RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 NUP160Q12769 1436 aa32.8■■■□□ 2.84
SDHA-220ENST00000617470 CTTNBP2Q8WZ74 1663 aa32.69■■■□□ 2.82
SDHA-220ENST00000617470 KIAA0586Q9BVV6 1533 aa32.69■■■□□ 2.82
SDHA-220ENST00000617470 RANGAP1P46060 587 aaPredicted RBP32.67■■■□□ 2.82
SDHA-220ENST00000617470 IQGAP2Q13576 1575 aa32.63■■■□□ 2.81
SDHA-220ENST00000617470 CLASP1Q7Z460 1538 aa32.63■■■□□ 2.81
SDHA-220ENST00000617470 TNIKQ9UKE5 1360 aa32.62■■■□□ 2.81
SDHA-220ENST00000617470 JPH4Q96JJ6 628 aa32.57■■■□□ 2.8
SDHA-220ENST00000617470 PRG4Q92954 1404 aaPredicted RBP32.44■■■□□ 2.78
SDHA-220ENST00000617470 SHROOM2Q13796 1616 aa32.44■■■□□ 2.78
SDHA-220ENST00000617470 UGGT2Q9NYU1 1516 aa32.43■■■□□ 2.78
SDHA-220ENST00000617470 CEP162Q5TB80 1403 aa32.43■■■□□ 2.78
SDHA-220ENST00000617470 P3H3Q8IVL6 736 aa32.4■■■□□ 2.78
SDHA-220ENST00000617470 CLIP1P30622 1438 aa32.38■■■□□ 2.77
SDHA-220ENST00000617470 CARMIL2Q6F5E8 1435 aa32.36■■■□□ 2.77
SDHA-220ENST00000617470 DISP1Q96F81 1524 aa32.34■■■□□ 2.77
SDHA-220ENST00000617470 ERCC6L2Q5T890 1561 aa32.33■■■□□ 2.77
SDHA-220ENST00000617470 TTBK1Q5TCY1 1321 aaPredicted RBP32.32■■■□□ 2.76
SDHA-220ENST00000617470 KIAA0556O60303 1618 aa32.3■■■□□ 2.76
SDHA-220ENST00000617470 EFCAB5A4FU69 1503 aa32.3■■■□□ 2.76
SDHA-220ENST00000617470 ARHGAP35Q9NRY4 1499 aa32.29■■■□□ 2.76
SDHA-220ENST00000617470 SAMD9Q5K651 1589 aa32.29■■■□□ 2.76
SDHA-220ENST00000617470 FHOD3Q2V2M9 1422 aa32.25■■■□□ 2.75
SDHA-220ENST00000617470 ARHGEF11O15085 1522 aa32.25■■■□□ 2.75
SDHA-220ENST00000617470 PCGF6Q9BYE7 350 aa32.23■■■□□ 2.75
SDHA-220ENST00000617470 RIMBP3CA6NJZ7 1639 aa32.17■■■□□ 2.74
SDHA-220ENST00000617470 RIMBP3BA6NNM3 1639 aa32.17■■■□□ 2.74
SDHA-220ENST00000617470 RIMBP3Q9UFD9 1639 aa32.17■■■□□ 2.74
SDHA-220ENST00000617470 DNAJC5Q9H3Z4 198 aa32.16■■■□□ 2.74
SDHA-220ENST00000617470 ARAP1Q96P48 1450 aa32.16■■■□□ 2.74
SDHA-220ENST00000617470 PTPRGP23470 1445 aa32.14■■■□□ 2.74
SDHA-220ENST00000617470 TRIM26Q12899 539 aaPredicted RBP32.1■■■□□ 2.73
SDHA-220ENST00000617470 FMN1Q68DA7 1419 aa32.03■■■□□ 2.72
SDHA-220ENST00000617470 CYB5RLQ6IPT4 315 aa32.03■■■□□ 2.72
SDHA-220ENST00000617470 ATP1B4Q9UN42 357 aaPredicted RBP31.98■■■□□ 2.71
SDHA-220ENST00000617470 PLB1Q6P1J6 1458 aa31.97■■■□□ 2.71
SDHA-220ENST00000617470 PPARGC1BQ86YN6 1023 aaKnown RBP31.94■■■□□ 2.7
SDHA-220ENST00000617470 VPS8Q8N3P4 1428 aa31.94■■■□□ 2.7
SDHA-220ENST00000617470 UACAQ9BZF9 1416 aa31.92■■■□□ 2.7
SDHA-220ENST00000617470 RAPGEF6Q8TEU7 1601 aa31.88■■■□□ 2.69
SDHA-220ENST00000617470 ABCA8O94911 1581 aa31.88■■■□□ 2.69
SDHA-220ENST00000617470 ARID3CA6NKF2 412 aa31.88■■■□□ 2.69
SDHA-220ENST00000617470 PCF11O94913 1555 aaKnown RBP31.87■■■□□ 2.69
SDHA-220ENST00000617470 CASKIN1Q8WXD9 1431 aa31.85■■■□□ 2.69
SDHA-220ENST00000617470 ABCC2Q92887 1545 aa31.83■■■□□ 2.69
SDHA-220ENST00000617470 FYCO1Q9BQS8 1478 aa31.81■■■□□ 2.68
SDHA-220ENST00000617470 ADCY10Q96PN6 1610 aa31.79■■■□□ 2.68
SDHA-220ENST00000617470 HECW1Q76N89 1606 aa31.79■■■□□ 2.68
SDHA-220ENST00000617470 UHRF1BP1LA0JNW5 1464 aa31.78■■■□□ 2.68
SDHA-220ENST00000617470 NUP153P49790 1475 aaKnown RBP31.78■■■□□ 2.68
SDHA-220ENST00000617470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.76■■■□□ 2.68
SDHA-220ENST00000617470 HNRNPUL2Q1KMD3 747 aaKnown RBP31.76■■■□□ 2.68
SDHA-220ENST00000617470 NPM1P06748 294 aaKnown RBP eCLIP31.72■■■□□ 2.67
SDHA-220ENST00000617470 APLP2Q06481 763 aa31.7■■■□□ 2.66
SDHA-220ENST00000617470 EPRSP07814 1512 aaKnown RBP31.69■■■□□ 2.66
SDHA-220ENST00000617470 CDK13Q14004 1512 aaKnown RBP31.68■■■□□ 2.66
SDHA-220ENST00000617470 ATP10BO94823 1461 aa31.67■■■□□ 2.66
SDHA-220ENST00000617470 KDM5BQ9UGL1 1544 aa31.65■■■□□ 2.66
SDHA-220ENST00000617470 LRRIQ1Q96JM4 1722 aa31.65■■■□□ 2.66
SDHA-220ENST00000617470 CCDC18Q5T9S5 1454 aa31.64■■■□□ 2.66
SDHA-220ENST00000617470 ZCCHC11Q5TAX3 1644 aaKnown RBP31.62■■■□□ 2.65
SDHA-220ENST00000617470 CDK11AQ9UQ88 783 aaPredicted RBP31.56■■■□□ 2.64
SDHA-220ENST00000617470 TIAM1Q13009 1591 aa31.54■■■□□ 2.64
SDHA-220ENST00000617470 HRCP23327 699 aa31.54■■■□□ 2.64
SDHA-220ENST00000617470 PLEKHD1A6NEE1 506 aa31.53■■■□□ 2.64
SDHA-220ENST00000617470 CFAP43Q8NDM7 1665 aa31.51■■■□□ 2.64
SDHA-220ENST00000617470 ASXL2Q76L83 1435 aa31.48■■■□□ 2.63
SDHA-220ENST00000617470 MAP3K1Q13233 1512 aa31.48■■■□□ 2.63
SDHA-220ENST00000617470 MTUS2Q5JR59 1369 aa31.48■■■□□ 2.63
SDHA-220ENST00000617470 KANK4Q5T7N3 995 aaPredicted RBP31.47■■■□□ 2.63
SDHA-220ENST00000617470 KCNH8Q96L42 1107 aa31.44■■■□□ 2.62
SDHA-220ENST00000617470 MAGI3Q5TCQ9 1506 aa31.43■■■□□ 2.62
SDHA-220ENST00000617470 MAPKBP1O60336 1514 aa31.41■■■□□ 2.62
SDHA-220ENST00000617470 LRRC9Q6ZRR7 1453 aa31.41■■■□□ 2.62
SDHA-220ENST00000617470 WDR7Q9Y4E6 1490 aa31.41■■■□□ 2.62
SDHA-220ENST00000617470 TROQ12816 1431 aaPredicted RBP31.39■■■□□ 2.62
SDHA-220ENST00000617470 EHBP1L1Q8N3D4 1523 aa31.36■■■□□ 2.61
SDHA-220ENST00000617470 KIF14Q15058 1648 aa31.27■■■□□ 2.6
SDHA-220ENST00000617470 SUPT6HQ7KZ85 1726 aaKnown RBP31.23■■■□□ 2.59
SDHA-220ENST00000617470 FAM69CQ0P6D2 419 aa31.23■■■□□ 2.59
SDHA-220ENST00000617470 NCOA2Q15596 1464 aa31.21■■■□□ 2.59
SDHA-220ENST00000617470 ABCC10Q5T3U5 1492 aa31.21■■■□□ 2.59
SDHA-220ENST00000617470 TRHP20396 242 aaPredicted RBP31.19■■■□□ 2.58
SDHA-220ENST00000617470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.19■■■□□ 2.582e-7■■□□□ 12
SDHA-220ENST00000617470 DIP2BQ9P265 1576 aa31.18■■■□□ 2.58
SDHA-220ENST00000617470 TTC37Q6PGP7 1564 aa31.16■■■□□ 2.58
SDHA-220ENST00000617470 CCNB3Q8WWL7 1395 aa31.15■■■□□ 2.58
SDHA-220ENST00000617470 ABCA9Q8IUA7 1624 aa31.12■■■□□ 2.57
SDHA-220ENST00000617470 GLI2P10070 1586 aa31.1■■■□□ 2.57
SDHA-220ENST00000617470 PHLDB1Q86UU1 1377 aa31.09■■■□□ 2.57
SDHA-220ENST00000617470 CD109Q6YHK3 1445 aa31.08■■■□□ 2.57
SDHA-220ENST00000617470 KIF13AQ9H1H9 1805 aa31.07■■■□□ 2.57
SDHA-220ENST00000617470 GPATCH8Q9UKJ3 1502 aaKnown RBP31.05■■■□□ 2.56
SDHA-220ENST00000617470 MYO5CQ9NQX4 1742 aa31.03■■■□□ 2.56
SDHA-220ENST00000617470 CFDP1Q9UEE9 299 aaPredicted RBP31.02■■■□□ 2.56
SDHA-220ENST00000617470 MYOM3Q5VTT5 1437 aa31.02■■■□□ 2.56
SDHA-220ENST00000617470 MAP3K4Q9Y6R4 1608 aa31.01■■■□□ 2.56
SDHA-220ENST00000617470 CDC42BPAQ5VT25 1732 aa31.01■■■□□ 2.55
SDHA-220ENST00000617470 PLCH2O75038 1416 aa31■■■□□ 2.55
SDHA-220ENST00000617470 ZNF777Q9ULD5 760 aaPredicted RBP30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms