RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
ITGB5-212ENST00000608657 CCDC180Q9P1Z9 1646 aa18.65■□□□□ 0.58
ITGB5-212ENST00000608657 ABCC9O60706 1549 aa17.94■□□□□ 0.46
ITGB5-212ENST00000608657 ZCCHC6Q5VYS8 1495 aaKnown RBP17.59■□□□□ 0.41
ITGB5-212ENST00000608657 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
ITGB5-212ENST00000608657 NACADO15069 1562 aa17.42■□□□□ 0.38
ITGB5-212ENST00000608657 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
ITGB5-212ENST00000608657 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
ITGB5-212ENST00000608657 MYO15BQ96JP2 1530 aa17.38■□□□□ 0.37
ITGB5-212ENST00000608657 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
ITGB5-212ENST00000608657 SCRIBQ14160 1630 aa17.02■□□□□ 0.31
ITGB5-212ENST00000608657 BICRAQ9NZM4 1560 aa16.84■□□□□ 0.29
ITGB5-212ENST00000608657 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.28
ITGB5-212ENST00000608657 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
ITGB5-212ENST00000608657 EIF4G1Q04637 1599 aaKnown RBP16.38■□□□□ 0.21
ITGB5-212ENST00000608657 CECR2Q9BXF3 1484 aa16.33■□□□□ 0.2
ITGB5-212ENST00000608657 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
ITGB5-212ENST00000608657 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
ITGB5-212ENST00000608657 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
ITGB5-212ENST00000608657 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.18
ITGB5-212ENST00000608657 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
ITGB5-212ENST00000608657 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
ITGB5-212ENST00000608657 PEG3Q9GZU2 1588 aa16.11■□□□□ 0.17
ITGB5-212ENST00000608657 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
ITGB5-212ENST00000608657 ATAD2BQ9ULI0 1458 aa16.1■□□□□ 0.17
ITGB5-212ENST00000608657 WIZO95785 1651 aa16.08■□□□□ 0.16
ITGB5-212ENST00000608657 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
ITGB5-212ENST00000608657 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
ITGB5-212ENST00000608657 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.15
ITGB5-212ENST00000608657 TOP2AP11388 1531 aaKnown RBP15.93■□□□□ 0.14
ITGB5-212ENST00000608657 SUPT5HO00267 1087 aaKnown RBP15.9■□□□□ 0.14
ITGB5-212ENST00000608657 CCDC88BA6NC98 1476 aa15.7■□□□□ 0.1
ITGB5-212ENST00000608657 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
ITGB5-212ENST00000608657 NESP48681 1621 aa15.59■□□□□ 0.09
ITGB5-212ENST00000608657 CADPSQ9ULU8 1353 aa15.58■□□□□ 0.08
ITGB5-212ENST00000608657 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
ITGB5-212ENST00000608657 CFTRP13569 1480 aa15.56■□□□□ 0.08
ITGB5-212ENST00000608657 KIF21AQ7Z4S6 1674 aa15.49■□□□□ 0.07
ITGB5-212ENST00000608657 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
ITGB5-212ENST00000608657 ERCC6Q03468 1493 aa15.46■□□□□ 0.07
ITGB5-212ENST00000608657 FANCD2Q9BXW9 1451 aa15.43■□□□□ 0.06
ITGB5-212ENST00000608657 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
ITGB5-212ENST00000608657 THOC2Q8NI27 1593 aaKnown RBP15.34■□□□□ 0.05
ITGB5-212ENST00000608657 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.04
ITGB5-212ENST00000608657 WDR62O43379 1518 aa15.27■□□□□ 0.03
ITGB5-212ENST00000608657 URB2Q14146 1524 aaKnown RBP15.26■□□□□ 0.03
ITGB5-212ENST00000608657 DNMBPQ6XZF7 1577 aa15.25■□□□□ 0.03
ITGB5-212ENST00000608657 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
ITGB5-212ENST00000608657 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
ITGB5-212ENST00000608657 WRNQ14191 1432 aaPredicted RBP eCLIP15.2■□□□□ 0.02
ITGB5-212ENST00000608657 CUX1P39880 1505 aa15.2■□□□□ 0.02
ITGB5-212ENST00000608657 CUX2O14529 1486 aa15.19■□□□□ 0.02
ITGB5-212ENST00000608657 BIVM-ERCC5R4GMW8 1640 aa15.17■□□□□ 0.02
ITGB5-212ENST00000608657 SYNJ1O43426 1573 aa15.17■□□□□ 0.02
ITGB5-212ENST00000608657 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
ITGB5-212ENST00000608657 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
ITGB5-212ENST00000608657 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
ITGB5-212ENST00000608657 IFT140Q96RY7 1462 aa15.07■□□□□ 0
ITGB5-212ENST00000608657 TARBP1Q13395 1621 aaKnown RBP15.04■□□□□ -0
ITGB5-212ENST00000608657 WDR97A6NE52 1622 aa15.03■□□□□ -0
ITGB5-212ENST00000608657 RAD54L2Q9Y4B4 1467 aa15.02■□□□□ -0
ITGB5-212ENST00000608657 SOGA1O94964 1423 aa15.02■□□□□ -0
ITGB5-212ENST00000608657 TRIM41Q8WV44 630 aa15□□□□□ -0.01
ITGB5-212ENST00000608657 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
ITGB5-212ENST00000608657 CHIC1Q5VXU3 224 aa14.97□□□□□ -0.01
ITGB5-212ENST00000608657 EIF4G3O43432 1585 aaKnown RBP14.97□□□□□ -0.01
ITGB5-212ENST00000608657 ZNF608Q9ULD9 1512 aaPredicted RBP14.95□□□□□ -0.02
ITGB5-212ENST00000608657 ABCA5Q8WWZ7 1642 aa14.92□□□□□ -0.02
ITGB5-212ENST00000608657 PBRM1Q86U86 1689 aa14.9□□□□□ -0.02
ITGB5-212ENST00000608657 TDRD9Q8NDG6 1382 aaKnown RBP14.9□□□□□ -0.02
ITGB5-212ENST00000608657 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.03
ITGB5-212ENST00000608657 GAPVD1Q14C86 1478 aa14.88□□□□□ -0.03
ITGB5-212ENST00000608657 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
ITGB5-212ENST00000608657 GRIN2BQ13224 1484 aa14.84□□□□□ -0.03
ITGB5-212ENST00000608657 ERICH3Q5RHP9 1530 aa14.81□□□□□ -0.04
ITGB5-212ENST00000608657 SNAPC4Q5SXM2 1469 aa14.8□□□□□ -0.04
ITGB5-212ENST00000608657 RUSC2Q8N2Y8 1516 aa14.78□□□□□ -0.04
ITGB5-212ENST00000608657 MAGI1Q96QZ7 1491 aaPredicted RBP14.78□□□□□ -0.04
ITGB5-212ENST00000608657 CUL7Q14999 1698 aa14.77□□□□□ -0.05
ITGB5-212ENST00000608657 ADAMTS12P58397 1594 aa14.77□□□□□ -0.05
ITGB5-212ENST00000608657 EEA1Q15075 1411 aa14.75□□□□□ -0.05
ITGB5-212ENST00000608657 CHD1O14646 1710 aa14.75□□□□□ -0.05
ITGB5-212ENST00000608657 SYNJ2O15056 1496 aa14.72□□□□□ -0.05
ITGB5-212ENST00000608657 IGF1RP08069 1367 aa14.72□□□□□ -0.05
ITGB5-212ENST00000608657 FHAD1B1AJZ9 1412 aa14.71□□□□□ -0.05
ITGB5-212ENST00000608657 FAM9AQ8IZU1 332 aaPredicted RBP14.69□□□□□ -0.06
ITGB5-212ENST00000608657 FBLN2P98095 1184 aa14.67□□□□□ -0.06
ITGB5-212ENST00000608657 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
ITGB5-212ENST00000608657 GRIN2AQ12879 1464 aa14.66□□□□□ -0.06
ITGB5-212ENST00000608657 CARMIL1Q5VZK9 1371 aa14.66□□□□□ -0.06
ITGB5-212ENST00000608657 CSRNP3Q8WYN3 585 aa14.66□□□□□ -0.06
ITGB5-212ENST00000608657 RAPGEF2Q9Y4G8 1499 aa14.63□□□□□ -0.07
ITGB5-212ENST00000608657 PRXQ9BXM0 1461 aa14.63□□□□□ -0.07
ITGB5-212ENST00000608657 KIF21BO75037 1637 aa14.62□□□□□ -0.07
ITGB5-212ENST00000608657 CEP170Q5SW79 1584 aa14.58□□□□□ -0.08
ITGB5-212ENST00000608657 NUP160Q12769 1436 aa14.57□□□□□ -0.08
ITGB5-212ENST00000608657 CTTNBP2Q8WZ74 1663 aa14.56□□□□□ -0.08
ITGB5-212ENST00000608657 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
ITGB5-212ENST00000608657 GOLGA3Q08378 1498 aa14.54□□□□□ -0.08
ITGB5-212ENST00000608657 CLASP1Q7Z460 1538 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms