RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 TIAM1Q13009 1591 aa16.33■□□□□ 0.21
SENP3-EIF4A1-201ENST00000614237 APLP2Q06481 763 aa16.33■□□□□ 0.2
SENP3-EIF4A1-201ENST00000614237 CENPBP07199 599 aaPredicted RBP16.32■□□□□ 0.2
SENP3-EIF4A1-201ENST00000614237 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
SENP3-EIF4A1-201ENST00000614237 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
SENP3-EIF4A1-201ENST00000614237 TARBP1Q13395 1621 aaKnown RBP16.32■□□□□ 0.2
SENP3-EIF4A1-201ENST00000614237 RAD54L2Q9Y4B4 1467 aa16.31■□□□□ 0.2
SENP3-EIF4A1-201ENST00000614237 FHAD1B1AJZ9 1412 aa16.3■□□□□ 0.2
SENP3-EIF4A1-201ENST00000614237 CLSPNQ9HAW4 1339 aa16.3■□□□□ 0.2
SENP3-EIF4A1-201ENST00000614237 SAMD9Q5K651 1589 aa16.27■□□□□ 0.2
SENP3-EIF4A1-201ENST00000614237 FYCO1Q9BQS8 1478 aa16.25■□□□□ 0.19
SENP3-EIF4A1-201ENST00000614237 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
SENP3-EIF4A1-201ENST00000614237 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
SENP3-EIF4A1-201ENST00000614237 CASKIN1Q8WXD9 1431 aa16.21■□□□□ 0.19
SENP3-EIF4A1-201ENST00000614237 GAPVD1Q14C86 1478 aa16.21■□□□□ 0.19
SENP3-EIF4A1-201ENST00000614237 PCF11O94913 1555 aaKnown RBP16.2■□□□□ 0.18
SENP3-EIF4A1-201ENST00000614237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.2■□□□□ 0.186e-7■■□□□ 14.4
SENP3-EIF4A1-201ENST00000614237 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
SENP3-EIF4A1-201ENST00000614237 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
SENP3-EIF4A1-201ENST00000614237 MRC2Q9UBG0 1479 aa16.17■□□□□ 0.18
SENP3-EIF4A1-201ENST00000614237 CCNB3Q8WWL7 1395 aa16.16■□□□□ 0.18
SENP3-EIF4A1-201ENST00000614237 WDR62O43379 1518 aa16.15■□□□□ 0.18
SENP3-EIF4A1-201ENST00000614237 FMN1Q68DA7 1419 aa16.15■□□□□ 0.18
SENP3-EIF4A1-201ENST00000614237 SNAPC4Q5SXM2 1469 aa16.15■□□□□ 0.18
SENP3-EIF4A1-201ENST00000614237 ADAMTS12P58397 1594 aa16.12■□□□□ 0.17
SENP3-EIF4A1-201ENST00000614237 DHX57Q6P158 1386 aaKnown RBP16.1■□□□□ 0.17
SENP3-EIF4A1-201ENST00000614237 GRIN2BQ13224 1484 aa16.08■□□□□ 0.16
SENP3-EIF4A1-201ENST00000614237 IFT140Q96RY7 1462 aa16.08■□□□□ 0.16
SENP3-EIF4A1-201ENST00000614237 LRRIQ1Q96JM4 1722 aa16.07■□□□□ 0.16
SENP3-EIF4A1-201ENST00000614237 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
SENP3-EIF4A1-201ENST00000614237 FHOD3Q2V2M9 1422 aa16.04■□□□□ 0.16
SENP3-EIF4A1-201ENST00000614237 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
SENP3-EIF4A1-201ENST00000614237 ARHGEF11O15085 1522 aa16.03■□□□□ 0.16
SENP3-EIF4A1-201ENST00000614237 RANGAP1P46060 587 aaPredicted RBP16.03■□□□□ 0.16
SENP3-EIF4A1-201ENST00000614237 UGGT2Q9NYU1 1516 aa16.02■□□□□ 0.16
SENP3-EIF4A1-201ENST00000614237 PHLDB1Q86UU1 1377 aa16.02■□□□□ 0.15
SENP3-EIF4A1-201ENST00000614237 IQGAP2Q13576 1575 aa16.01■□□□□ 0.15
SENP3-EIF4A1-201ENST00000614237 MYT1Q01538 1121 aa16.01■□□□□ 0.15
SENP3-EIF4A1-201ENST00000614237 CCDC18Q5T9S5 1454 aa16■□□□□ 0.15
SENP3-EIF4A1-201ENST00000614237 ZNF316A6NFI3 1004 aaPredicted RBP16■□□□□ 0.15
SENP3-EIF4A1-201ENST00000614237 EHBP1L1Q8N3D4 1523 aa15.99■□□□□ 0.15
SENP3-EIF4A1-201ENST00000614237 HECW1Q76N89 1606 aa15.96■□□□□ 0.15
SENP3-EIF4A1-201ENST00000614237 SUPT6HQ7KZ85 1726 aaKnown RBP15.96■□□□□ 0.15
SENP3-EIF4A1-201ENST00000614237 SETD5Q9C0A6 1442 aa15.96■□□□□ 0.15
SENP3-EIF4A1-201ENST00000614237 MAPKBP1O60336 1514 aa15.94■□□□□ 0.14
SENP3-EIF4A1-201ENST00000614237 MIER1Q8N108 512 aa15.94■□□□□ 0.14
SENP3-EIF4A1-201ENST00000614237 FGD6Q6ZV73 1430 aa15.92■□□□□ 0.14
SENP3-EIF4A1-201ENST00000614237 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
SENP3-EIF4A1-201ENST00000614237 KIAA0586Q9BVV6 1533 aa15.91■□□□□ 0.14
SENP3-EIF4A1-201ENST00000614237 EIF4G3O43432 1585 aaKnown RBP15.91■□□□□ 0.14
SENP3-EIF4A1-201ENST00000614237 RAB3GAP2Q9H2M9 1393 aa15.9■□□□□ 0.14
SENP3-EIF4A1-201ENST00000614237 MAGI1Q96QZ7 1491 aaPredicted RBP15.9■□□□□ 0.14
SENP3-EIF4A1-201ENST00000614237 MYOM3Q5VTT5 1437 aa15.87■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 KIAA0556O60303 1618 aa15.87■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 TIMELESSQ9UNS1 1208 aa15.87■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 NCOA2Q15596 1464 aa15.86■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 AKNAQ7Z591 1439 aa15.85■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 BCANQ96GW7 911 aa15.85■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 MAGI3Q5TCQ9 1506 aa15.84■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 HFM1A2PYH4 1435 aa15.84■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 EPRSP07814 1512 aaKnown RBP15.84■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 DISP1Q96F81 1524 aa15.83■□□□□ 0.13
SENP3-EIF4A1-201ENST00000614237 PTPN23Q9H3S7 1636 aa15.83■□□□□ 0.12
SENP3-EIF4A1-201ENST00000614237 MIA2Q96PC5 1412 aa15.83■□□□□ 0.12
SENP3-EIF4A1-201ENST00000614237 GCC2Q8IWJ2 1684 aa15.82■□□□□ 0.12
SENP3-EIF4A1-201ENST00000614237 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
SENP3-EIF4A1-201ENST00000614237 P3H3Q8IVL6 736 aa15.8■□□□□ 0.12
SENP3-EIF4A1-201ENST00000614237 SYNJ2O15056 1496 aa15.8■□□□□ 0.12
SENP3-EIF4A1-201ENST00000614237 RAPGEF6Q8TEU7 1601 aa15.77■□□□□ 0.12
SENP3-EIF4A1-201ENST00000614237 NUP160Q12769 1436 aa15.77■□□□□ 0.12
SENP3-EIF4A1-201ENST00000614237 ADCY10Q96PN6 1610 aa15.76■□□□□ 0.11
SENP3-EIF4A1-201ENST00000614237 CEP170Q5SW79 1584 aa15.75■□□□□ 0.11
SENP3-EIF4A1-201ENST00000614237 UACAQ9BZF9 1416 aa15.75■□□□□ 0.11
SENP3-EIF4A1-201ENST00000614237 PTPRKQ15262 1439 aa15.74■□□□□ 0.11
SENP3-EIF4A1-201ENST00000614237 NAIPQ13075 1403 aa15.73■□□□□ 0.11
SENP3-EIF4A1-201ENST00000614237 ERCC6Q03468 1493 aa15.72■□□□□ 0.11
SENP3-EIF4A1-201ENST00000614237 NUP153P49790 1475 aaKnown RBP15.71■□□□□ 0.11
SENP3-EIF4A1-201ENST00000614237 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
SENP3-EIF4A1-201ENST00000614237 DNMT1P26358 1616 aaKnown RBP15.68■□□□□ 0.1
SENP3-EIF4A1-201ENST00000614237 ROCK1Q13464 1354 aa15.68■□□□□ 0.1
SENP3-EIF4A1-201ENST00000614237 CDK13Q14004 1512 aaKnown RBP15.66■□□□□ 0.1
SENP3-EIF4A1-201ENST00000614237 ITSN2Q9NZM3 1697 aa15.66■□□□□ 0.1
SENP3-EIF4A1-201ENST00000614237 ABCA8O94911 1581 aa15.64■□□□□ 0.09
SENP3-EIF4A1-201ENST00000614237 ATP1B4Q9UN42 357 aaPredicted RBP15.62■□□□□ 0.09
SENP3-EIF4A1-201ENST00000614237 CARMIL2Q6F5E8 1435 aa15.61■□□□□ 0.09
SENP3-EIF4A1-201ENST00000614237 ITGAEP38570 1179 aa15.6■□□□□ 0.09
SENP3-EIF4A1-201ENST00000614237 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
SENP3-EIF4A1-201ENST00000614237 CROCC2H7BZ55 1655 aa15.6■□□□□ 0.09
SENP3-EIF4A1-201ENST00000614237 KDM5BQ9UGL1 1544 aa15.6■□□□□ 0.09
SENP3-EIF4A1-201ENST00000614237 ADGBQ8N7X0 1667 aa15.59■□□□□ 0.09
SENP3-EIF4A1-201ENST00000614237 SHROOM2Q13796 1616 aa15.58■□□□□ 0.08
SENP3-EIF4A1-201ENST00000614237 DENND4BO75064 1496 aaPredicted RBP15.57■□□□□ 0.08
SENP3-EIF4A1-201ENST00000614237 DAPK1P53355 1430 aa15.57■□□□□ 0.08
SENP3-EIF4A1-201ENST00000614237 ADGRL2O95490 1459 aa15.56■□□□□ 0.08
SENP3-EIF4A1-201ENST00000614237 PPP1R15AO75807 674 aaPredicted RBP15.56■□□□□ 0.08
SENP3-EIF4A1-201ENST00000614237 BCL11AQ9H165 835 aa15.55■□□□□ 0.08
SENP3-EIF4A1-201ENST00000614237 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
SENP3-EIF4A1-201ENST00000614237 SUPT16HQ9Y5B9 1047 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms