RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 RIMBP3BA6NNM3 1639 aa24.95■■□□□ 1.58
CSNK2A1-209ENST00000609606 SHROOM2Q13796 1616 aa24.95■■□□□ 1.58
CSNK2A1-209ENST00000609606 RIMBP3Q9UFD9 1639 aa24.95■■□□□ 1.58
CSNK2A1-209ENST00000609606 KIAA0586Q9BVV6 1533 aa24.95■■□□□ 1.58
CSNK2A1-209ENST00000609606 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.58
CSNK2A1-209ENST00000609606 KIF21BO75037 1637 aa24.86■■□□□ 1.57
CSNK2A1-209ENST00000609606 JPH4Q96JJ6 628 aa24.85■■□□□ 1.57
CSNK2A1-209ENST00000609606 CTTNBP2Q8WZ74 1663 aa24.84■■□□□ 1.57
CSNK2A1-209ENST00000609606 IQGAP2Q13576 1575 aa24.84■■□□□ 1.57
CSNK2A1-209ENST00000609606 PHF23Q9BUL5 403 aaPredicted RBP24.83■■□□□ 1.57
CSNK2A1-209ENST00000609606 PRG4Q92954 1404 aaPredicted RBP24.78■■□□□ 1.56
CSNK2A1-209ENST00000609606 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
CSNK2A1-209ENST00000609606 ERCC6L2Q5T890 1561 aa24.77■■□□□ 1.56
CSNK2A1-209ENST00000609606 UGGT2Q9NYU1 1516 aa24.73■■□□□ 1.55
CSNK2A1-209ENST00000609606 GOLGA3Q08378 1498 aa24.69■■□□□ 1.54
CSNK2A1-209ENST00000609606 CYB5RLQ6IPT4 315 aa24.67■■□□□ 1.54
CSNK2A1-209ENST00000609606 CARMIL2Q6F5E8 1435 aa24.67■■□□□ 1.54
CSNK2A1-209ENST00000609606 DISP1Q96F81 1524 aa24.63■■□□□ 1.53
CSNK2A1-209ENST00000609606 KIAA0556O60303 1618 aa24.6■■□□□ 1.53
CSNK2A1-209ENST00000609606 TNIKQ9UKE5 1360 aa24.56■■□□□ 1.52
CSNK2A1-209ENST00000609606 UBTFP17480 764 aaKnown RBP24.55■■□□□ 1.52
CSNK2A1-209ENST00000609606 PTPRGP23470 1445 aa24.52■■□□□ 1.52
CSNK2A1-209ENST00000609606 SAMD9Q5K651 1589 aa24.52■■□□□ 1.52
CSNK2A1-209ENST00000609606 SENP3Q9H4L4 574 aaPredicted RBP24.52■■□□□ 1.52
CSNK2A1-209ENST00000609606 EHMT2Q96KQ7 1210 aa24.49■■□□□ 1.51
CSNK2A1-209ENST00000609606 EFCAB5A4FU69 1503 aa24.45■■□□□ 1.51
CSNK2A1-209ENST00000609606 ADCY10Q96PN6 1610 aa24.41■■□□□ 1.5
CSNK2A1-209ENST00000609606 UHRF1BP1LA0JNW5 1464 aa24.38■■□□□ 1.49
CSNK2A1-209ENST00000609606 UACAQ9BZF9 1416 aa24.37■■□□□ 1.49
CSNK2A1-209ENST00000609606 TTBK1Q5TCY1 1321 aaPredicted RBP24.36■■□□□ 1.49
CSNK2A1-209ENST00000609606 RANGAP1P46060 587 aaPredicted RBP24.36■■□□□ 1.49
CSNK2A1-209ENST00000609606 P3H3Q8IVL6 736 aa24.35■■□□□ 1.49
CSNK2A1-209ENST00000609606 ABCC2Q92887 1545 aa24.35■■□□□ 1.49
CSNK2A1-209ENST00000609606 ABCA8O94911 1581 aa24.33■■□□□ 1.48
CSNK2A1-209ENST00000609606 ARHGAP35Q9NRY4 1499 aa24.32■■□□□ 1.48
CSNK2A1-209ENST00000609606 FHOD3Q2V2M9 1422 aa24.32■■□□□ 1.48
CSNK2A1-209ENST00000609606 PLB1Q6P1J6 1458 aa24.3■■□□□ 1.48
CSNK2A1-209ENST00000609606 NPM1P06748 294 aaKnown RBP eCLIP24.27■■□□□ 1.48
CSNK2A1-209ENST00000609606 LOC105371045A0A1W2PR82 267 aa24.25■■□□□ 1.47
CSNK2A1-209ENST00000609606 KDM5BQ9UGL1 1544 aa24.25■■□□□ 1.47
CSNK2A1-209ENST00000609606 CLIP1P30622 1438 aa24.24■■□□□ 1.47
CSNK2A1-209ENST00000609606 MAPKBP1O60336 1514 aa24.24■■□□□ 1.47
CSNK2A1-209ENST00000609606 RAPGEF6Q8TEU7 1601 aa24.23■■□□□ 1.47
CSNK2A1-209ENST00000609606 FMN1Q68DA7 1419 aa24.21■■□□□ 1.47
CSNK2A1-209ENST00000609606 ZCCHC11Q5TAX3 1644 aaKnown RBP24.19■■□□□ 1.46
CSNK2A1-209ENST00000609606 CEP162Q5TB80 1403 aa24.18■■□□□ 1.46
CSNK2A1-209ENST00000609606 NUP153P49790 1475 aaKnown RBP24.13■■□□□ 1.45
CSNK2A1-209ENST00000609606 ASXL2Q76L83 1435 aa24.1■■□□□ 1.45
CSNK2A1-209ENST00000609606 ATP10BO94823 1461 aa24.1■■□□□ 1.45
CSNK2A1-209ENST00000609606 TRHP20396 242 aaPredicted RBP24.08■■□□□ 1.45
CSNK2A1-209ENST00000609606 ABCC10Q5T3U5 1492 aa24.07■■□□□ 1.44
CSNK2A1-209ENST00000609606 HECW1Q76N89 1606 aa24.07■■□□□ 1.44
CSNK2A1-209ENST00000609606 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
CSNK2A1-209ENST00000609606 DIP2BQ9P265 1576 aa24.05■■□□□ 1.44
CSNK2A1-209ENST00000609606 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
CSNK2A1-209ENST00000609606 WDR7Q9Y4E6 1490 aa24.03■■□□□ 1.44
CSNK2A1-209ENST00000609606 PCF11O94913 1555 aaKnown RBP24.02■■□□□ 1.44
CSNK2A1-209ENST00000609606 FYCO1Q9BQS8 1478 aa24■■□□□ 1.43
CSNK2A1-209ENST00000609606 EPRSP07814 1512 aaKnown RBP24■■□□□ 1.43
CSNK2A1-209ENST00000609606 ARID3CA6NKF2 412 aa23.99■■□□□ 1.43
CSNK2A1-209ENST00000609606 GLI2P10070 1586 aa23.99■■□□□ 1.43
CSNK2A1-209ENST00000609606 FAM69CQ0P6D2 419 aa23.97■■□□□ 1.43
CSNK2A1-209ENST00000609606 LRRIQ1Q96JM4 1722 aa23.96■■□□□ 1.43
CSNK2A1-209ENST00000609606 CDK13Q14004 1512 aaKnown RBP23.94■■□□□ 1.42
CSNK2A1-209ENST00000609606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.94■■□□□ 1.42
CSNK2A1-209ENST00000609606 HNRNPUL2Q1KMD3 747 aaKnown RBP23.94■■□□□ 1.42
CSNK2A1-209ENST00000609606 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
CSNK2A1-209ENST00000609606 CCDC18Q5T9S5 1454 aa23.94■■□□□ 1.42
CSNK2A1-209ENST00000609606 PLEKHD1A6NEE1 506 aa23.9■■□□□ 1.42
CSNK2A1-209ENST00000609606 VPS8Q8N3P4 1428 aa23.89■■□□□ 1.41
CSNK2A1-209ENST00000609606 MAP3K4Q9Y6R4 1608 aa23.88■■□□□ 1.41
CSNK2A1-209ENST00000609606 CDK11AQ9UQ88 783 aaPredicted RBP23.87■■□□□ 1.41
CSNK2A1-209ENST00000609606 KCNH8Q96L42 1107 aa23.85■■□□□ 1.41
CSNK2A1-209ENST00000609606 CFAP43Q8NDM7 1665 aa23.85■■□□□ 1.41
CSNK2A1-209ENST00000609606 ABCA9Q8IUA7 1624 aa23.84■■□□□ 1.41
CSNK2A1-209ENST00000609606 TSPOAP1O95153 1857 aa23.83■■□□□ 1.4
CSNK2A1-209ENST00000609606 TROQ12816 1431 aaPredicted RBP23.8■■□□□ 1.4
CSNK2A1-209ENST00000609606 PPRC1Q5VV67 1664 aaKnown RBP23.79■■□□□ 1.4
CSNK2A1-209ENST00000609606 CD109Q6YHK3 1445 aa23.77■■□□□ 1.4
CSNK2A1-209ENST00000609606 MAGI3Q5TCQ9 1506 aa23.75■■□□□ 1.39
CSNK2A1-209ENST00000609606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.74■■□□□ 1.39
CSNK2A1-209ENST00000609606 KIF14Q15058 1648 aa23.74■■□□□ 1.39
CSNK2A1-209ENST00000609606 TEX14Q8IWB6 1497 aa23.74■■□□□ 1.39
CSNK2A1-209ENST00000609606 MAP3K1Q13233 1512 aa23.71■■□□□ 1.39
CSNK2A1-209ENST00000609606 TIAM1Q13009 1591 aa23.7■■□□□ 1.38
CSNK2A1-209ENST00000609606 TTC37Q6PGP7 1564 aa23.7■■□□□ 1.38
CSNK2A1-209ENST00000609606 MTUS2Q5JR59 1369 aa23.66■■□□□ 1.38
CSNK2A1-209ENST00000609606 EHBP1L1Q8N3D4 1523 aa23.66■■□□□ 1.38
CSNK2A1-209ENST00000609606 MYO5CQ9NQX4 1742 aa23.64■■□□□ 1.38
CSNK2A1-209ENST00000609606 ARAP3Q8WWN8 1544 aa23.63■■□□□ 1.37
CSNK2A1-209ENST00000609606 PHLDB1Q86UU1 1377 aa23.62■■□□□ 1.37
CSNK2A1-209ENST00000609606 PLCH2O75038 1416 aa23.61■■□□□ 1.37
CSNK2A1-209ENST00000609606 NEO1Q92859 1461 aa23.61■■□□□ 1.37
CSNK2A1-209ENST00000609606 KDM6BO15054 1643 aa23.6■■□□□ 1.37
CSNK2A1-209ENST00000609606 CFAP74Q9C0B2 1584 aa23.6■■□□□ 1.37
CSNK2A1-209ENST00000609606 LRRC9Q6ZRR7 1453 aa23.59■■□□□ 1.37
CSNK2A1-209ENST00000609606 APLP2Q06481 763 aa23.57■■□□□ 1.36
CSNK2A1-209ENST00000609606 FANCAO15360 1455 aa23.56■■□□□ 1.36
CSNK2A1-209ENST00000609606 PREX2Q70Z35 1606 aa23.56■■□□□ 1.36
CSNK2A1-209ENST00000609606 CDC42BPAQ5VT25 1732 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms