ENST00000617769 MAGI1Q96QZ7 1491 aaPredicted RBP28.8■■■□□ 2.2
PCDHA13-203ENST00000617769 HECW1Q76N89 1606 aa28.79■■■□□ 2.2
PCDHA13-203ENST00000617769 EHBP1L1Q8N3D4 1523 aa28.78■■■□□ 2.2
PCDHA13-203ENST00000617769 CCDC18Q5T9S5 1454 aa28.78■■■□□ 2.2
PCDHA13-203ENST00000617769 MYOM3Q5VTT5 1437 aa28.78■■■□□ 2.2
PCDHA13-203ENST00000617769 SYNJ2O15056 1496 aa28.77■■■□□ 2.2
PCDHA13-203ENST00000617769 PTPRKQ15262 1439 aa28.77■■■□□ 2.2
PCDHA13-203ENST00000617769 SUPT6HQ7KZ85 1726 aaKnown RBP28.77■■■□□ 2.2
PCDHA13-203ENST00000617769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.76■■■□□ 2.2
PCDHA13-203ENST00000617769 KIAA0556O60303 1618 aa28.76■■■□□ 2.19
PCDHA13-203ENST00000617769 CEP170Q5SW79 1584 aa28.76■■■□□ 2.19
PCDHA13-203ENST00000617769 SIN3AQ96ST3 1273 aa28.72■■■□□ 2.19
PCDHA13-203ENST00000617769 JPH4Q96JJ6 628 aa28.67■■■□□ 2.18
PCDHA13-203ENST00000617769 ARHGEF11O15085 1522 aa28.66■■■□□ 2.18
PCDHA13-203ENST00000617769 CHIC2Q9UKJ5 165 aa28.65■■■□□ 2.18
PCDHA13-203ENST00000617769 PTPN23Q9H3S7 1636 aa28.63■■■□□ 2.17
PCDHA13-203ENST00000617769 NUP153P49790 1475 aaKnown RBP28.63■■■□□ 2.17
PCDHA13-203ENST00000617769 NUP160Q12769 1436 aa28.59■■■□□ 2.17
PCDHA13-203ENST00000617769 RRP7BPQ9NSQ0 103 aa28.59■■■□□ 2.17
PCDHA13-203ENST00000617769 PLB1Q6P1J6 1458 aa28.59■■■□□ 2.17
PCDHA13-203ENST00000617769 RAPGEF6Q8TEU7 1601 aa28.57■■■□□ 2.16
PCDHA13-203ENST00000617769 HFM1A2PYH4 1435 aa28.56■■■□□ 2.16
PCDHA13-203ENST00000617769 KCNH8Q96L42 1107 aa28.54■■■□□ 2.16
PCDHA13-203ENST00000617769 NAIPQ13075 1403 aa28.54■■■□□ 2.16
PCDHA13-203ENST00000617769 CARMIL2Q6F5E8 1435 aa28.5■■■□□ 2.15
PCDHA13-203ENST00000617769 TIMELESSQ9UNS1 1208 aa28.5■■■□□ 2.15
PCDHA13-203ENST00000617769 ZNF644Q9H582 1327 aaPredicted RBP28.5■■■□□ 2.15
PCDHA13-203ENST00000617769 PRG4Q92954 1404 aaPredicted RBP28.49■■■□□ 2.15
PCDHA13-203ENST00000617769 DDX10Q13206 875 aaKnown RBP28.49■■■□□ 2.15
PCDHA13-203ENST00000617769 TCOF1Q13428 1488 aaKnown RBP28.49■■■□□ 2.15
PCDHA13-203ENST00000617769 SUPT16HQ9Y5B9 1047 aaKnown RBP28.48■■■□□ 2.15
PCDHA13-203ENST00000617769 CDK11AQ9UQ88 783 aaPredicted RBP28.48■■■□□ 2.15
PCDHA13-203ENST00000617769 PPP1R15AO75807 674 aaPredicted RBP28.44■■■□□ 2.14
PCDHA13-203ENST00000617769 MIA2Q96PC5 1412 aa28.44■■■□□ 2.14
PCDHA13-203ENST00000617769 HIRIP3Q9BW71 556 aaPredicted RBP28.41■■■□□ 2.14
PCDHA13-203ENST00000617769 UACAQ9BZF9 1416 aa28.4■■■□□ 2.14
PCDHA13-203ENST00000617769 TRIM52Q96A61 297 aa28.37■■■□□ 2.13
PCDHA13-203ENST00000617769 TROQ12816 1431 aaPredicted RBP28.36■■■□□ 2.13
PCDHA13-203ENST00000617769 ZNF777Q9ULD5 760 aaPredicted RBP28.35■■■□□ 2.13
PCDHA13-203ENST00000617769 KDM6BO15054 1643 aa28.34■■■□□ 2.13
PCDHA13-203ENST00000617769 CFDP1Q9UEE9 299 aaPredicted RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms