RNA–Protein interactions for RNA: ENST00000609795.5

HNF4A-208, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-208ENST00000609795 JPH4Q96JJ6 628 aa29.48■■■□□ 2.31
HNF4A-208ENST00000609795 SHROOM2Q13796 1616 aa29.47■■■□□ 2.31
HNF4A-208ENST00000609795 CTTNBP2Q8WZ74 1663 aa29.47■■■□□ 2.31
HNF4A-208ENST00000609795 IQGAP2Q13576 1575 aa29.43■■■□□ 2.3
HNF4A-208ENST00000609795 ARHGEF11O15085 1522 aa29.43■■■□□ 2.3
HNF4A-208ENST00000609795 RIMBP3CA6NJZ7 1639 aa29.42■■■□□ 2.3
HNF4A-208ENST00000609795 RIMBP3BA6NNM3 1639 aa29.42■■■□□ 2.3
HNF4A-208ENST00000609795 RIMBP3Q9UFD9 1639 aa29.42■■■□□ 2.3
HNF4A-208ENST00000609795 GOLGA3Q08378 1498 aa29.41■■■□□ 2.3
HNF4A-208ENST00000609795 EHMT2Q96KQ7 1210 aa29.4■■■□□ 2.3
HNF4A-208ENST00000609795 PRG4Q92954 1404 aaPredicted RBP29.37■■■□□ 2.29
HNF4A-208ENST00000609795 UBTFP17480 764 aaKnown RBP29.34■■■□□ 2.29
HNF4A-208ENST00000609795 ERCC6L2Q5T890 1561 aa29.32■■■□□ 2.28
HNF4A-208ENST00000609795 UGGT2Q9NYU1 1516 aa29.29■■■□□ 2.28
HNF4A-208ENST00000609795 CARMIL2Q6F5E8 1435 aa29.24■■■□□ 2.27
HNF4A-208ENST00000609795 ARAP1Q96P48 1450 aa29.22■■■□□ 2.27
HNF4A-208ENST00000609795 DISP1Q96F81 1524 aa29.2■■■□□ 2.26
HNF4A-208ENST00000609795 CYB5RLQ6IPT4 315 aa29.19■■■□□ 2.26
HNF4A-208ENST00000609795 KIAA0556O60303 1618 aa29.15■■■□□ 2.26
HNF4A-208ENST00000609795 RANGAP1P46060 587 aaPredicted RBP29.14■■■□□ 2.26
HNF4A-208ENST00000609795 TNIKQ9UKE5 1360 aa29.12■■■□□ 2.25
HNF4A-208ENST00000609795 LOC105371045A0A1W2PR82 267 aa29.11■■■□□ 2.25
HNF4A-208ENST00000609795 SAMD9Q5K651 1589 aa29.09■■■□□ 2.25
HNF4A-208ENST00000609795 PTPRGP23470 1445 aa29.07■■■□□ 2.24
HNF4A-208ENST00000609795 TTBK1Q5TCY1 1321 aaPredicted RBP29.05■■■□□ 2.24
HNF4A-208ENST00000609795 P3H3Q8IVL6 736 aa29.05■■■□□ 2.24
HNF4A-208ENST00000609795 EFCAB5A4FU69 1503 aa29.03■■■□□ 2.24
HNF4A-208ENST00000609795 ARHGAP35Q9NRY4 1499 aa28.94■■■□□ 2.22
HNF4A-208ENST00000609795 FHOD3Q2V2M9 1422 aa28.92■■■□□ 2.22
HNF4A-208ENST00000609795 CLIP1P30622 1438 aa28.88■■■□□ 2.21
HNF4A-208ENST00000609795 UACAQ9BZF9 1416 aa28.87■■■□□ 2.21
HNF4A-208ENST00000609795 ADCY10Q96PN6 1610 aa28.85■■■□□ 2.21
HNF4A-208ENST00000609795 CEP162Q5TB80 1403 aa28.84■■■□□ 2.21
HNF4A-208ENST00000609795 UHRF1BP1LA0JNW5 1464 aa28.83■■■□□ 2.21
HNF4A-208ENST00000609795 PLB1Q6P1J6 1458 aa28.83■■■□□ 2.21
HNF4A-208ENST00000609795 ABCA8O94911 1581 aa28.81■■■□□ 2.2
HNF4A-208ENST00000609795 ABCC2Q92887 1545 aa28.8■■■□□ 2.2
HNF4A-208ENST00000609795 NPM1P06748 294 aaKnown RBP eCLIP28.78■■■□□ 2.2
HNF4A-208ENST00000609795 FMN1Q68DA7 1419 aa28.76■■■□□ 2.19
HNF4A-208ENST00000609795 RAPGEF6Q8TEU7 1601 aa28.75■■■□□ 2.19
HNF4A-208ENST00000609795 KDM5BQ9UGL1 1544 aa28.69■■■□□ 2.18
HNF4A-208ENST00000609795 ZCCHC11Q5TAX3 1644 aaKnown RBP28.64■■■□□ 2.18
HNF4A-208ENST00000609795 NUP153P49790 1475 aaKnown RBP28.62■■■□□ 2.17
HNF4A-208ENST00000609795 ATP1B4Q9UN42 357 aaPredicted RBP28.61■■■□□ 2.17
HNF4A-208ENST00000609795 MAPKBP1O60336 1514 aa28.6■■■□□ 2.17
HNF4A-208ENST00000609795 ARID3CA6NKF2 412 aa28.59■■■□□ 2.17
HNF4A-208ENST00000609795 ATP10BO94823 1461 aa28.59■■■□□ 2.17
HNF4A-208ENST00000609795 HECW1Q76N89 1606 aa28.58■■■□□ 2.17
HNF4A-208ENST00000609795 CASKIN1Q8WXD9 1431 aa28.57■■■□□ 2.16
HNF4A-208ENST00000609795 PCF11O94913 1555 aaKnown RBP28.55■■■□□ 2.16
HNF4A-208ENST00000609795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.54■■■□□ 2.16
HNF4A-208ENST00000609795 HNRNPUL2Q1KMD3 747 aaKnown RBP28.54■■■□□ 2.16
HNF4A-208ENST00000609795 ASXL2Q76L83 1435 aa28.52■■■□□ 2.16
HNF4A-208ENST00000609795 FYCO1Q9BQS8 1478 aa28.51■■■□□ 2.15
HNF4A-208ENST00000609795 EPRSP07814 1512 aaKnown RBP28.49■■■□□ 2.15
HNF4A-208ENST00000609795 TRHP20396 242 aaPredicted RBP28.48■■■□□ 2.15
HNF4A-208ENST00000609795 LRRIQ1Q96JM4 1722 aa28.48■■■□□ 2.15
HNF4A-208ENST00000609795 VPS8Q8N3P4 1428 aa28.47■■■□□ 2.15
HNF4A-208ENST00000609795 CDK13Q14004 1512 aaKnown RBP28.45■■■□□ 2.15
HNF4A-208ENST00000609795 WDR7Q9Y4E6 1490 aa28.43■■■□□ 2.14
HNF4A-208ENST00000609795 ABCC10Q5T3U5 1492 aa28.42■■■□□ 2.14
HNF4A-208ENST00000609795 CCDC18Q5T9S5 1454 aa28.42■■■□□ 2.14
HNF4A-208ENST00000609795 PLEKHD1A6NEE1 506 aa28.41■■■□□ 2.14
HNF4A-208ENST00000609795 DIP2BQ9P265 1576 aa28.39■■■□□ 2.14
HNF4A-208ENST00000609795 KIF13AQ9H1H9 1805 aa28.39■■■□□ 2.13
HNF4A-208ENST00000609795 FAM69CQ0P6D2 419 aa28.38■■■□□ 2.13
HNF4A-208ENST00000609795 CDK11AQ9UQ88 783 aaPredicted RBP28.38■■■□□ 2.13
HNF4A-208ENST00000609795 KCNH8Q96L42 1107 aa28.37■■■□□ 2.13
HNF4A-208ENST00000609795 GLI2P10070 1586 aa28.33■■■□□ 2.12
HNF4A-208ENST00000609795 TROQ12816 1431 aaPredicted RBP28.25■■■□□ 2.11
HNF4A-208ENST00000609795 MAGI3Q5TCQ9 1506 aa28.23■■■□□ 2.11
HNF4A-208ENST00000609795 CFAP43Q8NDM7 1665 aa28.23■■■□□ 2.11
HNF4A-208ENST00000609795 TIAM1Q13009 1591 aa28.21■■■□□ 2.11
HNF4A-208ENST00000609795 MAP3K4Q9Y6R4 1608 aa28.21■■■□□ 2.11
HNF4A-208ENST00000609795 APLP2Q06481 763 aa28.2■■■□□ 2.1
HNF4A-208ENST00000609795 ABCA9Q8IUA7 1624 aa28.2■■■□□ 2.1
HNF4A-208ENST00000609795 MAP3K1Q13233 1512 aa28.19■■■□□ 2.1
HNF4A-208ENST00000609795 TSPOAP1O95153 1857 aa28.18■■■□□ 2.1
HNF4A-208ENST00000609795 MTUS2Q5JR59 1369 aa28.17■■■□□ 2.1
HNF4A-208ENST00000609795 CD109Q6YHK3 1445 aa28.16■■■□□ 2.1
HNF4A-208ENST00000609795 KIF14Q15058 1648 aa28.15■■■□□ 2.1
HNF4A-208ENST00000609795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.15■■■□□ 2.1
HNF4A-208ENST00000609795 EHBP1L1Q8N3D4 1523 aa28.12■■■□□ 2.09
HNF4A-208ENST00000609795 TTC37Q6PGP7 1564 aa28.1■■■□□ 2.09
HNF4A-208ENST00000609795 PPRC1Q5VV67 1664 aaKnown RBP28.1■■■□□ 2.09
HNF4A-208ENST00000609795 LRRC9Q6ZRR7 1453 aa28.09■■■□□ 2.09
HNF4A-208ENST00000609795 KANK4Q5T7N3 995 aaPredicted RBP28.07■■■□□ 2.08
HNF4A-208ENST00000609795 TEX14Q8IWB6 1497 aa28.04■■■□□ 2.08
HNF4A-208ENST00000609795 MYO5CQ9NQX4 1742 aa28.03■■■□□ 2.08
HNF4A-208ENST00000609795 SUPT6HQ7KZ85 1726 aaKnown RBP28.01■■■□□ 2.07
HNF4A-208ENST00000609795 PLCH2O75038 1416 aa28■■■□□ 2.07
HNF4A-208ENST00000609795 NCOA2Q15596 1464 aa27.95■■■□□ 2.07
HNF4A-208ENST00000609795 CDC42BPAQ5VT25 1732 aa27.95■■■□□ 2.07
HNF4A-208ENST00000609795 ARAP3Q8WWN8 1544 aa27.94■■■□□ 2.06
HNF4A-208ENST00000609795 CCNB3Q8WWL7 1395 aa27.94■■■□□ 2.06
HNF4A-208ENST00000609795 PREX2Q70Z35 1606 aa27.93■■■□□ 2.06
HNF4A-208ENST00000609795 CDC42BPBQ9Y5S2 1711 aa27.93■■■□□ 2.06
HNF4A-208ENST00000609795 GPATCH8Q9UKJ3 1502 aaKnown RBP27.92■■■□□ 2.06
HNF4A-208ENST00000609795 FANCAO15360 1455 aa27.92■■■□□ 2.06
HNF4A-208ENST00000609795 EFCAB2Q5VUJ9 269 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms