RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 IRX6P78412 446 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF11A-206ENST00000617039 TONSLQ96HA7 1378 aa20.9■□□□□ 0.94
TNFRSF11A-206ENST00000617039 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.94
TNFRSF11A-206ENST00000617039 FHOD3Q2V2M9 1422 aa20.88■□□□□ 0.93
TNFRSF11A-206ENST00000617039 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
TNFRSF11A-206ENST00000617039 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
TNFRSF11A-206ENST00000617039 NESP48681 1621 aa20.86■□□□□ 0.93
TNFRSF11A-206ENST00000617039 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
TNFRSF11A-206ENST00000617039 FAM9BQ8IZU0 186 aa20.85■□□□□ 0.93
TNFRSF11A-206ENST00000617039 CCNB3Q8WWL7 1395 aa20.85■□□□□ 0.93
TNFRSF11A-206ENST00000617039 BICRAQ9NZM4 1560 aa20.83■□□□□ 0.92
TNFRSF11A-206ENST00000617039 RGL3Q3MIN7 710 aa20.81■□□□□ 0.92
TNFRSF11A-206ENST00000617039 FKBP8Q14318 412 aa20.76■□□□□ 0.91
TNFRSF11A-206ENST00000617039 IGF1RP08069 1367 aa20.76■□□□□ 0.91
TNFRSF11A-206ENST00000617039 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
TNFRSF11A-206ENST00000617039 CDK11AQ9UQ88 783 aaPredicted RBP20.76■□□□□ 0.91
TNFRSF11A-206ENST00000617039 HNRNPUQ00839 825 aaKnown RBP eCLIP20.75■□□□□ 0.91
TNFRSF11A-206ENST00000617039 RAB3GAP2Q9H2M9 1393 aa20.72■□□□□ 0.91
TNFRSF11A-206ENST00000617039 CHGAP10645 457 aaKnown RBP20.69■□□□□ 0.9
TNFRSF11A-206ENST00000617039 CFDP1Q9UEE9 299 aaPredicted RBP20.69■□□□□ 0.9
TNFRSF11A-206ENST00000617039 FANCD2Q9BXW9 1451 aa20.68■□□□□ 0.9
TNFRSF11A-206ENST00000617039 ERCC6Q03468 1493 aa20.68■□□□□ 0.9
TNFRSF11A-206ENST00000617039 FGD5Q6ZNL6 1462 aa20.66■□□□□ 0.9
TNFRSF11A-206ENST00000617039 ARAP1Q96P48 1450 aa20.63■□□□□ 0.89
TNFRSF11A-206ENST00000617039 TSPY4P0CV99 314 aa20.61■□□□□ 0.89
TNFRSF11A-206ENST00000617039 TSPY10P0CW01 314 aa20.61■□□□□ 0.89
TNFRSF11A-206ENST00000617039 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
TNFRSF11A-206ENST00000617039 PLEKHD1A6NEE1 506 aa20.6■□□□□ 0.89
TNFRSF11A-206ENST00000617039 ZNF644Q9H582 1327 aaPredicted RBP20.59■□□□□ 0.89
TNFRSF11A-206ENST00000617039 ERICH6Q7L0X2 663 aa20.59■□□□□ 0.89
TNFRSF11A-206ENST00000617039 NCAPD3P42695 1498 aa20.58■□□□□ 0.88
TNFRSF11A-206ENST00000617039 DHX57Q6P158 1386 aaKnown RBP20.57■□□□□ 0.88
TNFRSF11A-206ENST00000617039 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.88
TNFRSF11A-206ENST00000617039 KIF21BO75037 1637 aa20.56■□□□□ 0.88
TNFRSF11A-206ENST00000617039 BCL11AQ9H165 835 aa20.56■□□□□ 0.88
TNFRSF11A-206ENST00000617039 PDS5BQ9NTI5 1447 aa20.55■□□□□ 0.88
TNFRSF11A-206ENST00000617039 CUX1P39880 1505 aa20.53■□□□□ 0.88
TNFRSF11A-206ENST00000617039 PHLDB1Q86UU1 1377 aa20.53■□□□□ 0.88
TNFRSF11A-206ENST00000617039 MRS2Q9HD23 443 aa20.52■□□□□ 0.88
TNFRSF11A-206ENST00000617039 SETD5Q9C0A6 1442 aa20.49■□□□□ 0.87
TNFRSF11A-206ENST00000617039 EIF4G2P78344 907 aaKnown RBP eCLIP20.47■□□□□ 0.87
TNFRSF11A-206ENST00000617039 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
TNFRSF11A-206ENST00000617039 HNRNPMP52272 730 aaKnown RBP eCLIP20.45■□□□□ 0.86
TNFRSF11A-206ENST00000617039 CFTRP13569 1480 aa20.44■□□□□ 0.86
TNFRSF11A-206ENST00000617039 ARHGAP35Q9NRY4 1499 aa20.43■□□□□ 0.86
TNFRSF11A-206ENST00000617039 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
TNFRSF11A-206ENST00000617039 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
TNFRSF11A-206ENST00000617039 SUPT16HQ9Y5B9 1047 aaKnown RBP20.4■□□□□ 0.86
TNFRSF11A-206ENST00000617039 L3MBTL2Q969R5 705 aa20.4■□□□□ 0.86
TNFRSF11A-206ENST00000617039 HSPA5P11021 654 aaKnown RBP20.39■□□□□ 0.86
TNFRSF11A-206ENST00000617039 MPHOSPH9Q99550 1183 aa20.39■□□□□ 0.86
TNFRSF11A-206ENST00000617039 DCAF11Q8TEB1 546 aa20.38■□□□□ 0.85
TNFRSF11A-206ENST00000617039 PKD2Q13563 968 aa20.38■□□□□ 0.85
TNFRSF11A-206ENST00000617039 PPP1R15AO75807 674 aaPredicted RBP20.38■□□□□ 0.85
TNFRSF11A-206ENST00000617039 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
TNFRSF11A-206ENST00000617039 TMC1Q8TDI8 760 aa20.34■□□□□ 0.85
TNFRSF11A-206ENST00000617039 CARD11Q9BXL7 1154 aa20.33■□□□□ 0.84
TNFRSF11A-206ENST00000617039 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
TNFRSF11A-206ENST00000617039 PLEKHG5O94827 1062 aa20.3■□□□□ 0.84
TNFRSF11A-206ENST00000617039 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
TNFRSF11A-206ENST00000617039 NPM1P06748 294 aaKnown RBP eCLIP20.27■□□□□ 0.84
TNFRSF11A-206ENST00000617039 TOP2BQ02880 1626 aa20.26■□□□□ 0.83
TNFRSF11A-206ENST00000617039 FMN1Q68DA7 1419 aa20.25■□□□□ 0.83
TNFRSF11A-206ENST00000617039 TNNT2P45379 298 aaPredicted RBP20.24■□□□□ 0.83
TNFRSF11A-206ENST00000617039 CC2D1BQ5T0F9 858 aaKnown RBP20.24■□□□□ 0.83
TNFRSF11A-206ENST00000617039 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
TNFRSF11A-206ENST00000617039 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
TNFRSF11A-206ENST00000617039 SAFB2Q14151 953 aaKnown RBP eCLIP20.2■□□□□ 0.82
TNFRSF11A-206ENST00000617039 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.82
TNFRSF11A-206ENST00000617039 TOPBP1Q92547 1522 aa20.19■□□□□ 0.82
TNFRSF11A-206ENST00000617039 NUP155O75694 1391 aa20.18■□□□□ 0.82
TNFRSF11A-206ENST00000617039 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
TNFRSF11A-206ENST00000617039 GGT6Q6P531 493 aa20.15■□□□□ 0.82
TNFRSF11A-206ENST00000617039 MLECQ14165 292 aa20.15■□□□□ 0.82
TNFRSF11A-206ENST00000617039 B4GALNT3Q6L9W6 998 aa20.14■□□□□ 0.81
TNFRSF11A-206ENST00000617039 STAG3Q9UJ98 1225 aa20.14■□□□□ 0.81
TNFRSF11A-206ENST00000617039 NEUROD2Q15784 382 aa20.12■□□□□ 0.81
TNFRSF11A-206ENST00000617039 FGD6Q6ZV73 1430 aa20.07■□□□□ 0.8
TNFRSF11A-206ENST00000617039 SLC24A1O60721 1099 aa20.07■□□□□ 0.8
TNFRSF11A-206ENST00000617039 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
TNFRSF11A-206ENST00000617039 CCDC184Q52MB2 194 aa20.06■□□□□ 0.8
TNFRSF11A-206ENST00000617039 CCDC18Q5T9S5 1454 aa20.05■□□□□ 0.8
TNFRSF11A-206ENST00000617039 ST20-MTHFSA0A0A6YYL1 179 aa20.04■□□□□ 0.8
TNFRSF11A-206ENST00000617039 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.8
TNFRSF11A-206ENST00000617039 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.79
TNFRSF11A-206ENST00000617039 NCOA2Q15596 1464 aa20.01■□□□□ 0.79
TNFRSF11A-206ENST00000617039 PRG4Q92954 1404 aaPredicted RBP20■□□□□ 0.79
TNFRSF11A-206ENST00000617039 NBPF8Q3BBV2 869 aa20■□□□□ 0.79
TNFRSF11A-206ENST00000617039 KIF3BO15066 747 aa20■□□□□ 0.79
TNFRSF11A-206ENST00000617039 PEG3Q9GZU2 1588 aa19.99■□□□□ 0.79
TNFRSF11A-206ENST00000617039 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
TNFRSF11A-206ENST00000617039 CDK13Q14004 1512 aaKnown RBP19.98■□□□□ 0.79
TNFRSF11A-206ENST00000617039 RRBP1Q9P2E9 1410 aaKnown RBP19.98■□□□□ 0.79
TNFRSF11A-206ENST00000617039 ERICH3Q5RHP9 1530 aa19.98■□□□□ 0.79
TNFRSF11A-206ENST00000617039 CANXP27824 592 aaKnown RBP19.97■□□□□ 0.79
TNFRSF11A-206ENST00000617039 PPM1GO15355 546 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF11A-206ENST00000617039 AFAP1Q8N556 730 aa19.97■□□□□ 0.79
TNFRSF11A-206ENST00000617039 STK26Q9P289 416 aa19.97■□□□□ 0.79
TNFRSF11A-206ENST00000617039 CARMIL2Q6F5E8 1435 aa19.96■□□□□ 0.79
TNFRSF11A-206ENST00000617039 C11orf95C9JLR9 678 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms