RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 FKBP8Q14318 412 aa7.83□□□□□ -1.16
SYNCRIP-204ENST00000616122 NCAPD3P42695 1498 aa7.83□□□□□ -1.16
SYNCRIP-204ENST00000616122 MYT1LQ9UL68 1186 aa7.83□□□□□ -1.16
SYNCRIP-204ENST00000616122 DHX57Q6P158 1386 aaKnown RBP7.82□□□□□ -1.16
SYNCRIP-204ENST00000616122 RAB3GAP2Q9H2M9 1393 aa7.82□□□□□ -1.16
SYNCRIP-204ENST00000616122 CHMP7Q8WUX9 453 aaPredicted RBP7.81□□□□□ -1.16
SYNCRIP-204ENST00000616122 EIF4G2P78344 907 aaKnown RBP eCLIP7.81□□□□□ -1.16
SYNCRIP-204ENST00000616122 SLC4A1APQ9BWU0 796 aaKnown RBP7.81□□□□□ -1.16
SYNCRIP-204ENST00000616122 PPP1R15AO75807 674 aaPredicted RBP7.81□□□□□ -1.16
SYNCRIP-204ENST00000616122 TSPY4P0CV99 314 aa7.8□□□□□ -1.16
SYNCRIP-204ENST00000616122 TSPY10P0CW01 314 aa7.8□□□□□ -1.16
SYNCRIP-204ENST00000616122 SETD5Q9C0A6 1442 aa7.78□□□□□ -1.16
SYNCRIP-204ENST00000616122 CFDP1Q9UEE9 299 aaPredicted RBP7.78□□□□□ -1.16
SYNCRIP-204ENST00000616122 PRXQ9BXM0 1461 aa7.77□□□□□ -1.17
SYNCRIP-204ENST00000616122 FAM9BQ8IZU0 186 aa7.77□□□□□ -1.17
SYNCRIP-204ENST00000616122 MRS2Q9HD23 443 aa7.77□□□□□ -1.17
SYNCRIP-204ENST00000616122 PLEKHD1A6NEE1 506 aa7.76□□□□□ -1.17
SYNCRIP-204ENST00000616122 FHOD3Q2V2M9 1422 aa7.76□□□□□ -1.17
SYNCRIP-204ENST00000616122 ARAP1Q96P48 1450 aa7.75□□□□□ -1.17
SYNCRIP-204ENST00000616122 FMN1Q68DA7 1419 aa7.74□□□□□ -1.17
SYNCRIP-204ENST00000616122 CFTRP13569 1480 aa7.74□□□□□ -1.17
SYNCRIP-204ENST00000616122 SUPT16HQ9Y5B9 1047 aaKnown RBP7.73□□□□□ -1.17
SYNCRIP-204ENST00000616122 KDM2AQ9Y2K7 1162 aa7.72□□□□□ -1.17
SYNCRIP-204ENST00000616122 KIF21BO75037 1637 aa7.72□□□□□ -1.17
SYNCRIP-204ENST00000616122 KCNH8Q96L42 1107 aa7.72□□□□□ -1.17
SYNCRIP-204ENST00000616122 PHLDB1Q86UU1 1377 aa7.71□□□□□ -1.17
SYNCRIP-204ENST00000616122 PDS5BQ9NTI5 1447 aa7.71□□□□□ -1.17
SYNCRIP-204ENST00000616122 SYNJ1O43426 1573 aa7.71□□□□□ -1.17
SYNCRIP-204ENST00000616122 TMC1Q8TDI8 760 aa7.7□□□□□ -1.18
SYNCRIP-204ENST00000616122 L3MBTL2Q969R5 705 aa7.7□□□□□ -1.18
SYNCRIP-204ENST00000616122 FOXD1Q16676 465 aa7.7□□□□□ -1.18
SYNCRIP-204ENST00000616122 IRX6P78412 446 aaPredicted RBP7.7□□□□□ -1.18
SYNCRIP-204ENST00000616122 CCER2I3L3R5 266 aa7.7□□□□□ -1.18
SYNCRIP-204ENST00000616122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.69□□□□□ -1.187e-8■■□□□ 12.4
SYNCRIP-204ENST00000616122 FANCD2Q9BXW9 1451 aa7.69□□□□□ -1.18
SYNCRIP-204ENST00000616122 ARHGAP35Q9NRY4 1499 aa7.69□□□□□ -1.18
SYNCRIP-204ENST00000616122 FGD5Q6ZNL6 1462 aa7.68□□□□□ -1.18
SYNCRIP-204ENST00000616122 BICRAQ9NZM4 1560 aa7.68□□□□□ -1.18
SYNCRIP-204ENST00000616122 MPHOSPH9Q99550 1183 aa7.68□□□□□ -1.18
SYNCRIP-204ENST00000616122 RGL3Q3MIN7 710 aa7.68□□□□□ -1.18
SYNCRIP-204ENST00000616122 DNAJC5BQ9UF47 199 aa7.68□□□□□ -1.18
SYNCRIP-204ENST00000616122 HSPA5P11021 654 aaKnown RBP7.67□□□□□ -1.18
SYNCRIP-204ENST00000616122 SALL2Q9Y467 1007 aaPredicted RBP7.67□□□□□ -1.18
SYNCRIP-204ENST00000616122 RAD54L2Q9Y4B4 1467 aa7.66□□□□□ -1.18
SYNCRIP-204ENST00000616122 SENP3-EIF4A1A0A087X0R7 540 aa7.66□□□□□ -1.18
SYNCRIP-204ENST00000616122 EIF4G1Q04637 1599 aaKnown RBP7.66□□□□□ -1.18
SYNCRIP-204ENST00000616122 RRBP1Q9P2E9 1410 aaKnown RBP7.65□□□□□ -1.18
SYNCRIP-204ENST00000616122 PKD2Q13563 968 aa7.65□□□□□ -1.19
SYNCRIP-204ENST00000616122 CARD11Q9BXL7 1154 aa7.64□□□□□ -1.19
SYNCRIP-204ENST00000616122 JPH4Q96JJ6 628 aa7.64□□□□□ -1.19
SYNCRIP-204ENST00000616122 ERICH3Q5RHP9 1530 aa7.63□□□□□ -1.19
SYNCRIP-204ENST00000616122 CCDC136Q96JN2 1154 aa7.62□□□□□ -1.19
SYNCRIP-204ENST00000616122 LRRC9Q6ZRR7 1453 aa7.61□□□□□ -1.19
SYNCRIP-204ENST00000616122 CUX1P39880 1505 aa7.61□□□□□ -1.19
SYNCRIP-204ENST00000616122 FGD6Q6ZV73 1430 aa7.61□□□□□ -1.19
SYNCRIP-204ENST00000616122 DCAF11Q8TEB1 546 aa7.61□□□□□ -1.19
SYNCRIP-204ENST00000616122 ZNF644Q9H582 1327 aaPredicted RBP7.6□□□□□ -1.19
SYNCRIP-204ENST00000616122 PEG3Q9GZU2 1588 aa7.6□□□□□ -1.19
SYNCRIP-204ENST00000616122 NUP155O75694 1391 aa7.59□□□□□ -1.19
SYNCRIP-204ENST00000616122 PRKRIP1Q9H875 184 aaPredicted RBP7.59□□□□□ -1.19
SYNCRIP-204ENST00000616122 DAXXQ9UER7 740 aaPredicted RBP7.59□□□□□ -1.19
SYNCRIP-204ENST00000616122 HMGXB3Q12766 1538 aa7.59□□□□□ -1.19
SYNCRIP-204ENST00000616122 TOP2BQ02880 1626 aa7.59□□□□□ -1.19
SYNCRIP-204ENST00000616122 CHGAP10645 457 aaKnown RBP7.59□□□□□ -1.2
SYNCRIP-204ENST00000616122 GAPVD1Q14C86 1478 aa7.58□□□□□ -1.2
SYNCRIP-204ENST00000616122 TSHZ2Q9NRE2 1034 aa7.58□□□□□ -1.2
SYNCRIP-204ENST00000616122 NESP48681 1621 aa7.57□□□□□ -1.2
SYNCRIP-204ENST00000616122 MYOM3Q5VTT5 1437 aa7.57□□□□□ -1.2
SYNCRIP-204ENST00000616122 CASKIN1Q8WXD9 1431 aa7.57□□□□□ -1.2
SYNCRIP-204ENST00000616122 POLA1P09884 1462 aaPredicted RBP7.57□□□□□ -1.2
SYNCRIP-204ENST00000616122 NPM1P06748 294 aaKnown RBP eCLIP7.57□□□□□ -1.2
SYNCRIP-204ENST00000616122 RTL5Q5HYW3 569 aaPredicted RBP7.57□□□□□ -1.2
SYNCRIP-204ENST00000616122 UACAQ9BZF9 1416 aa7.56□□□□□ -1.2
SYNCRIP-204ENST00000616122 B4GALNT3Q6L9W6 998 aa7.56□□□□□ -1.2
SYNCRIP-204ENST00000616122 PPP4R2Q9NY27 417 aa7.56□□□□□ -1.2
SYNCRIP-204ENST00000616122 CCDC18Q5T9S5 1454 aa7.56□□□□□ -1.2
SYNCRIP-204ENST00000616122 CARMIL2Q6F5E8 1435 aa7.56□□□□□ -1.2
SYNCRIP-204ENST00000616122 AQRO60306 1485 aaKnown RBP eCLIP7.55□□□□□ -1.21e-6■■■□□ 16.7
SYNCRIP-204ENST00000616122 ANKRD30AQ9BXX3 1397 aa7.55□□□□□ -1.2
SYNCRIP-204ENST00000616122 ERCC6Q03468 1493 aa7.54□□□□□ -1.2
SYNCRIP-204ENST00000616122 RBM19Q9Y4C8 960 aaKnown RBP7.54□□□□□ -1.2
SYNCRIP-204ENST00000616122 ST20-MTHFSA0A0A6YYL1 179 aa7.54□□□□□ -1.2
SYNCRIP-204ENST00000616122 ANP32AP39687 249 aaKnown RBP7.54□□□□□ -1.2
SYNCRIP-204ENST00000616122 HNRNPMP52272 730 aaKnown RBP eCLIP7.53□□□□□ -1.29e-7■■■■□ 22.9
SYNCRIP-204ENST00000616122 TOPBP1Q92547 1522 aa7.53□□□□□ -1.2
SYNCRIP-204ENST00000616122 HFM1A2PYH4 1435 aa7.53□□□□□ -1.2
SYNCRIP-204ENST00000616122 WASHC2AQ641Q2 1341 aa7.53□□□□□ -1.2
SYNCRIP-204ENST00000616122 EFCAB2Q5VUJ9 269 aa7.52□□□□□ -1.2
SYNCRIP-204ENST00000616122 NCOA2Q15596 1464 aa7.52□□□□□ -1.21
SYNCRIP-204ENST00000616122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.52□□□□□ -1.212e-8■■■□□ 16.7
SYNCRIP-204ENST00000616122 RSPH4AQ5TD94 716 aa7.52□□□□□ -1.21
SYNCRIP-204ENST00000616122 NPM2Q86SE8 214 aaKnown RBP7.51□□□□□ -1.21
SYNCRIP-204ENST00000616122 NBPF8Q3BBV2 869 aa7.51□□□□□ -1.21
SYNCRIP-204ENST00000616122 KNSTRNQ9Y448 316 aa7.51□□□□□ -1.21
SYNCRIP-204ENST00000616122 ANP32EQ9BTT0 268 aa7.51□□□□□ -1.21
SYNCRIP-204ENST00000616122 NAIPQ13075 1403 aa7.51□□□□□ -1.21
SYNCRIP-204ENST00000616122 WDR43Q15061 677 aaKnown RBP eCLIP7.51□□□□□ -1.21
SYNCRIP-204ENST00000616122 ERICH6BQ5W0A0 696 aa7.51□□□□□ -1.21
SYNCRIP-204ENST00000616122 CDCA8Q53HL2 280 aa7.5□□□□□ -1.21
SYNCRIP-204ENST00000616122 ABCA10Q8WWZ4 1543 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms