RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 IQGAP2Q13576 1575 aa14.49□□□□□ -0.09
ITGB5-212ENST00000608657 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
ITGB5-212ENST00000608657 KIAA0586Q9BVV6 1533 aa14.49□□□□□ -0.09
ITGB5-212ENST00000608657 SHROOM2Q13796 1616 aa14.46□□□□□ -0.09
ITGB5-212ENST00000608657 UBTFP17480 764 aaKnown RBP14.44□□□□□ -0.1
ITGB5-212ENST00000608657 UGGT2Q9NYU1 1516 aa14.39□□□□□ -0.11
ITGB5-212ENST00000608657 JPH4Q96JJ6 628 aa14.38□□□□□ -0.11
ITGB5-212ENST00000608657 ARHGEF11O15085 1522 aa14.37□□□□□ -0.11
ITGB5-212ENST00000608657 PRG4Q92954 1404 aaPredicted RBP14.37□□□□□ -0.11
ITGB5-212ENST00000608657 RIMBP3CA6NJZ7 1639 aa14.37□□□□□ -0.11
ITGB5-212ENST00000608657 RIMBP3BA6NNM3 1639 aa14.37□□□□□ -0.11
ITGB5-212ENST00000608657 RIMBP3Q9UFD9 1639 aa14.37□□□□□ -0.11
ITGB5-212ENST00000608657 TNIKQ9UKE5 1360 aa14.36□□□□□ -0.11
ITGB5-212ENST00000608657 KIAA0556O60303 1618 aa14.36□□□□□ -0.11
ITGB5-212ENST00000608657 ERCC6L2Q5T890 1561 aa14.35□□□□□ -0.11
ITGB5-212ENST00000608657 DNAJC5Q9H3Z4 198 aa14.35□□□□□ -0.11
ITGB5-212ENST00000608657 CARMIL2Q6F5E8 1435 aa14.34□□□□□ -0.11
ITGB5-212ENST00000608657 LOC105371045A0A1W2PR82 267 aa14.34□□□□□ -0.11
ITGB5-212ENST00000608657 SAMD9Q5K651 1589 aa14.34□□□□□ -0.11
ITGB5-212ENST00000608657 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.12
ITGB5-212ENST00000608657 DISP1Q96F81 1524 aa14.33□□□□□ -0.12
ITGB5-212ENST00000608657 RANGAP1P46060 587 aaPredicted RBP14.33□□□□□ -0.12
ITGB5-212ENST00000608657 ARAP1Q96P48 1450 aa14.26□□□□□ -0.13
ITGB5-212ENST00000608657 ARHGAP35Q9NRY4 1499 aa14.26□□□□□ -0.13
ITGB5-212ENST00000608657 CLIP1P30622 1438 aa14.26□□□□□ -0.13
ITGB5-212ENST00000608657 CEP162Q5TB80 1403 aa14.26□□□□□ -0.13
ITGB5-212ENST00000608657 P3H3Q8IVL6 736 aa14.24□□□□□ -0.13
ITGB5-212ENST00000608657 FHOD3Q2V2M9 1422 aa14.24□□□□□ -0.13
ITGB5-212ENST00000608657 TTBK1Q5TCY1 1321 aaPredicted RBP14.23□□□□□ -0.13
ITGB5-212ENST00000608657 PTPRGP23470 1445 aa14.22□□□□□ -0.13
ITGB5-212ENST00000608657 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
ITGB5-212ENST00000608657 FMN1Q68DA7 1419 aa14.16□□□□□ -0.14
ITGB5-212ENST00000608657 RAPGEF6Q8TEU7 1601 aa14.16□□□□□ -0.14
ITGB5-212ENST00000608657 ABCA8O94911 1581 aa14.15□□□□□ -0.14
ITGB5-212ENST00000608657 ADCY10Q96PN6 1610 aa14.15□□□□□ -0.14
ITGB5-212ENST00000608657 ABCC2Q92887 1545 aa14.15□□□□□ -0.14
ITGB5-212ENST00000608657 UACAQ9BZF9 1416 aa14.15□□□□□ -0.14
ITGB5-212ENST00000608657 PLB1Q6P1J6 1458 aa14.14□□□□□ -0.15
ITGB5-212ENST00000608657 UHRF1BP1LA0JNW5 1464 aa14.12□□□□□ -0.15
ITGB5-212ENST00000608657 HECW1Q76N89 1606 aa14.12□□□□□ -0.15
ITGB5-212ENST00000608657 PCF11O94913 1555 aaKnown RBP14.12□□□□□ -0.15
ITGB5-212ENST00000608657 ZCCHC11Q5TAX3 1644 aaKnown RBP14.08□□□□□ -0.16
ITGB5-212ENST00000608657 VPS8Q8N3P4 1428 aa14.07□□□□□ -0.16
ITGB5-212ENST00000608657 CASKIN1Q8WXD9 1431 aa14.07□□□□□ -0.16
ITGB5-212ENST00000608657 FYCO1Q9BQS8 1478 aa14.07□□□□□ -0.16
ITGB5-212ENST00000608657 NUP153P49790 1475 aaKnown RBP14.06□□□□□ -0.16
ITGB5-212ENST00000608657 KDM5BQ9UGL1 1544 aa14.05□□□□□ -0.16
ITGB5-212ENST00000608657 LRRIQ1Q96JM4 1722 aa14.05□□□□□ -0.16
ITGB5-212ENST00000608657 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
ITGB5-212ENST00000608657 ATP1B4Q9UN42 357 aaPredicted RBP14.05□□□□□ -0.16
ITGB5-212ENST00000608657 EPRSP07814 1512 aaKnown RBP14.02□□□□□ -0.16
ITGB5-212ENST00000608657 CCDC18Q5T9S5 1454 aa14.02□□□□□ -0.16
ITGB5-212ENST00000608657 ARID3CA6NKF2 412 aa14.02□□□□□ -0.17
ITGB5-212ENST00000608657 CDK13Q14004 1512 aaKnown RBP14.01□□□□□ -0.17
ITGB5-212ENST00000608657 MAPKBP1O60336 1514 aa14□□□□□ -0.17
ITGB5-212ENST00000608657 ATP10BO94823 1461 aa14□□□□□ -0.17
ITGB5-212ENST00000608657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
ITGB5-212ENST00000608657 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
ITGB5-212ENST00000608657 CFAP43Q8NDM7 1665 aa13.99□□□□□ -0.17
ITGB5-212ENST00000608657 ASXL2Q76L83 1435 aa13.96□□□□□ -0.18
ITGB5-212ENST00000608657 TIAM1Q13009 1591 aa13.96□□□□□ -0.18
ITGB5-212ENST00000608657 WDR7Q9Y4E6 1490 aa13.95□□□□□ -0.18
ITGB5-212ENST00000608657 CDK11AQ9UQ88 783 aaPredicted RBP13.93□□□□□ -0.18
ITGB5-212ENST00000608657 APLP2Q06481 763 aa13.92□□□□□ -0.18
ITGB5-212ENST00000608657 MAP3K1Q13233 1512 aa13.91□□□□□ -0.18
ITGB5-212ENST00000608657 PLEKHD1A6NEE1 506 aa13.91□□□□□ -0.18
ITGB5-212ENST00000608657 DIP2BQ9P265 1576 aa13.91□□□□□ -0.18
ITGB5-212ENST00000608657 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
ITGB5-212ENST00000608657 KIF13AQ9H1H9 1805 aa13.9□□□□□ -0.18
ITGB5-212ENST00000608657 KIF14Q15058 1648 aa13.9□□□□□ -0.19
ITGB5-212ENST00000608657 MAGI3Q5TCQ9 1506 aa13.9□□□□□ -0.19
ITGB5-212ENST00000608657 TROQ12816 1431 aaPredicted RBP13.89□□□□□ -0.19
ITGB5-212ENST00000608657 ABCC10Q5T3U5 1492 aa13.88□□□□□ -0.19
ITGB5-212ENST00000608657 MTUS2Q5JR59 1369 aa13.88□□□□□ -0.19
ITGB5-212ENST00000608657 GLI2P10070 1586 aa13.87□□□□□ -0.19
ITGB5-212ENST00000608657 KCNH8Q96L42 1107 aa13.86□□□□□ -0.19
ITGB5-212ENST00000608657 LRRC9Q6ZRR7 1453 aa13.86□□□□□ -0.19
ITGB5-212ENST00000608657 SUPT6HQ7KZ85 1726 aaKnown RBP13.85□□□□□ -0.19
ITGB5-212ENST00000608657 ABCA9Q8IUA7 1624 aa13.85□□□□□ -0.19
ITGB5-212ENST00000608657 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
ITGB5-212ENST00000608657 TTC37Q6PGP7 1564 aa13.83□□□□□ -0.19
ITGB5-212ENST00000608657 FAM69CQ0P6D2 419 aa13.83□□□□□ -0.2
ITGB5-212ENST00000608657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.83□□□□□ -0.2
ITGB5-212ENST00000608657 MAP3K4Q9Y6R4 1608 aa13.82□□□□□ -0.2
ITGB5-212ENST00000608657 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
ITGB5-212ENST00000608657 TSPOAP1O95153 1857 aa13.81□□□□□ -0.2
ITGB5-212ENST00000608657 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
ITGB5-212ENST00000608657 NCOA2Q15596 1464 aa13.79□□□□□ -0.2
ITGB5-212ENST00000608657 ITSN2Q9NZM3 1697 aa13.79□□□□□ -0.2
ITGB5-212ENST00000608657 PREX2Q70Z35 1606 aa13.78□□□□□ -0.2
ITGB5-212ENST00000608657 CDC42BPAQ5VT25 1732 aa13.78□□□□□ -0.2
ITGB5-212ENST00000608657 PPRC1Q5VV67 1664 aaKnown RBP13.77□□□□□ -0.21
ITGB5-212ENST00000608657 CD109Q6YHK3 1445 aa13.77□□□□□ -0.21
ITGB5-212ENST00000608657 CCNB3Q8WWL7 1395 aa13.75□□□□□ -0.21
ITGB5-212ENST00000608657 CDC42BPBQ9Y5S2 1711 aa13.75□□□□□ -0.21
ITGB5-212ENST00000608657 CFAP74Q9C0B2 1584 aa13.75□□□□□ -0.21
ITGB5-212ENST00000608657 ARAP3Q8WWN8 1544 aa13.74□□□□□ -0.21
ITGB5-212ENST00000608657 TEX14Q8IWB6 1497 aa13.74□□□□□ -0.21
ITGB5-212ENST00000608657 ARHGAP5Q13017 1502 aa13.73□□□□□ -0.21
ITGB5-212ENST00000608657 PLCH2O75038 1416 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms