RNA–Protein interactions for RNA: ENST00000617201.4

MADCAM1-206, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MADCAM1, Length 1,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-206ENST00000617201 CEP170Q5SW79 1584 aa36.82■■■■□ 3.49
MADCAM1-206ENST00000617201 NUP160Q12769 1436 aa36.81■■■■□ 3.48
MADCAM1-206ENST00000617201 KIAA0586Q9BVV6 1533 aa36.73■■■■□ 3.47
MADCAM1-206ENST00000617201 CEP162Q5TB80 1403 aa36.72■■■■□ 3.47
MADCAM1-206ENST00000617201 RANGAP1P46060 587 aaPredicted RBP36.7■■■■□ 3.47
MADCAM1-206ENST00000617201 IQGAP2Q13576 1575 aa36.69■■■■□ 3.46
MADCAM1-206ENST00000617201 CLIP1P30622 1438 aa36.62■■■■□ 3.45
MADCAM1-206ENST00000617201 OSCARQ8IYS5 282 aa36.55■■■■□ 3.44
MADCAM1-206ENST00000617201 CLASP1Q7Z460 1538 aa36.54■■■■□ 3.44
MADCAM1-206ENST00000617201 UGGT2Q9NYU1 1516 aa36.52■■■■□ 3.44
MADCAM1-206ENST00000617201 JPH4Q96JJ6 628 aa36.5■■■■□ 3.43
MADCAM1-206ENST00000617201 ARHGAP35Q9NRY4 1499 aa36.49■■■■□ 3.43
MADCAM1-206ENST00000617201 EFCAB5A4FU69 1503 aa36.47■■■■□ 3.43
MADCAM1-206ENST00000617201 SAMD9Q5K651 1589 aa36.44■■■■□ 3.42
MADCAM1-206ENST00000617201 SHROOM2Q13796 1616 aa36.4■■■■□ 3.42
MADCAM1-206ENST00000617201 P3H3Q8IVL6 736 aa36.39■■■■□ 3.42
MADCAM1-206ENST00000617201 DISP1Q96F81 1524 aa36.37■■■■□ 3.41
MADCAM1-206ENST00000617201 ARAP1Q96P48 1450 aa36.36■■■■□ 3.41
MADCAM1-206ENST00000617201 KIAA0556O60303 1618 aa36.33■■■■□ 3.41
MADCAM1-206ENST00000617201 PRG4Q92954 1404 aaPredicted RBP36.33■■■■□ 3.41
MADCAM1-206ENST00000617201 FHOD3Q2V2M9 1422 aa36.32■■■■□ 3.4
MADCAM1-206ENST00000617201 CARMIL2Q6F5E8 1435 aa36.31■■■■□ 3.4
MADCAM1-206ENST00000617201 VPS8Q8N3P4 1428 aa36.2■■■■□ 3.38
MADCAM1-206ENST00000617201 ERCC6L2Q5T890 1561 aa36.18■■■■□ 3.38
MADCAM1-206ENST00000617201 FMN1Q68DA7 1419 aa36.13■■■■□ 3.37
MADCAM1-206ENST00000617201 TTBK1Q5TCY1 1321 aaPredicted RBP36.1■■■■□ 3.37
MADCAM1-206ENST00000617201 PTPRGP23470 1445 aa36.03■■■■□ 3.36
MADCAM1-206ENST00000617201 PCF11O94913 1555 aaKnown RBP35.99■■■■□ 3.35
MADCAM1-206ENST00000617201 CASKIN1Q8WXD9 1431 aa35.97■■■■□ 3.35
MADCAM1-206ENST00000617201 FYCO1Q9BQS8 1478 aa35.93■■■■□ 3.34
MADCAM1-206ENST00000617201 ARHGEF11O15085 1522 aa35.93■■■■□ 3.34
MADCAM1-206ENST00000617201 ATP1B4Q9UN42 357 aaPredicted RBP35.91■■■■□ 3.34
MADCAM1-206ENST00000617201 PLB1Q6P1J6 1458 aa35.9■■■■□ 3.34
MADCAM1-206ENST00000617201 RAPGEF6Q8TEU7 1601 aa35.89■■■■□ 3.34
MADCAM1-206ENST00000617201 ABCA8O94911 1581 aa35.86■■■■□ 3.33
MADCAM1-206ENST00000617201 HECW1Q76N89 1606 aa35.84■■■■□ 3.33
MADCAM1-206ENST00000617201 RIMBP3CA6NJZ7 1639 aa35.82■■■■□ 3.33
MADCAM1-206ENST00000617201 RIMBP3BA6NNM3 1639 aa35.82■■■■□ 3.33
MADCAM1-206ENST00000617201 RIMBP3Q9UFD9 1639 aa35.82■■■■□ 3.33
MADCAM1-206ENST00000617201 APLP2Q06481 763 aa35.82■■■■□ 3.32
MADCAM1-206ENST00000617201 UACAQ9BZF9 1416 aa35.82■■■■□ 3.32
MADCAM1-206ENST00000617201 NUP153P49790 1475 aaKnown RBP35.77■■■■□ 3.32
MADCAM1-206ENST00000617201 LRRIQ1Q96JM4 1722 aa35.73■■■■□ 3.31
MADCAM1-206ENST00000617201 ABCC2Q92887 1545 aa35.72■■■■□ 3.31
MADCAM1-206ENST00000617201 EPRSP07814 1512 aaKnown RBP35.72■■■■□ 3.31
MADCAM1-206ENST00000617201 MAP3K1Q13233 1512 aa35.7■■■■□ 3.31
MADCAM1-206ENST00000617201 CCDC18Q5T9S5 1454 aa35.7■■■■□ 3.31
MADCAM1-206ENST00000617201 ARID3CA6NKF2 412 aa35.7■■■■□ 3.31
MADCAM1-206ENST00000617201 TIAM1Q13009 1591 aa35.69■■■■□ 3.3
MADCAM1-206ENST00000617201 UHRF1BP1LA0JNW5 1464 aa35.69■■■■□ 3.3
MADCAM1-206ENST00000617201 CFAP43Q8NDM7 1665 aa35.67■■■■□ 3.3
MADCAM1-206ENST00000617201 CDK13Q14004 1512 aaKnown RBP35.65■■■■□ 3.3
MADCAM1-206ENST00000617201 DNAJC5Q9H3Z4 198 aa35.63■■■■□ 3.29
MADCAM1-206ENST00000617201 PPARGC1BQ86YN6 1023 aaKnown RBP35.62■■■■□ 3.29
MADCAM1-206ENST00000617201 ADCY10Q96PN6 1610 aa35.61■■■■□ 3.29
MADCAM1-206ENST00000617201 ATP10BO94823 1461 aa35.6■■■■□ 3.29
MADCAM1-206ENST00000617201 CYB5RLQ6IPT4 315 aa35.6■■■■□ 3.29
MADCAM1-206ENST00000617201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.59■■■■□ 3.29
MADCAM1-206ENST00000617201 HNRNPUL2Q1KMD3 747 aaKnown RBP35.59■■■■□ 3.29
MADCAM1-206ENST00000617201 KANK4Q5T7N3 995 aaPredicted RBP35.57■■■■□ 3.28
MADCAM1-206ENST00000617201 LRRC9Q6ZRR7 1453 aa35.54■■■■□ 3.28
MADCAM1-206ENST00000617201 KDM5BQ9UGL1 1544 aa35.52■■■■□ 3.28
MADCAM1-206ENST00000617201 CDK11AQ9UQ88 783 aaPredicted RBP35.48■■■■□ 3.27
MADCAM1-206ENST00000617201 ZCCHC11Q5TAX3 1644 aaKnown RBP35.48■■■■□ 3.27
MADCAM1-206ENST00000617201 MTUS2Q5JR59 1369 aa35.48■■■■□ 3.27
MADCAM1-206ENST00000617201 MAGI3Q5TCQ9 1506 aa35.46■■■■□ 3.27
MADCAM1-206ENST00000617201 EHBP1L1Q8N3D4 1523 aa35.43■■■■□ 3.26
MADCAM1-206ENST00000617201 PLEKHD1A6NEE1 506 aa35.41■■■■□ 3.26
MADCAM1-206ENST00000617201 NPM1P06748 294 aaKnown RBP eCLIP35.4■■■■□ 3.26
MADCAM1-206ENST00000617201 TROQ12816 1431 aaPredicted RBP35.37■■■■□ 3.25
MADCAM1-206ENST00000617201 SUPT6HQ7KZ85 1726 aaKnown RBP35.29■■■■□ 3.24
MADCAM1-206ENST00000617201 NCOA2Q15596 1464 aa35.24■■■■□ 3.23
MADCAM1-206ENST00000617201 ASXL2Q76L83 1435 aa35.23■■■■□ 3.23
MADCAM1-206ENST00000617201 WDR7Q9Y4E6 1490 aa35.22■■■■□ 3.23
MADCAM1-206ENST00000617201 KIF14Q15058 1648 aa35.21■■■■□ 3.23
MADCAM1-206ENST00000617201 KCNH8Q96L42 1107 aa35.16■■■■□ 3.22
MADCAM1-206ENST00000617201 PHLDB1Q86UU1 1377 aa35.16■■■■□ 3.22
MADCAM1-206ENST00000617201 MAPKBP1O60336 1514 aa35.15■■■■□ 3.22
MADCAM1-206ENST00000617201 ABCC10Q5T3U5 1492 aa35.1■■■■□ 3.21
MADCAM1-206ENST00000617201 CCNB3Q8WWL7 1395 aa35.07■■■■□ 3.2
MADCAM1-206ENST00000617201 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.06■■■■□ 3.2
MADCAM1-206ENST00000617201 MYOM3Q5VTT5 1437 aa35.05■■■■□ 3.2
MADCAM1-206ENST00000617201 TRIM26Q12899 539 aaPredicted RBP35.03■■■■□ 3.2
MADCAM1-206ENST00000617201 TTC37Q6PGP7 1564 aa35.02■■■■□ 3.2
MADCAM1-206ENST00000617201 GPATCH8Q9UKJ3 1502 aaKnown RBP34.99■■■■□ 3.19
MADCAM1-206ENST00000617201 RRBP1Q9P2E9 1410 aaKnown RBP34.98■■■■□ 3.19
MADCAM1-206ENST00000617201 FGD6Q6ZV73 1430 aa34.97■■■■□ 3.19
MADCAM1-206ENST00000617201 ITSN2Q9NZM3 1697 aa34.96■■■■□ 3.19
MADCAM1-206ENST00000617201 CDC42BPAQ5VT25 1732 aa34.95■■■■□ 3.19
MADCAM1-206ENST00000617201 ABCA9Q8IUA7 1624 aa34.94■■■■□ 3.18
MADCAM1-206ENST00000617201 MIA2Q96PC5 1412 aa34.93■■■■□ 3.18
MADCAM1-206ENST00000617201 CFDP1Q9UEE9 299 aaPredicted RBP34.9■■■■□ 3.18
MADCAM1-206ENST00000617201 MYO5CQ9NQX4 1742 aa34.89■■■■□ 3.18
MADCAM1-206ENST00000617201 PREX2Q70Z35 1606 aa34.89■■■■□ 3.18
MADCAM1-206ENST00000617201 GLI2P10070 1586 aa34.85■■■■□ 3.17
MADCAM1-206ENST00000617201 DIP2BQ9P265 1576 aa34.85■■■■□ 3.17
MADCAM1-206ENST00000617201 PTPN23Q9H3S7 1636 aa34.85■■■■□ 3.17
MADCAM1-206ENST00000617201 PLCH2O75038 1416 aa34.85■■■■□ 3.17
MADCAM1-206ENST00000617201 CDC42BPBQ9Y5S2 1711 aa34.84■■■■□ 3.17
MADCAM1-206ENST00000617201 FAM50AQ14320 339 aaKnown RBP34.84■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms