RNA–Protein interactions for RNA: ENST00000612661.1

MARCKS-201, Transcript of myristoylated alanine rich protein kinase C substrate, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MARCKS, Length 4,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARCKS-201ENST00000612661 TSPY10P0CW01 314 aa22.38■■□□□ 1.17
MARCKS-201ENST00000612661 RUSC2Q8N2Y8 1516 aa22.37■■□□□ 1.17
MARCKS-201ENST00000612661 ESF1Q9H501 851 aaKnown RBP22.37■■□□□ 1.17
MARCKS-201ENST00000612661 CHGAP10645 457 aaKnown RBP22.33■■□□□ 1.17
MARCKS-201ENST00000612661 RRP7BPQ9NSQ0 103 aa22.33■■□□□ 1.16
MARCKS-201ENST00000612661 RAD54L2Q9Y4B4 1467 aa22.32■■□□□ 1.16
MARCKS-201ENST00000612661 TRHP20396 242 aaPredicted RBP22.29■■□□□ 1.16
MARCKS-201ENST00000612661 CFDP1Q9UEE9 299 aaPredicted RBP22.28■■□□□ 1.16
MARCKS-201ENST00000612661 NEFLP07196 543 aa22.27■■□□□ 1.16
MARCKS-201ENST00000612661 FGD5Q6ZNL6 1462 aa22.25■■□□□ 1.15
MARCKS-201ENST00000612661 JPH4Q96JJ6 628 aa22.23■■□□□ 1.15
MARCKS-201ENST00000612661 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
MARCKS-201ENST00000612661 AQRO60306 1485 aaKnown RBP eCLIP22.2■■□□□ 1.141e-6■□□□□ 8.9
MARCKS-201ENST00000612661 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
MARCKS-201ENST00000612661 STAG3Q9UJ98 1225 aa22.18■■□□□ 1.14
MARCKS-201ENST00000612661 CFTRP13569 1480 aa22.18■■□□□ 1.14
MARCKS-201ENST00000612661 RAPGEF2Q9Y4G8 1499 aa22.18■■□□□ 1.14
MARCKS-201ENST00000612661 CYB5RLQ6IPT4 315 aa22.13■■□□□ 1.13
MARCKS-201ENST00000612661 KANK4Q5T7N3 995 aaPredicted RBP22.12■■□□□ 1.13
MARCKS-201ENST00000612661 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
MARCKS-201ENST00000612661 CARMIL2Q6F5E8 1435 aa22.11■■□□□ 1.13
MARCKS-201ENST00000612661 IGF1RP08069 1367 aa22.09■■□□□ 1.13
MARCKS-201ENST00000612661 OSCARQ8IYS5 282 aa22.09■■□□□ 1.13
MARCKS-201ENST00000612661 ARID4BQ4LE39 1312 aaPredicted RBP22.08■■□□□ 1.13
MARCKS-201ENST00000612661 GAPVD1Q14C86 1478 aa22.08■■□□□ 1.13
MARCKS-201ENST00000612661 FHOD3Q2V2M9 1422 aa22.08■■□□□ 1.13
MARCKS-201ENST00000612661 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
MARCKS-201ENST00000612661 MIER1Q8N108 512 aa22.04■■□□□ 1.12
MARCKS-201ENST00000612661 KDM2AQ9Y2K7 1162 aa22.04■■□□□ 1.12
MARCKS-201ENST00000612661 CCNB3Q8WWL7 1395 aa22■■□□□ 1.11
MARCKS-201ENST00000612661 TONSLQ96HA7 1378 aa21.98■■□□□ 1.11
MARCKS-201ENST00000612661 VPS8Q8N3P4 1428 aa21.96■■□□□ 1.11
MARCKS-201ENST00000612661 MLECQ14165 292 aa21.96■■□□□ 1.11
MARCKS-201ENST00000612661 RGL3Q3MIN7 710 aa21.94■■□□□ 1.1
MARCKS-201ENST00000612661 MRC2Q9UBG0 1479 aa21.92■■□□□ 1.1
MARCKS-201ENST00000612661 TOPBP1Q92547 1522 aa21.91■■□□□ 1.1
MARCKS-201ENST00000612661 SYNJ1O43426 1573 aa21.91■■□□□ 1.1
MARCKS-201ENST00000612661 FMN1Q68DA7 1419 aa21.88■■□□□ 1.09
MARCKS-201ENST00000612661 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
MARCKS-201ENST00000612661 HIRIP3Q9BW71 556 aaPredicted RBP21.87■■□□□ 1.09
MARCKS-201ENST00000612661 DDX10Q13206 875 aaKnown RBP21.86■■□□□ 1.09
MARCKS-201ENST00000612661 PTPRGP23470 1445 aa21.86■■□□□ 1.09
MARCKS-201ENST00000612661 CUX1P39880 1505 aa21.85■■□□□ 1.09
MARCKS-201ENST00000612661 ANP32CO43423 234 aa21.84■■□□□ 1.09
MARCKS-201ENST00000612661 GGT6Q6P531 493 aa21.8■■□□□ 1.08
MARCKS-201ENST00000612661 GRIN2BQ13224 1484 aa21.78■■□□□ 1.08
MARCKS-201ENST00000612661 HNRNPMP52272 730 aaKnown RBP eCLIP21.77■■□□□ 1.085e-6■■□□□ 13.2
MARCKS-201ENST00000612661 EFCAB2Q5VUJ9 269 aa21.77■■□□□ 1.08
MARCKS-201ENST00000612661 SIN3AQ96ST3 1273 aa21.75■■□□□ 1.07
MARCKS-201ENST00000612661 PPP1R15AO75807 674 aaPredicted RBP21.72■■□□□ 1.07
MARCKS-201ENST00000612661 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
MARCKS-201ENST00000612661 BCL11AQ9H165 835 aa21.7■■□□□ 1.06
MARCKS-201ENST00000612661 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
MARCKS-201ENST00000612661 ARHGAP35Q9NRY4 1499 aa21.69■■□□□ 1.06
MARCKS-201ENST00000612661 PEG3Q9GZU2 1588 aa21.69■■□□□ 1.06
MARCKS-201ENST00000612661 FOXD1Q16676 465 aa21.68■■□□□ 1.06
MARCKS-201ENST00000612661 FKBP8Q14318 412 aa21.66■■□□□ 1.06
MARCKS-201ENST00000612661 PLEKHG5O94827 1062 aa21.65■■□□□ 1.06
MARCKS-201ENST00000612661 SNAPC4Q5SXM2 1469 aa21.65■■□□□ 1.06
MARCKS-201ENST00000612661 DNMBPQ6XZF7 1577 aa21.64■■□□□ 1.05
MARCKS-201ENST00000612661 TOP2BQ02880 1626 aa21.64■■□□□ 1.05
MARCKS-201ENST00000612661 URB2Q14146 1524 aaKnown RBP21.61■■□□□ 1.05
MARCKS-201ENST00000612661 PRG4Q92954 1404 aaPredicted RBP21.59■■□□□ 1.05
MARCKS-201ENST00000612661 KIF3BO15066 747 aa21.59■■□□□ 1.05
MARCKS-201ENST00000612661 FAM69CQ0P6D2 419 aa21.59■■□□□ 1.05
MARCKS-201ENST00000612661 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.04
MARCKS-201ENST00000612661 ANP32EQ9BTT0 268 aa21.56■■□□□ 1.04
MARCKS-201ENST00000612661 SPAG9O60271 1321 aaKnown RBP21.54■■□□□ 1.04
MARCKS-201ENST00000612661 SLC24A1O60721 1099 aa21.54■■□□□ 1.04
MARCKS-201ENST00000612661 PKD2Q13563 968 aa21.53■■□□□ 1.04
MARCKS-201ENST00000612661 C14orf37Q86TY3 774 aa21.53■■□□□ 1.04
MARCKS-201ENST00000612661 ZNF644Q9H582 1327 aaPredicted RBP21.52■■□□□ 1.04
MARCKS-201ENST00000612661 CCDC18Q5T9S5 1454 aa21.52■■□□□ 1.04
MARCKS-201ENST00000612661 PRXQ9BXM0 1461 aa21.49■■□□□ 1.03
MARCKS-201ENST00000612661 HNRNPUQ00839 825 aaKnown RBP eCLIP21.47■■□□□ 1.03
MARCKS-201ENST00000612661 DCAF11Q8TEB1 546 aa21.47■■□□□ 1.03
MARCKS-201ENST00000612661 NUP155O75694 1391 aa21.47■■□□□ 1.03
MARCKS-201ENST00000612661 ABCA10Q8WWZ4 1543 aa21.46■■□□□ 1.03
MARCKS-201ENST00000612661 EIF4G2P78344 907 aaKnown RBP eCLIP21.45■■□□□ 1.02
MARCKS-201ENST00000612661 IRX6P78412 446 aaPredicted RBP21.44■■□□□ 1.02
MARCKS-201ENST00000612661 SETD5Q9C0A6 1442 aa21.44■■□□□ 1.02
MARCKS-201ENST00000612661 ARAP1Q96P48 1450 aa21.43■■□□□ 1.02
MARCKS-201ENST00000612661 TMC1Q8TDI8 760 aa21.43■■□□□ 1.02
MARCKS-201ENST00000612661 KANK1Q14678 1352 aa21.43■■□□□ 1.02
MARCKS-201ENST00000612661 ANKRD30AQ9BXX3 1397 aa21.42■■□□□ 1.02
MARCKS-201ENST00000612661 RAB3GAP2Q9H2M9 1393 aa21.42■■□□□ 1.02
MARCKS-201ENST00000612661 PRDM2Q13029 1718 aa21.42■■□□□ 1.02
MARCKS-201ENST00000612661 CARD11Q9BXL7 1154 aa21.42■■□□□ 1.02
MARCKS-201ENST00000612661 SUPT16HQ9Y5B9 1047 aaKnown RBP21.42■■□□□ 1.02
MARCKS-201ENST00000612661 FAM9BQ8IZU0 186 aa21.41■■□□□ 1.02
MARCKS-201ENST00000612661 MPHOSPH9Q99550 1183 aa21.39■■□□□ 1.02
MARCKS-201ENST00000612661 KIF21BO75037 1637 aa21.39■■□□□ 1.02
MARCKS-201ENST00000612661 SALL2Q9Y467 1007 aaPredicted RBP21.39■■□□□ 1.01
MARCKS-201ENST00000612661 CLSPNQ9HAW4 1339 aa21.39■■□□□ 1.01
MARCKS-201ENST00000612661 NBR1Q14596 966 aa21.38■■□□□ 1.01
MARCKS-201ENST00000612661 SAFB2Q14151 953 aaKnown RBP eCLIP21.37■■□□□ 1.01
MARCKS-201ENST00000612661 WASHC2CQ9Y4E1 1318 aa21.37■■□□□ 1.01
MARCKS-201ENST00000612661 NUTM2DQ5VT03 806 aaPredicted RBP21.36■■□□□ 1.01
MARCKS-201ENST00000612661 AFAP1Q8N556 730 aa21.35■■□□□ 1.01
MARCKS-201ENST00000612661 RTL5Q5HYW3 569 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms