RNA–Protein interactions for RNA: ENST00000616646.4

DDX52-212, Transcript of DExD-box helicase 52, humanhuman

TSL 5

Gene DDX52, Length 2,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52-212ENST00000616646 NACADO15069 1562 aa11.95□□□□□ -0.5
DDX52-212ENST00000616646 TOP2AP11388 1531 aaKnown RBP11.94□□□□□ -0.5
DDX52-212ENST00000616646 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
DDX52-212ENST00000616646 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
DDX52-212ENST00000616646 CNGB1Q14028 1251 aaPredicted RBP11.91□□□□□ -0.5
DDX52-212ENST00000616646 CEP164Q9UPV0 1460 aa11.91□□□□□ -0.5
DDX52-212ENST00000616646 SENP3-EIF4A1A0A087X0R7 540 aa11.91□□□□□ -0.5
DDX52-212ENST00000616646 NEFLP07196 543 aa11.9□□□□□ -0.5
DDX52-212ENST00000616646 EEA1Q15075 1411 aa11.9□□□□□ -0.5
DDX52-212ENST00000616646 MSH5O43196 834 aa11.9□□□□□ -0.5
DDX52-212ENST00000616646 SYNJ1O43426 1573 aa11.88□□□□□ -0.51
DDX52-212ENST00000616646 KIF21BO75037 1637 aa11.87□□□□□ -0.51
DDX52-212ENST00000616646 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
DDX52-212ENST00000616646 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
DDX52-212ENST00000616646 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
DDX52-212ENST00000616646 CLSPNQ9HAW4 1339 aa11.81□□□□□ -0.52
DDX52-212ENST00000616646 HNRNPUQ00839 825 aaKnown RBP eCLIP11.8□□□□□ -0.52
DDX52-212ENST00000616646 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
DDX52-212ENST00000616646 ARAP1Q96P48 1450 aa11.79□□□□□ -0.52
DDX52-212ENST00000616646 ANP32CO43423 234 aa11.79□□□□□ -0.52
DDX52-212ENST00000616646 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
DDX52-212ENST00000616646 PPP1R15AO75807 674 aaPredicted RBP11.77□□□□□ -0.53
DDX52-212ENST00000616646 FBLN2P98095 1184 aa11.77□□□□□ -0.53
DDX52-212ENST00000616646 BAZ1BQ9UIG0 1483 aaKnown RBP11.75□□□□□ -0.53
DDX52-212ENST00000616646 WDR97A6NE52 1622 aa11.74□□□□□ -0.53
DDX52-212ENST00000616646 NBR1Q14596 966 aa11.73□□□□□ -0.53
DDX52-212ENST00000616646 TMEM132AQ24JP5 1023 aa11.73□□□□□ -0.53
DDX52-212ENST00000616646 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
DDX52-212ENST00000616646 CCDC184Q52MB2 194 aa11.72□□□□□ -0.53
DDX52-212ENST00000616646 B4GALNT3Q6L9W6 998 aa11.72□□□□□ -0.53
DDX52-212ENST00000616646 NPM2Q86SE8 214 aaKnown RBP11.71□□□□□ -0.54
DDX52-212ENST00000616646 FAM9BQ8IZU0 186 aa11.7□□□□□ -0.54
DDX52-212ENST00000616646 CDK11AQ9UQ88 783 aaPredicted RBP11.69□□□□□ -0.54
DDX52-212ENST00000616646 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
DDX52-212ENST00000616646 MAPKBP1O60336 1514 aa11.68□□□□□ -0.54
DDX52-212ENST00000616646 PHLDB1Q86UU1 1377 aa11.67□□□□□ -0.54
DDX52-212ENST00000616646 RRBP1Q9P2E9 1410 aaKnown RBP11.66□□□□□ -0.54
DDX52-212ENST00000616646 ARID3CA6NKF2 412 aa11.65□□□□□ -0.54
DDX52-212ENST00000616646 SETD5Q9C0A6 1442 aa11.65□□□□□ -0.55
DDX52-212ENST00000616646 EIF5BO60841 1220 aaKnown RBP11.64□□□□□ -0.55
DDX52-212ENST00000616646 POLR3GLQ9BT43 218 aa11.64□□□□□ -0.55
DDX52-212ENST00000616646 VSIG10Q8N0Z9 540 aa11.64□□□□□ -0.55
DDX52-212ENST00000616646 CHIC2Q9UKJ5 165 aa11.64□□□□□ -0.55
DDX52-212ENST00000616646 DNAJC5Q9H3Z4 198 aa11.63□□□□□ -0.55
DDX52-212ENST00000616646 ARHGAP35Q9NRY4 1499 aa11.63□□□□□ -0.55
DDX52-212ENST00000616646 FOXD1Q16676 465 aa11.62□□□□□ -0.55
DDX52-212ENST00000616646 DEKP35659 375 aaKnown RBP11.61□□□□□ -0.55
DDX52-212ENST00000616646 PAK3O75914 559 aaPredicted RBP11.61□□□□□ -0.55
DDX52-212ENST00000616646 TONSLQ96HA7 1378 aa11.61□□□□□ -0.55
DDX52-212ENST00000616646 PRXQ9BXM0 1461 aa11.6□□□□□ -0.55
DDX52-212ENST00000616646 ATAD2BQ9ULI0 1458 aa11.6□□□□□ -0.55
DDX52-212ENST00000616646 CCER2I3L3R5 266 aa11.59□□□□□ -0.55
DDX52-212ENST00000616646 RRP7BPQ9NSQ0 103 aa11.59□□□□□ -0.55
DDX52-212ENST00000616646 HSPA5P11021 654 aaKnown RBP11.56□□□□□ -0.56
DDX52-212ENST00000616646 C11orf95C9JLR9 678 aaPredicted RBP11.55□□□□□ -0.56
DDX52-212ENST00000616646 KIF27Q86VH2 1401 aa11.55□□□□□ -0.56
DDX52-212ENST00000616646 MRS2Q9HD23 443 aa11.55□□□□□ -0.56
DDX52-212ENST00000616646 WASHC2AQ641Q2 1341 aa11.54□□□□□ -0.56
DDX52-212ENST00000616646 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
DDX52-212ENST00000616646 UNC13AQ9UPW8 1703 aa11.53□□□□□ -0.56
DDX52-212ENST00000616646 SALL2Q9Y467 1007 aaPredicted RBP11.52□□□□□ -0.56
DDX52-212ENST00000616646 ANO8Q9HCE9 1232 aaPredicted RBP11.52□□□□□ -0.57
DDX52-212ENST00000616646 FANCIQ9NVI1 1328 aa11.51□□□□□ -0.57
DDX52-212ENST00000616646 FHOD3Q2V2M9 1422 aa11.51□□□□□ -0.57
DDX52-212ENST00000616646 CUX2O14529 1486 aa11.51□□□□□ -0.57
DDX52-212ENST00000616646 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
DDX52-212ENST00000616646 PPP4R2Q9NY27 417 aa11.5□□□□□ -0.57
DDX52-212ENST00000616646 CUX1P39880 1505 aa11.49□□□□□ -0.57
DDX52-212ENST00000616646 CCDC136Q96JN2 1154 aa11.49□□□□□ -0.57
DDX52-212ENST00000616646 IGF1RP08069 1367 aa11.49□□□□□ -0.57
DDX52-212ENST00000616646 BICRAQ9NZM4 1560 aa11.49□□□□□ -0.57
DDX52-212ENST00000616646 TOP2BQ02880 1626 aa11.49□□□□□ -0.57
DDX52-212ENST00000616646 LRRC9Q6ZRR7 1453 aa11.48□□□□□ -0.57
DDX52-212ENST00000616646 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
DDX52-212ENST00000616646 NOP58Q9Y2X3 529 aaKnown RBP11.46□□□□□ -0.57
DDX52-212ENST00000616646 AQRO60306 1485 aaKnown RBP eCLIP11.46□□□□□ -0.57
DDX52-212ENST00000616646 SKAP1Q86WV1 359 aa11.46□□□□□ -0.58
DDX52-212ENST00000616646 PTPRKQ15262 1439 aa11.45□□□□□ -0.58
DDX52-212ENST00000616646 IL27Q8NEV9 243 aa11.45□□□□□ -0.58
DDX52-212ENST00000616646 LAS1LQ9Y4W2 734 aaKnown RBP11.45□□□□□ -0.58
DDX52-212ENST00000616646 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
DDX52-212ENST00000616646 ERICH3Q5RHP9 1530 aa11.44□□□□□ -0.58
DDX52-212ENST00000616646 L3MBTL2Q969R5 705 aa11.43□□□□□ -0.58
DDX52-212ENST00000616646 AKNAQ7Z591 1439 aa11.43□□□□□ -0.58
DDX52-212ENST00000616646 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.43□□□□□ -0.58
DDX52-212ENST00000616646 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDX52-212ENST00000616646 PRKRIP1Q9H875 184 aaPredicted RBP11.42□□□□□ -0.58
DDX52-212ENST00000616646 TIAM1Q13009 1591 aa11.42□□□□□ -0.58
DDX52-212ENST00000616646 MTUS2Q5JR59 1369 aa11.4□□□□□ -0.58
DDX52-212ENST00000616646 CCDC18Q5T9S5 1454 aa11.39□□□□□ -0.59
DDX52-212ENST00000616646 NBPF8Q3BBV2 869 aa11.39□□□□□ -0.59
DDX52-212ENST00000616646 FOXD4L1Q9NU39 408 aa11.39□□□□□ -0.59
DDX52-212ENST00000616646 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
DDX52-212ENST00000616646 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
DDX52-212ENST00000616646 ANP32AP39687 249 aaKnown RBP11.35□□□□□ -0.59
DDX52-212ENST00000616646 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
DDX52-212ENST00000616646 PEG3Q9GZU2 1588 aa11.34□□□□□ -0.59
DDX52-212ENST00000616646 PCF11O94913 1555 aaKnown RBP11.34□□□□□ -0.59
DDX52-212ENST00000616646 MPHOSPH9Q99550 1183 aa11.33□□□□□ -0.6
DDX52-212ENST00000616646 FGD6Q6ZV73 1430 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms