RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.78
SNPH-203ENST00000614659 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.77
SNPH-203ENST00000614659 MIER1Q8N108 512 aa19.88■□□□□ 0.77
SNPH-203ENST00000614659 PPP1R15AO75807 674 aaPredicted RBP19.87■□□□□ 0.77
SNPH-203ENST00000614659 CARMIL2Q6F5E8 1435 aa19.86■□□□□ 0.77
SNPH-203ENST00000614659 CHIC2Q9UKJ5 165 aa19.85■□□□□ 0.77
SNPH-203ENST00000614659 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
SNPH-203ENST00000614659 CFDP1Q9UEE9 299 aaPredicted RBP19.84■□□□□ 0.77
SNPH-203ENST00000614659 TRHP20396 242 aaPredicted RBP19.83■□□□□ 0.77
SNPH-203ENST00000614659 CUX2O14529 1486 aa19.83■□□□□ 0.77
SNPH-203ENST00000614659 VPS8Q8N3P4 1428 aa19.83■□□□□ 0.76
SNPH-203ENST00000614659 EIF4G2P78344 907 aaKnown RBP eCLIP19.82■□□□□ 0.76
SNPH-203ENST00000614659 SOGA1O94964 1423 aa19.81■□□□□ 0.76
SNPH-203ENST00000614659 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
SNPH-203ENST00000614659 CADPSQ9ULU8 1353 aa19.79■□□□□ 0.76
SNPH-203ENST00000614659 TIMELESSQ9UNS1 1208 aa19.78■□□□□ 0.76
SNPH-203ENST00000614659 CCNB3Q8WWL7 1395 aa19.77■□□□□ 0.75
SNPH-203ENST00000614659 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
SNPH-203ENST00000614659 FAM9BQ8IZU0 186 aa19.75■□□□□ 0.75
SNPH-203ENST00000614659 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
SNPH-203ENST00000614659 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
SNPH-203ENST00000614659 MRS2Q9HD23 443 aa19.72■□□□□ 0.75
SNPH-203ENST00000614659 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.72■□□□□ 0.75
SNPH-203ENST00000614659 WIZO95785 1651 aa19.72■□□□□ 0.75
SNPH-203ENST00000614659 C14orf37Q86TY3 774 aa19.71■□□□□ 0.75
SNPH-203ENST00000614659 HDGFP51858 240 aaKnown RBP19.69■□□□□ 0.74
SNPH-203ENST00000614659 KANK1Q14678 1352 aa19.66■□□□□ 0.74
SNPH-203ENST00000614659 RRP7BPQ9NSQ0 103 aa19.66■□□□□ 0.74
SNPH-203ENST00000614659 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
SNPH-203ENST00000614659 EIF5BO60841 1220 aaKnown RBP19.66■□□□□ 0.74
SNPH-203ENST00000614659 SMARCA4P51532 1647 aa19.64■□□□□ 0.73
SNPH-203ENST00000614659 CCDC136Q96JN2 1154 aa19.63■□□□□ 0.73
SNPH-203ENST00000614659 NPM2Q86SE8 214 aaKnown RBP19.62■□□□□ 0.73
SNPH-203ENST00000614659 WDR43Q15061 677 aaKnown RBP eCLIP19.62■□□□□ 0.73
SNPH-203ENST00000614659 SETD5Q9C0A6 1442 aa19.59■□□□□ 0.73
SNPH-203ENST00000614659 CDCA8Q53HL2 280 aa19.59■□□□□ 0.73
SNPH-203ENST00000614659 ARHGAP35Q9NRY4 1499 aa19.59■□□□□ 0.73
SNPH-203ENST00000614659 GLIPR1L2Q4G1C9 344 aa19.59■□□□□ 0.73
SNPH-203ENST00000614659 UPF2Q9HAU5 1272 aaKnown RBP19.59■□□□□ 0.73
SNPH-203ENST00000614659 KDM2AQ9Y2K7 1162 aa19.57■□□□□ 0.72
SNPH-203ENST00000614659 HAP1P54257 671 aaPredicted RBP19.54■□□□□ 0.72
SNPH-203ENST00000614659 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
SNPH-203ENST00000614659 FMN1Q68DA7 1419 aa19.52■□□□□ 0.71
SNPH-203ENST00000614659 ANP32BQ92688 251 aaKnown RBP19.51■□□□□ 0.71
SNPH-203ENST00000614659 CCER2I3L3R5 266 aa19.49■□□□□ 0.71
SNPH-203ENST00000614659 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
SNPH-203ENST00000614659 EFCAB2Q5VUJ9 269 aa19.48■□□□□ 0.71
SNPH-203ENST00000614659 HIRIP3Q9BW71 556 aaPredicted RBP19.46■□□□□ 0.71
SNPH-203ENST00000614659 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
SNPH-203ENST00000614659 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
SNPH-203ENST00000614659 SIN3AQ96ST3 1273 aa19.42■□□□□ 0.7
SNPH-203ENST00000614659 DDRGK1Q96HY6 314 aa19.4■□□□□ 0.7
SNPH-203ENST00000614659 CARD11Q9BXL7 1154 aa19.4■□□□□ 0.7
SNPH-203ENST00000614659 POGKQ9P215 609 aa19.39■□□□□ 0.69
SNPH-203ENST00000614659 NBR1Q14596 966 aa19.38■□□□□ 0.69
SNPH-203ENST00000614659 NCAPD3P42695 1498 aa19.38■□□□□ 0.69
SNPH-203ENST00000614659 RSPH4AQ5TD94 716 aa19.38■□□□□ 0.69
SNPH-203ENST00000614659 CFAP53Q96M91 514 aa19.38■□□□□ 0.69
SNPH-203ENST00000614659 SALL2Q9Y467 1007 aaPredicted RBP19.37■□□□□ 0.69
SNPH-203ENST00000614659 RGL3Q3MIN7 710 aa19.36■□□□□ 0.69
SNPH-203ENST00000614659 RAB3GAP2Q9H2M9 1393 aa19.35■□□□□ 0.69
SNPH-203ENST00000614659 PPP4R2Q9NY27 417 aa19.35■□□□□ 0.69
SNPH-203ENST00000614659 KANK4Q5T7N3 995 aaPredicted RBP19.35■□□□□ 0.69
SNPH-203ENST00000614659 ZBTB7CA1YPR0 619 aa19.34■□□□□ 0.69
SNPH-203ENST00000614659 MLECQ14165 292 aa19.33■□□□□ 0.69
SNPH-203ENST00000614659 JPH4Q96JJ6 628 aa19.33■□□□□ 0.69
SNPH-203ENST00000614659 A0A0G2JS52 829 aa19.33■□□□□ 0.68
SNPH-203ENST00000614659 HSP90AA1P07900 732 aaKnown RBP19.33■□□□□ 0.68
SNPH-203ENST00000614659 KNSTRNQ9Y448 316 aa19.33■□□□□ 0.68
SNPH-203ENST00000614659 BCL11AQ9H165 835 aa19.32■□□□□ 0.68
SNPH-203ENST00000614659 SUPT16HQ9Y5B9 1047 aaKnown RBP19.3■□□□□ 0.68
SNPH-203ENST00000614659 IRX6P78412 446 aaPredicted RBP19.29■□□□□ 0.68
SNPH-203ENST00000614659 ERICH6BQ5W0A0 696 aa19.29■□□□□ 0.68
SNPH-203ENST00000614659 CCDC18Q5T9S5 1454 aa19.26■□□□□ 0.67
SNPH-203ENST00000614659 ANP32EQ9BTT0 268 aa19.26■□□□□ 0.67
SNPH-203ENST00000614659 BECN1Q14457 450 aa19.25■□□□□ 0.67
SNPH-203ENST00000614659 GGT6Q6P531 493 aa19.24■□□□□ 0.67
SNPH-203ENST00000614659 MYH16Q9H6N6 1097 aa19.24■□□□□ 0.67
SNPH-203ENST00000614659 ANKRD30AQ9BXX3 1397 aa19.24■□□□□ 0.67
SNPH-203ENST00000614659 PTPRGP23470 1445 aa19.23■□□□□ 0.67
SNPH-203ENST00000614659 TMF1P82094 1093 aa19.2■□□□□ 0.66
SNPH-203ENST00000614659 NUDCQ9Y266 331 aa19.2■□□□□ 0.66
SNPH-203ENST00000614659 HSPA5P11021 654 aaKnown RBP19.2■□□□□ 0.66
SNPH-203ENST00000614659 LMOD2Q6P5Q4 547 aa19.18■□□□□ 0.66
SNPH-203ENST00000614659 EID1Q9Y6B2 187 aa19.18■□□□□ 0.66
SNPH-203ENST00000614659 PNNQ9H307 717 aaKnown RBP19.18■□□□□ 0.66
SNPH-203ENST00000614659 GAPVD1Q14C86 1478 aa19.18■□□□□ 0.66
SNPH-203ENST00000614659 SPAG9O60271 1321 aaKnown RBP19.17■□□□□ 0.66
SNPH-203ENST00000614659 KIF21BO75037 1637 aa19.17■□□□□ 0.66
SNPH-203ENST00000614659 DHX57Q6P158 1386 aaKnown RBP19.17■□□□□ 0.66
SNPH-203ENST00000614659 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
SNPH-203ENST00000614659 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
SNPH-203ENST00000614659 FHOD3Q2V2M9 1422 aa19.15■□□□□ 0.66
SNPH-203ENST00000614659 PPM1GO15355 546 aaPredicted RBP19.15■□□□□ 0.66
SNPH-203ENST00000614659 CYB5RLQ6IPT4 315 aa19.14■□□□□ 0.66
SNPH-203ENST00000614659 MPHOSPH9Q99550 1183 aa19.14■□□□□ 0.66
SNPH-203ENST00000614659 PLEKHG5O94827 1062 aa19.13■□□□□ 0.65
SNPH-203ENST00000614659 MS4A1P11836 297 aa19.13■□□□□ 0.65
SNPH-203ENST00000614659 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
SNPH-203ENST00000614659 CHMP4BQ9H444 224 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 344.5 ms