RNA–Protein interactions for RNA: ENST00000615982.4

JRK-211, Transcript of Jrk helix-turn-helix protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene JRK, Length 2,823 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-211ENST00000615982 KANK4Q5T7N3 995 aaPredicted RBP23.57■■□□□ 1.36
JRK-211ENST00000615982 NBR1Q14596 966 aa23.53■■□□□ 1.36
JRK-211ENST00000615982 TRIM52Q96A61 297 aa23.53■■□□□ 1.36
JRK-211ENST00000615982 LAMC3Q9Y6N6 1575 aa23.49■■□□□ 1.35
JRK-211ENST00000615982 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.49■■□□□ 1.35
JRK-211ENST00000615982 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
JRK-211ENST00000615982 FANCD2Q9BXW9 1451 aa23.48■■□□□ 1.35
JRK-211ENST00000615982 KIF27Q86VH2 1401 aa23.47■■□□□ 1.35
JRK-211ENST00000615982 PRXQ9BXM0 1461 aa23.46■■□□□ 1.35
JRK-211ENST00000615982 RTN4Q9NQC3 1192 aaKnown RBP23.46■■□□□ 1.35
JRK-211ENST00000615982 IRX6P78412 446 aaPredicted RBP23.43■■□□□ 1.34
JRK-211ENST00000615982 DHX57Q6P158 1386 aaKnown RBP23.43■■□□□ 1.34
JRK-211ENST00000615982 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
JRK-211ENST00000615982 IL27Q8NEV9 243 aa23.41■■□□□ 1.34
JRK-211ENST00000615982 ERICH6BQ5W0A0 696 aa23.41■■□□□ 1.34
JRK-211ENST00000615982 ERICH3Q5RHP9 1530 aa23.4■■□□□ 1.34
JRK-211ENST00000615982 UBE2Q2Q8WVN8 375 aa23.4■■□□□ 1.34
JRK-211ENST00000615982 NESP48681 1621 aa23.39■■□□□ 1.33
JRK-211ENST00000615982 ATP1B4Q9UN42 357 aaPredicted RBP23.38■■□□□ 1.33
JRK-211ENST00000615982 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
JRK-211ENST00000615982 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
JRK-211ENST00000615982 FGD5Q6ZNL6 1462 aa23.35■■□□□ 1.33
JRK-211ENST00000615982 P3H3Q8IVL6 736 aa23.33■■□□□ 1.33
JRK-211ENST00000615982 CUX2O14529 1486 aa23.31■■□□□ 1.32
JRK-211ENST00000615982 PAK3O75914 559 aaPredicted RBP23.3■■□□□ 1.32
JRK-211ENST00000615982 TOPBP1Q92547 1522 aa23.28■■□□□ 1.32
JRK-211ENST00000615982 NOP58Q9Y2X3 529 aaKnown RBP23.27■■□□□ 1.32
JRK-211ENST00000615982 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
JRK-211ENST00000615982 ARHGAP35Q9NRY4 1499 aa23.25■■□□□ 1.31
JRK-211ENST00000615982 DNAJC5BQ9UF47 199 aa23.21■■□□□ 1.31
JRK-211ENST00000615982 IGF1RP08069 1367 aa23.21■■□□□ 1.31
JRK-211ENST00000615982 CCNB3Q8WWL7 1395 aa23.21■■□□□ 1.31
JRK-211ENST00000615982 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
JRK-211ENST00000615982 POLA1P09884 1462 aaPredicted RBP23.18■■□□□ 1.3
JRK-211ENST00000615982 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
JRK-211ENST00000615982 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
JRK-211ENST00000615982 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
JRK-211ENST00000615982 KIF21AQ7Z4S6 1674 aa23.17■■□□□ 1.3
JRK-211ENST00000615982 RTL5Q5HYW3 569 aaPredicted RBP23.13■■□□□ 1.29
JRK-211ENST00000615982 RRBP1Q9P2E9 1410 aaKnown RBP23.13■■□□□ 1.29
JRK-211ENST00000615982 HIRIP3Q9BW71 556 aaPredicted RBP23.12■■□□□ 1.29
JRK-211ENST00000615982 WDR97A6NE52 1622 aa23.12■■□□□ 1.29
JRK-211ENST00000615982 RAD54L2Q9Y4B4 1467 aa23.09■■□□□ 1.29
JRK-211ENST00000615982 PPP1R15AO75807 674 aaPredicted RBP23.07■■□□□ 1.28
JRK-211ENST00000615982 ANP32CO43423 234 aa23.06■■□□□ 1.28
JRK-211ENST00000615982 CCER2I3L3R5 266 aa23.05■■□□□ 1.28
JRK-211ENST00000615982 B4GALNT3Q6L9W6 998 aa23.05■■□□□ 1.28
JRK-211ENST00000615982 RAB3GAP2Q9H2M9 1393 aa23.05■■□□□ 1.28
JRK-211ENST00000615982 EIF5BO60841 1220 aaKnown RBP23.04■■□□□ 1.28
JRK-211ENST00000615982 CUL7Q14999 1698 aa23.02■■□□□ 1.28
JRK-211ENST00000615982 HNRNPUQ00839 825 aaKnown RBP eCLIP23.01■■□□□ 1.27
JRK-211ENST00000615982 PPP4R2Q9NY27 417 aa23.01■■□□□ 1.27
JRK-211ENST00000615982 ABCA5Q8WWZ7 1642 aa22.98■■□□□ 1.27
JRK-211ENST00000615982 SIN3AQ96ST3 1273 aa22.98■■□□□ 1.27
JRK-211ENST00000615982 PHLDB1Q86UU1 1377 aa22.98■■□□□ 1.27
JRK-211ENST00000615982 FHOD3Q2V2M9 1422 aa22.95■■□□□ 1.26
JRK-211ENST00000615982 MRC2Q9UBG0 1479 aa22.95■■□□□ 1.26
JRK-211ENST00000615982 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
JRK-211ENST00000615982 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
JRK-211ENST00000615982 LRRC9Q6ZRR7 1453 aa22.92■■□□□ 1.26
JRK-211ENST00000615982 ZBTB47Q9UFB7 747 aaPredicted RBP22.89■■□□□ 1.26
JRK-211ENST00000615982 SETD5Q9C0A6 1442 aa22.89■■□□□ 1.25
JRK-211ENST00000615982 IPO9Q96P70 1041 aaKnown RBP22.89■■□□□ 1.25
JRK-211ENST00000615982 FHAD1B1AJZ9 1412 aa22.88■■□□□ 1.25
JRK-211ENST00000615982 PKNOX2Q96KN3 472 aa22.87■■□□□ 1.25
JRK-211ENST00000615982 GAPVD1Q14C86 1478 aa22.87■■□□□ 1.25
JRK-211ENST00000615982 ANP32AP39687 249 aaKnown RBP22.86■■□□□ 1.25
JRK-211ENST00000615982 WDR62O43379 1518 aa22.84■■□□□ 1.25
JRK-211ENST00000615982 CTTNBP2Q8WZ74 1663 aa22.82■■□□□ 1.24
JRK-211ENST00000615982 PCF11O94913 1555 aaKnown RBP22.82■■□□□ 1.24
JRK-211ENST00000615982 BRPF3Q9ULD4 1205 aa22.81■■□□□ 1.24
JRK-211ENST00000615982 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
JRK-211ENST00000615982 WASHC2AQ641Q2 1341 aa22.8■■□□□ 1.24
JRK-211ENST00000615982 MAPKBP1O60336 1514 aa22.79■■□□□ 1.24
JRK-211ENST00000615982 LAS1LQ9Y4W2 734 aaKnown RBP22.78■■□□□ 1.24
JRK-211ENST00000615982 PBRM1Q86U86 1689 aa22.77■■□□□ 1.24
JRK-211ENST00000615982 NEFMP07197 916 aa22.75■■□□□ 1.23
JRK-211ENST00000615982 TIMELESSQ9UNS1 1208 aa22.74■■□□□ 1.23
JRK-211ENST00000615982 IFT140Q96RY7 1462 aa22.74■■□□□ 1.23
JRK-211ENST00000615982 EFCAB5A4FU69 1503 aa22.73■■□□□ 1.23
JRK-211ENST00000615982 MAP3K1Q13233 1512 aa22.73■■□□□ 1.23
JRK-211ENST00000615982 MTUS2Q5JR59 1369 aa22.72■■□□□ 1.23
JRK-211ENST00000615982 ARID3CA6NKF2 412 aa22.71■■□□□ 1.23
JRK-211ENST00000615982 C11orf95C9JLR9 678 aaPredicted RBP22.7■■□□□ 1.22
JRK-211ENST00000615982 THOC2Q8NI27 1593 aaKnown RBP22.69■■□□□ 1.22
JRK-211ENST00000615982 ERCC6Q03468 1493 aa22.68■■□□□ 1.22
JRK-211ENST00000615982 NPM2Q86SE8 214 aaKnown RBP22.67■■□□□ 1.22
JRK-211ENST00000615982 WASHC2CQ9Y4E1 1318 aa22.67■■□□□ 1.22
JRK-211ENST00000615982 CASKIN1Q8WXD9 1431 aa22.65■■□□□ 1.22
JRK-211ENST00000615982 FYCO1Q9BQS8 1478 aa22.64■■□□□ 1.22
JRK-211ENST00000615982 ADAMTS12P58397 1594 aa22.64■■□□□ 1.22
JRK-211ENST00000615982 GRIN2BQ13224 1484 aa22.64■■□□□ 1.21
JRK-211ENST00000615982 CHIC2Q9UKJ5 165 aa22.62■■□□□ 1.21
JRK-211ENST00000615982 AQRO60306 1485 aaKnown RBP eCLIP22.62■■□□□ 1.218e-6■■■■□ 23.2
JRK-211ENST00000615982 CFAP43Q8NDM7 1665 aa22.62■■□□□ 1.21
JRK-211ENST00000615982 FMN1Q68DA7 1419 aa22.61■■□□□ 1.21
JRK-211ENST00000615982 TONSLQ96HA7 1378 aa22.59■■□□□ 1.21
JRK-211ENST00000615982 SAMD9Q5K651 1589 aa22.59■■□□□ 1.21
JRK-211ENST00000615982 CCDC184Q52MB2 194 aa22.58■■□□□ 1.21
JRK-211ENST00000615982 FGD6Q6ZV73 1430 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms