RNA–Protein interactions for RNA: ENST00000612233.1

NOP56-219, Transcript of NOP56 ribonucleoprotein, humanhuman

Gene NOP56, Length 2,980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-219ENST00000612233 CLSPNQ9HAW4 1339 aa20.86■□□□□ 0.93
NOP56-219ENST00000612233 TARBP1Q13395 1621 aaKnown RBP20.81■□□□□ 0.92
NOP56-219ENST00000612233 CCER1Q8TC90 406 aaPredicted RBP20.8■□□□□ 0.92
NOP56-219ENST00000612233 NESP48681 1621 aa20.8■□□□□ 0.92
NOP56-219ENST00000612233 SAMD9Q5K651 1589 aa20.8■□□□□ 0.92
NOP56-219ENST00000612233 THOC2Q8NI27 1593 aaKnown RBP20.79■□□□□ 0.92
NOP56-219ENST00000612233 FYCO1Q9BQS8 1478 aa20.78■□□□□ 0.92
NOP56-219ENST00000612233 RAD54L2Q9Y4B4 1467 aa20.74■□□□□ 0.91
NOP56-219ENST00000612233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
NOP56-219ENST00000612233 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
NOP56-219ENST00000612233 PCF11O94913 1555 aaKnown RBP20.71■□□□□ 0.91
NOP56-219ENST00000612233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.7■□□□□ 0.9
NOP56-219ENST00000612233 CASKIN1Q8WXD9 1431 aa20.7■□□□□ 0.9
NOP56-219ENST00000612233 LRRC9Q6ZRR7 1453 aa20.7■□□□□ 0.9
NOP56-219ENST00000612233 GAPVD1Q14C86 1478 aa20.67■□□□□ 0.9
NOP56-219ENST00000612233 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
NOP56-219ENST00000612233 FMN1Q68DA7 1419 aa20.64■□□□□ 0.89
NOP56-219ENST00000612233 BCL11AQ9H165 835 aa20.63■□□□□ 0.89
NOP56-219ENST00000612233 CCNB3Q8WWL7 1395 aa20.63■□□□□ 0.89
NOP56-219ENST00000612233 WDR62O43379 1518 aa20.62■□□□□ 0.89
NOP56-219ENST00000612233 SNAPC4Q5SXM2 1469 aa20.61■□□□□ 0.89
NOP56-219ENST00000612233 ADAMTS12P58397 1594 aa20.6■□□□□ 0.89
NOP56-219ENST00000612233 KANK4Q5T7N3 995 aaPredicted RBP20.55■□□□□ 0.88
NOP56-219ENST00000612233 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
NOP56-219ENST00000612233 DHX57Q6P158 1386 aaKnown RBP20.52■□□□□ 0.88
NOP56-219ENST00000612233 GRIN2BQ13224 1484 aa20.52■□□□□ 0.87
NOP56-219ENST00000612233 LRRIQ1Q96JM4 1722 aa20.49■□□□□ 0.87
NOP56-219ENST00000612233 CCDC18Q5T9S5 1454 aa20.48■□□□□ 0.87
NOP56-219ENST00000612233 UGGT2Q9NYU1 1516 aa20.47■□□□□ 0.87
NOP56-219ENST00000612233 EHBP1L1Q8N3D4 1523 aa20.47■□□□□ 0.87
NOP56-219ENST00000612233 IQGAP2Q13576 1575 aa20.47■□□□□ 0.87
NOP56-219ENST00000612233 ARHGEF11O15085 1522 aa20.46■□□□□ 0.87
NOP56-219ENST00000612233 HECW1Q76N89 1606 aa20.44■□□□□ 0.86
NOP56-219ENST00000612233 FHOD3Q2V2M9 1422 aa20.44■□□□□ 0.86
NOP56-219ENST00000612233 SUPT6HQ7KZ85 1726 aaKnown RBP20.43■□□□□ 0.86
NOP56-219ENST00000612233 ZNF316A6NFI3 1004 aaPredicted RBP20.41■□□□□ 0.86
NOP56-219ENST00000612233 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
NOP56-219ENST00000612233 PHLDB1Q86UU1 1377 aa20.39■□□□□ 0.85
NOP56-219ENST00000612233 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
NOP56-219ENST00000612233 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
NOP56-219ENST00000612233 TCOF1Q13428 1488 aaKnown RBP20.33■□□□□ 0.85
NOP56-219ENST00000612233 MAPKBP1O60336 1514 aa20.32■□□□□ 0.84
NOP56-219ENST00000612233 FGD6Q6ZV73 1430 aa20.32■□□□□ 0.84
NOP56-219ENST00000612233 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
NOP56-219ENST00000612233 MAGI1Q96QZ7 1491 aaPredicted RBP20.32■□□□□ 0.84
NOP56-219ENST00000612233 EIF4G3O43432 1585 aaKnown RBP20.31■□□□□ 0.84
NOP56-219ENST00000612233 DIEXFQ68CQ4 756 aaKnown RBP20.31■□□□□ 0.84
NOP56-219ENST00000612233 KIAA0586Q9BVV6 1533 aa20.31■□□□□ 0.84
NOP56-219ENST00000612233 AKNAQ7Z591 1439 aa20.3■□□□□ 0.84
NOP56-219ENST00000612233 TIMELESSQ9UNS1 1208 aa20.28■□□□□ 0.84
NOP56-219ENST00000612233 KIAA0556O60303 1618 aa20.28■□□□□ 0.84
NOP56-219ENST00000612233 RAB3GAP2Q9H2M9 1393 aa20.27■□□□□ 0.84
NOP56-219ENST00000612233 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.83
NOP56-219ENST00000612233 GCC2Q8IWJ2 1684 aa20.26■□□□□ 0.83
NOP56-219ENST00000612233 ACIN1Q9UKV3 1341 aaKnown RBP20.25■□□□□ 0.83
NOP56-219ENST00000612233 NCOA2Q15596 1464 aa20.24■□□□□ 0.83
NOP56-219ENST00000612233 PTPN23Q9H3S7 1636 aa20.23■□□□□ 0.83
NOP56-219ENST00000612233 HFM1A2PYH4 1435 aa20.22■□□□□ 0.83
NOP56-219ENST00000612233 MIA2Q96PC5 1412 aa20.22■□□□□ 0.83
NOP56-219ENST00000612233 GRIN2AQ12879 1464 aa20.22■□□□□ 0.83
NOP56-219ENST00000612233 EPRSP07814 1512 aaKnown RBP20.21■□□□□ 0.83
NOP56-219ENST00000612233 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
NOP56-219ENST00000612233 MTUS2Q5JR59 1369 aa20.18■□□□□ 0.82
NOP56-219ENST00000612233 MAGI3Q5TCQ9 1506 aa20.18■□□□□ 0.82
NOP56-219ENST00000612233 ADCY10Q96PN6 1610 aa20.18■□□□□ 0.82
NOP56-219ENST00000612233 DISP1Q96F81 1524 aa20.17■□□□□ 0.82
NOP56-219ENST00000612233 SYNJ2O15056 1496 aa20.16■□□□□ 0.82
NOP56-219ENST00000612233 RAPGEF6Q8TEU7 1601 aa20.16■□□□□ 0.82
NOP56-219ENST00000612233 ZNF608Q9ULD9 1512 aaPredicted RBP20.14■□□□□ 0.82
NOP56-219ENST00000612233 EIF5BO60841 1220 aaKnown RBP20.14■□□□□ 0.81
NOP56-219ENST00000612233 NUP160Q12769 1436 aa20.12■□□□□ 0.81
NOP56-219ENST00000612233 UACAQ9BZF9 1416 aa20.11■□□□□ 0.81
NOP56-219ENST00000612233 CEP170Q5SW79 1584 aa20.08■□□□□ 0.81
NOP56-219ENST00000612233 ITSN2Q9NZM3 1697 aa20.08■□□□□ 0.81
NOP56-219ENST00000612233 NAIPQ13075 1403 aa20.05■□□□□ 0.8
NOP56-219ENST00000612233 CENPBP07199 599 aaPredicted RBP20.05■□□□□ 0.8
NOP56-219ENST00000612233 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
NOP56-219ENST00000612233 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
NOP56-219ENST00000612233 DNMT1P26358 1616 aaKnown RBP20.04■□□□□ 0.8
NOP56-219ENST00000612233 ROCK1Q13464 1354 aa20.03■□□□□ 0.8
NOP56-219ENST00000612233 NUP153P49790 1475 aaKnown RBP20.02■□□□□ 0.8
NOP56-219ENST00000612233 PTPRKQ15262 1439 aa20.01■□□□□ 0.79
NOP56-219ENST00000612233 ADGBQ8N7X0 1667 aa19.98■□□□□ 0.79
NOP56-219ENST00000612233 CROCC2H7BZ55 1655 aa19.97■□□□□ 0.79
NOP56-219ENST00000612233 FAM50AQ14320 339 aaKnown RBP19.97■□□□□ 0.79
NOP56-219ENST00000612233 ABCA8O94911 1581 aa19.97■□□□□ 0.79
NOP56-219ENST00000612233 CDK13Q14004 1512 aaKnown RBP19.97■□□□□ 0.79
NOP56-219ENST00000612233 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
NOP56-219ENST00000612233 CARMIL2Q6F5E8 1435 aa19.94■□□□□ 0.78
NOP56-219ENST00000612233 TROQ12816 1431 aaPredicted RBP19.92■□□□□ 0.78
NOP56-219ENST00000612233 SHROOM2Q13796 1616 aa19.9■□□□□ 0.78
NOP56-219ENST00000612233 ADGRL2O95490 1459 aa19.9■□□□□ 0.78
NOP56-219ENST00000612233 KDM5BQ9UGL1 1544 aa19.88■□□□□ 0.77
NOP56-219ENST00000612233 DAPK1P53355 1430 aa19.86■□□□□ 0.77
NOP56-219ENST00000612233 ATP1B4Q9UN42 357 aaPredicted RBP19.86■□□□□ 0.77
NOP56-219ENST00000612233 CDK11AQ9UQ88 783 aaPredicted RBP19.85■□□□□ 0.77
NOP56-219ENST00000612233 SHANK2Q9UPX8 1470 aa19.85■□□□□ 0.77
NOP56-219ENST00000612233 PLEKHG5O94827 1062 aa19.84■□□□□ 0.77
NOP56-219ENST00000612233 ITGAEP38570 1179 aa19.83■□□□□ 0.77
NOP56-219ENST00000612233 KIF14Q15058 1648 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms