RNA–Protein interactions for RNA: ENST00000615879.4

POLR3E-219, Transcript of RNA polymerase III subunit E, humanhuman

TSL 2 BASIC

Gene POLR3E, Length 3,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-219ENST00000615879 PRDM2Q13029 1718 aa17.57■□□□□ 0.4
POLR3E-219ENST00000615879 VPS8Q8N3P4 1428 aa17.57■□□□□ 0.4
POLR3E-219ENST00000615879 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
POLR3E-219ENST00000615879 RTN4Q9NQC3 1192 aaKnown RBP17.57■□□□□ 0.4
POLR3E-219ENST00000615879 RBM19Q9Y4C8 960 aaKnown RBP17.56■□□□□ 0.4
POLR3E-219ENST00000615879 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
POLR3E-219ENST00000615879 PRKCSHP14314 528 aaPredicted RBP17.49■□□□□ 0.39
POLR3E-219ENST00000615879 ARAP1Q96P48 1450 aa17.48■□□□□ 0.39
POLR3E-219ENST00000615879 CUX2O14529 1486 aa17.46■□□□□ 0.39
POLR3E-219ENST00000615879 CCDC136Q96JN2 1154 aa17.45■□□□□ 0.38
POLR3E-219ENST00000615879 CDK11AQ9UQ88 783 aaPredicted RBP17.45■□□□□ 0.38
POLR3E-219ENST00000615879 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
POLR3E-219ENST00000615879 FGD5Q6ZNL6 1462 aa17.43■□□□□ 0.38
POLR3E-219ENST00000615879 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
POLR3E-219ENST00000615879 IGF1RP08069 1367 aa17.42■□□□□ 0.38
POLR3E-219ENST00000615879 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
POLR3E-219ENST00000615879 EIF5BO60841 1220 aaKnown RBP17.41■□□□□ 0.38
POLR3E-219ENST00000615879 NESP48681 1621 aa17.37■□□□□ 0.37
POLR3E-219ENST00000615879 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.37■□□□□ 0.37
POLR3E-219ENST00000615879 RTL5Q5HYW3 569 aaPredicted RBP17.36■□□□□ 0.37
POLR3E-219ENST00000615879 DEKP35659 375 aaKnown RBP17.34■□□□□ 0.37
POLR3E-219ENST00000615879 KANK4Q5T7N3 995 aaPredicted RBP17.34■□□□□ 0.37
POLR3E-219ENST00000615879 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
POLR3E-219ENST00000615879 ANO8Q9HCE9 1232 aaPredicted RBP17.33■□□□□ 0.37
POLR3E-219ENST00000615879 ARHGAP35Q9NRY4 1499 aa17.32■□□□□ 0.36
POLR3E-219ENST00000615879 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
POLR3E-219ENST00000615879 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
POLR3E-219ENST00000615879 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
POLR3E-219ENST00000615879 POLR3GLQ9BT43 218 aa17.29■□□□□ 0.36
POLR3E-219ENST00000615879 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
POLR3E-219ENST00000615879 RAD54L2Q9Y4B4 1467 aa17.29■□□□□ 0.36
POLR3E-219ENST00000615879 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
POLR3E-219ENST00000615879 TOPBP1Q92547 1522 aa17.28■□□□□ 0.36
POLR3E-219ENST00000615879 CHIC2Q9UKJ5 165 aa17.28■□□□□ 0.36
POLR3E-219ENST00000615879 ANP32CO43423 234 aa17.27■□□□□ 0.35
POLR3E-219ENST00000615879 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.35
POLR3E-219ENST00000615879 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
POLR3E-219ENST00000615879 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
POLR3E-219ENST00000615879 ABCA10Q8WWZ4 1543 aa17.22■□□□□ 0.35
POLR3E-219ENST00000615879 DHX57Q6P158 1386 aaKnown RBP17.21■□□□□ 0.35
POLR3E-219ENST00000615879 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
POLR3E-219ENST00000615879 MSH5O43196 834 aa17.2■□□□□ 0.34
POLR3E-219ENST00000615879 MAP3K1Q13233 1512 aa17.19■□□□□ 0.34
POLR3E-219ENST00000615879 MYT1LQ9UL68 1186 aa17.19■□□□□ 0.34
POLR3E-219ENST00000615879 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
POLR3E-219ENST00000615879 B4GALNT3Q6L9W6 998 aa17.16■□□□□ 0.34
POLR3E-219ENST00000615879 CFAP43Q8NDM7 1665 aa17.16■□□□□ 0.34
POLR3E-219ENST00000615879 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
POLR3E-219ENST00000615879 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
POLR3E-219ENST00000615879 TIAM1Q13009 1591 aa17.13■□□□□ 0.33
POLR3E-219ENST00000615879 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
POLR3E-219ENST00000615879 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
POLR3E-219ENST00000615879 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
POLR3E-219ENST00000615879 SIN3AQ96ST3 1273 aa17.11■□□□□ 0.33
POLR3E-219ENST00000615879 MAPKBP1O60336 1514 aa17.11■□□□□ 0.33
POLR3E-219ENST00000615879 MTUS2Q5JR59 1369 aa17.1■□□□□ 0.33
POLR3E-219ENST00000615879 RRP7BPQ9NSQ0 103 aa17.09■□□□□ 0.33
POLR3E-219ENST00000615879 CCNB3Q8WWL7 1395 aa17.08■□□□□ 0.32
POLR3E-219ENST00000615879 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
POLR3E-219ENST00000615879 CUL7Q14999 1698 aa17.07■□□□□ 0.32
POLR3E-219ENST00000615879 FHAD1B1AJZ9 1412 aa17.06■□□□□ 0.32
POLR3E-219ENST00000615879 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
POLR3E-219ENST00000615879 FHOD3Q2V2M9 1422 aa17.05■□□□□ 0.32
POLR3E-219ENST00000615879 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
POLR3E-219ENST00000615879 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
POLR3E-219ENST00000615879 LRRC9Q6ZRR7 1453 aa17.03■□□□□ 0.32
POLR3E-219ENST00000615879 LRRIQ1Q96JM4 1722 aa17.02■□□□□ 0.32
POLR3E-219ENST00000615879 ANP32AP39687 249 aaKnown RBP17.02■□□□□ 0.31
POLR3E-219ENST00000615879 PCF11O94913 1555 aaKnown RBP17.01■□□□□ 0.31
POLR3E-219ENST00000615879 ABCA5Q8WWZ7 1642 aa17.01■□□□□ 0.31
POLR3E-219ENST00000615879 IL27Q8NEV9 243 aa17■□□□□ 0.31
POLR3E-219ENST00000615879 EFCAB5A4FU69 1503 aa16.99■□□□□ 0.31
POLR3E-219ENST00000615879 CTTNBP2Q8WZ74 1663 aa16.98■□□□□ 0.31
POLR3E-219ENST00000615879 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
POLR3E-219ENST00000615879 ARXQ96QS3 562 aa16.98■□□□□ 0.31
POLR3E-219ENST00000615879 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
POLR3E-219ENST00000615879 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
POLR3E-219ENST00000615879 PHLDB1Q86UU1 1377 aa16.97■□□□□ 0.31
POLR3E-219ENST00000615879 CASKIN1Q8WXD9 1431 aa16.95■□□□□ 0.3
POLR3E-219ENST00000615879 FYCO1Q9BQS8 1478 aa16.94■□□□□ 0.3
POLR3E-219ENST00000615879 TARBP1Q13395 1621 aaKnown RBP16.93■□□□□ 0.3
POLR3E-219ENST00000615879 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
POLR3E-219ENST00000615879 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
POLR3E-219ENST00000615879 AQRO60306 1485 aaKnown RBP eCLIP16.91■□□□□ 0.35e-7■■■■□ 24.1
POLR3E-219ENST00000615879 FMN1Q68DA7 1419 aa16.91■□□□□ 0.3
POLR3E-219ENST00000615879 RAB3GAP2Q9H2M9 1393 aa16.88■□□□□ 0.29
POLR3E-219ENST00000615879 SAMD9Q5K651 1589 aa16.88■□□□□ 0.29
POLR3E-219ENST00000615879 MRC2Q9UBG0 1479 aa16.87■□□□□ 0.29
POLR3E-219ENST00000615879 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
POLR3E-219ENST00000615879 NEFMP07197 916 aa16.84■□□□□ 0.29
POLR3E-219ENST00000615879 FOXD1Q16676 465 aa16.83■□□□□ 0.29
POLR3E-219ENST00000615879 TONSLQ96HA7 1378 aa16.83■□□□□ 0.29
POLR3E-219ENST00000615879 SETD5Q9C0A6 1442 aa16.83■□□□□ 0.28
POLR3E-219ENST00000615879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.286e-7■□□□□ 10.3
POLR3E-219ENST00000615879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.282e-7■■■■□ 21.4
POLR3E-219ENST00000615879 MRS2Q9HD23 443 aa16.82■□□□□ 0.28
POLR3E-219ENST00000615879 PBRM1Q86U86 1689 aa16.8■□□□□ 0.28
POLR3E-219ENST00000615879 PPP4R2Q9NY27 417 aa16.79■□□□□ 0.28
POLR3E-219ENST00000615879 KDM5BQ9UGL1 1544 aa16.78■□□□□ 0.28
POLR3E-219ENST00000615879 GRIN2BQ13224 1484 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms