RNA–Protein interactions for RNA: ENST00000609795.5

HNF4A-208, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-208ENST00000609795 NISCHQ9Y2I1 1504 aa42.82■■■■■ 4.45
HNF4A-208ENST00000609795 CCDC180Q9P1Z9 1646 aa37.9■■■■□ 3.66
HNF4A-208ENST00000609795 ABCC9O60706 1549 aa36.73■■■■□ 3.47
HNF4A-208ENST00000609795 ZCCHC6Q5VYS8 1495 aaKnown RBP35.73■■■■□ 3.31
HNF4A-208ENST00000609795 DCAF8L2P0C7V8 631 aa35.68■■■■□ 3.3
HNF4A-208ENST00000609795 NACADO15069 1562 aa35.55■■■■□ 3.28
HNF4A-208ENST00000609795 RB1CC1Q8TDY2 1594 aa35.5■■■■□ 3.27
HNF4A-208ENST00000609795 MYO15BQ96JP2 1530 aa35.45■■■■□ 3.27
HNF4A-208ENST00000609795 DCAF1Q9Y4B6 1507 aa35.44■■■■□ 3.26
HNF4A-208ENST00000609795 UNC13AQ9UPW8 1703 aa34.73■■■■□ 3.15
HNF4A-208ENST00000609795 SCRIBQ14160 1630 aa34.61■■■■□ 3.13
HNF4A-208ENST00000609795 PABPN1Q86U42 306 aaKnown RBP eCLIP34.4■■■■□ 3.1
HNF4A-208ENST00000609795 BICRAQ9NZM4 1560 aa34.4■■■■□ 3.1
HNF4A-208ENST00000609795 SHROOM4Q9ULL8 1493 aa34.06■■■■□ 3.04
HNF4A-208ENST00000609795 EIF4G1Q04637 1599 aaKnown RBP33.47■■■□□ 2.95
HNF4A-208ENST00000609795 DNAJC5BQ9UF47 199 aa33.38■■■□□ 2.93
HNF4A-208ENST00000609795 CECR2Q9BXF3 1484 aa33.31■■■□□ 2.92
HNF4A-208ENST00000609795 CC2D2AQ9P2K1 1620 aa33.24■■■□□ 2.91
HNF4A-208ENST00000609795 BAZ1AQ9NRL2 1556 aaPredicted RBP33.17■■■□□ 2.9
HNF4A-208ENST00000609795 SMARCA4P51532 1647 aa33.14■■■□□ 2.9
HNF4A-208ENST00000609795 MROH2BQ7Z745 1585 aa33■■■□□ 2.87
HNF4A-208ENST00000609795 ATAD2BQ9ULI0 1458 aa32.86■■■□□ 2.85
HNF4A-208ENST00000609795 SMARCA2P51531 1590 aa32.84■■■□□ 2.85
HNF4A-208ENST00000609795 PEG3Q9GZU2 1588 aa32.81■■■□□ 2.84
HNF4A-208ENST00000609795 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
HNF4A-208ENST00000609795 RSF1Q96T23 1441 aaPredicted RBP32.77■■■□□ 2.84
HNF4A-208ENST00000609795 WIZO95785 1651 aa32.69■■■□□ 2.82
HNF4A-208ENST00000609795 HMGXB3Q12766 1538 aa32.65■■■□□ 2.82
HNF4A-208ENST00000609795 BAZ1BQ9UIG0 1483 aaKnown RBP32.61■■■□□ 2.81
HNF4A-208ENST00000609795 TOP2AP11388 1531 aaKnown RBP32.34■■■□□ 2.77
HNF4A-208ENST00000609795 SUPT5HO00267 1087 aaKnown RBP32.27■■■□□ 2.76
HNF4A-208ENST00000609795 CCDC88BA6NC98 1476 aa31.98■■■□□ 2.71
HNF4A-208ENST00000609795 NESP48681 1621 aa31.89■■■□□ 2.7
HNF4A-208ENST00000609795 LAMC3Q9Y6N6 1575 aa31.88■■■□□ 2.69
HNF4A-208ENST00000609795 CADPSQ9ULU8 1353 aa31.87■■■□□ 2.69
HNF4A-208ENST00000609795 CFTRP13569 1480 aa31.75■■■□□ 2.67
HNF4A-208ENST00000609795 PDS5BQ9NTI5 1447 aa31.65■■■□□ 2.66
HNF4A-208ENST00000609795 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
HNF4A-208ENST00000609795 PRDM2Q13029 1718 aa31.58■■■□□ 2.65
HNF4A-208ENST00000609795 KIF21AQ7Z4S6 1674 aa31.54■■■□□ 2.64
HNF4A-208ENST00000609795 FANCD2Q9BXW9 1451 aa31.49■■■□□ 2.63
HNF4A-208ENST00000609795 CEP164Q9UPV0 1460 aa31.41■■■□□ 2.62
HNF4A-208ENST00000609795 THOC2Q8NI27 1593 aaKnown RBP31.31■■■□□ 2.6
HNF4A-208ENST00000609795 MRC2Q9UBG0 1479 aa31.28■■■□□ 2.6
HNF4A-208ENST00000609795 WDR62O43379 1518 aa31.17■■■□□ 2.58
HNF4A-208ENST00000609795 URB2Q14146 1524 aaKnown RBP31.15■■■□□ 2.58
HNF4A-208ENST00000609795 CUX2O14529 1486 aa31.14■■■□□ 2.57
HNF4A-208ENST00000609795 ABCC8Q09428 1581 aa31.08■■■□□ 2.57
HNF4A-208ENST00000609795 TOPBP1Q92547 1522 aa31.03■■■□□ 2.56
HNF4A-208ENST00000609795 DNMBPQ6XZF7 1577 aa31.03■■■□□ 2.56
HNF4A-208ENST00000609795 CUX1P39880 1505 aa30.93■■■□□ 2.54
HNF4A-208ENST00000609795 WRNQ14191 1432 aaPredicted RBP eCLIP30.89■■■□□ 2.53
HNF4A-208ENST00000609795 POLA1P09884 1462 aaPredicted RBP30.79■■■□□ 2.52
HNF4A-208ENST00000609795 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
HNF4A-208ENST00000609795 TOP2BQ02880 1626 aa30.78■■■□□ 2.52
HNF4A-208ENST00000609795 BIVM-ERCC5R4GMW8 1640 aa30.78■■■□□ 2.52
HNF4A-208ENST00000609795 FGD5Q6ZNL6 1462 aa30.77■■■□□ 2.52
HNF4A-208ENST00000609795 IFT140Q96RY7 1462 aa30.74■■■□□ 2.51
HNF4A-208ENST00000609795 SOGA1O94964 1423 aa30.7■■■□□ 2.5
HNF4A-208ENST00000609795 TARBP1Q13395 1621 aaKnown RBP30.67■■■□□ 2.5
HNF4A-208ENST00000609795 RAD54L2Q9Y4B4 1467 aa30.66■■■□□ 2.5
HNF4A-208ENST00000609795 ZNF608Q9ULD9 1512 aaPredicted RBP30.57■■■□□ 2.48
HNF4A-208ENST00000609795 WDR97A6NE52 1622 aa30.51■■■□□ 2.47
HNF4A-208ENST00000609795 ABCA10Q8WWZ4 1543 aa30.49■■■□□ 2.47
HNF4A-208ENST00000609795 TDRD9Q8NDG6 1382 aaKnown RBP30.47■■■□□ 2.47
HNF4A-208ENST00000609795 TRIM41Q8WV44 630 aa30.47■■■□□ 2.47
HNF4A-208ENST00000609795 EIF4G3O43432 1585 aaKnown RBP30.46■■■□□ 2.47
HNF4A-208ENST00000609795 AQRO60306 1485 aaKnown RBP eCLIP30.46■■■□□ 2.472e-7■■■■■ 27.8
HNF4A-208ENST00000609795 ABCA5Q8WWZ7 1642 aa30.34■■■□□ 2.45
HNF4A-208ENST00000609795 GAPVD1Q14C86 1478 aa30.33■■■□□ 2.45
HNF4A-208ENST00000609795 CHIC1Q5VXU3 224 aa30.33■■■□□ 2.45
HNF4A-208ENST00000609795 GRIN2BQ13224 1484 aa30.27■■■□□ 2.44
HNF4A-208ENST00000609795 PBRM1Q86U86 1689 aa30.26■■■□□ 2.43
HNF4A-208ENST00000609795 KIF27Q86VH2 1401 aa30.22■■■□□ 2.43
HNF4A-208ENST00000609795 SNAPC4Q5SXM2 1469 aa30.17■■■□□ 2.42
HNF4A-208ENST00000609795 MAGI1Q96QZ7 1491 aaPredicted RBP30.15■■■□□ 2.42
HNF4A-208ENST00000609795 ERICH3Q5RHP9 1530 aa30.14■■■□□ 2.42
HNF4A-208ENST00000609795 RUSC2Q8N2Y8 1516 aa30.07■■■□□ 2.4
HNF4A-208ENST00000609795 IGF1RP08069 1367 aa30.06■■■□□ 2.4
HNF4A-208ENST00000609795 FBLN2P98095 1184 aa30.05■■■□□ 2.4
HNF4A-208ENST00000609795 CHD1O14646 1710 aa30.03■■■□□ 2.4
HNF4A-208ENST00000609795 CHMP7Q8WUX9 453 aaPredicted RBP30.03■■■□□ 2.4
HNF4A-208ENST00000609795 SYNJ2O15056 1496 aa30.03■■■□□ 2.4
HNF4A-208ENST00000609795 ADAMTS12P58397 1594 aa30.01■■■□□ 2.39
HNF4A-208ENST00000609795 FHAD1B1AJZ9 1412 aa29.99■■■□□ 2.39
HNF4A-208ENST00000609795 OSCARQ8IYS5 282 aa29.97■■■□□ 2.39
HNF4A-208ENST00000609795 CUL7Q14999 1698 aa29.95■■■□□ 2.39
HNF4A-208ENST00000609795 EEA1Q15075 1411 aa29.89■■■□□ 2.38
HNF4A-208ENST00000609795 CARMIL1Q5VZK9 1371 aa29.89■■■□□ 2.37
HNF4A-208ENST00000609795 GRIN2AQ12879 1464 aa29.88■■■□□ 2.37
HNF4A-208ENST00000609795 CSRNP3Q8WYN3 585 aa29.84■■■□□ 2.37
HNF4A-208ENST00000609795 FAM9AQ8IZU1 332 aaPredicted RBP29.82■■■□□ 2.36
HNF4A-208ENST00000609795 DNAJC5Q9H3Z4 198 aa29.77■■■□□ 2.36
HNF4A-208ENST00000609795 RAPGEF2Q9Y4G8 1499 aa29.74■■■□□ 2.35
HNF4A-208ENST00000609795 PRXQ9BXM0 1461 aa29.73■■■□□ 2.35
HNF4A-208ENST00000609795 NUP160Q12769 1436 aa29.72■■■□□ 2.35
HNF4A-208ENST00000609795 CEP170Q5SW79 1584 aa29.72■■■□□ 2.35
HNF4A-208ENST00000609795 CLASP1Q7Z460 1538 aa29.69■■■□□ 2.34
HNF4A-208ENST00000609795 KIF21BO75037 1637 aa29.56■■■□□ 2.32
HNF4A-208ENST00000609795 KIAA0586Q9BVV6 1533 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms