RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PRG4Q92954 1404 aaPredicted RBP24.63■■□□□ 1.53
HDDC2-204ENST00000608295 JPH4Q96JJ6 628 aa24.57■■□□□ 1.52
HDDC2-204ENST00000608295 KIAA0586Q9BVV6 1533 aa24.56■■□□□ 1.52
HDDC2-204ENST00000608295 RAPGEF2Q9Y4G8 1499 aa24.53■■□□□ 1.52
HDDC2-204ENST00000608295 IQGAP2Q13576 1575 aa24.51■■□□□ 1.51
HDDC2-204ENST00000608295 TRHP20396 242 aaPredicted RBP24.5■■□□□ 1.51
HDDC2-204ENST00000608295 TTBK1Q5TCY1 1321 aaPredicted RBP24.46■■□□□ 1.51
HDDC2-204ENST00000608295 CTTNBP2Q8WZ74 1663 aa24.45■■□□□ 1.5
HDDC2-204ENST00000608295 FAM9AQ8IZU1 332 aaPredicted RBP24.4■■□□□ 1.5
HDDC2-204ENST00000608295 PRXQ9BXM0 1461 aa24.37■■□□□ 1.49
HDDC2-204ENST00000608295 ADCY10Q96PN6 1610 aa24.35■■□□□ 1.49
HDDC2-204ENST00000608295 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
HDDC2-204ENST00000608295 CARMIL2Q6F5E8 1435 aa24.32■■□□□ 1.48
HDDC2-204ENST00000608295 DISP1Q96F81 1524 aa24.31■■□□□ 1.48
HDDC2-204ENST00000608295 KIAA0556O60303 1618 aa24.3■■□□□ 1.48
HDDC2-204ENST00000608295 UGGT2Q9NYU1 1516 aa24.29■■□□□ 1.48
HDDC2-204ENST00000608295 CSRNP3Q8WYN3 585 aa24.28■■□□□ 1.48
HDDC2-204ENST00000608295 PTPRGP23470 1445 aa24.27■■□□□ 1.48
HDDC2-204ENST00000608295 TNIKQ9UKE5 1360 aa24.26■■□□□ 1.47
HDDC2-204ENST00000608295 EEA1Q15075 1411 aa24.25■■□□□ 1.47
HDDC2-204ENST00000608295 EHMT2Q96KQ7 1210 aa24.23■■□□□ 1.47
HDDC2-204ENST00000608295 KIF13AQ9H1H9 1805 aa24.19■■□□□ 1.46
HDDC2-204ENST00000608295 NPM1P06748 294 aaKnown RBP eCLIP24.16■■□□□ 1.46
HDDC2-204ENST00000608295 RANGAP1P46060 587 aaPredicted RBP24.16■■□□□ 1.46
HDDC2-204ENST00000608295 KIF21BO75037 1637 aa24.14■■□□□ 1.46
HDDC2-204ENST00000608295 MAPKBP1O60336 1514 aa24.12■■□□□ 1.45
HDDC2-204ENST00000608295 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
HDDC2-204ENST00000608295 ABCC2Q92887 1545 aa24.11■■□□□ 1.45
HDDC2-204ENST00000608295 UACAQ9BZF9 1416 aa24.1■■□□□ 1.45
HDDC2-204ENST00000608295 P3H3Q8IVL6 736 aa24.1■■□□□ 1.45
HDDC2-204ENST00000608295 DIP2BQ9P265 1576 aa24.09■■□□□ 1.45
HDDC2-204ENST00000608295 PLB1Q6P1J6 1458 aa24.07■■□□□ 1.44
HDDC2-204ENST00000608295 ZCCHC11Q5TAX3 1644 aaKnown RBP24.06■■□□□ 1.44
HDDC2-204ENST00000608295 UHRF1BP1LA0JNW5 1464 aa24.04■■□□□ 1.44
HDDC2-204ENST00000608295 SAMD9Q5K651 1589 aa24.03■■□□□ 1.44
HDDC2-204ENST00000608295 TSPOAP1O95153 1857 aa24.03■■□□□ 1.44
HDDC2-204ENST00000608295 ABCC10Q5T3U5 1492 aa24.03■■□□□ 1.44
HDDC2-204ENST00000608295 FAM69CQ0P6D2 419 aa24.02■■□□□ 1.44
HDDC2-204ENST00000608295 ASXL2Q76L83 1435 aa23.99■■□□□ 1.43
HDDC2-204ENST00000608295 ABCA8O94911 1581 aa23.99■■□□□ 1.43
HDDC2-204ENST00000608295 ARID3CA6NKF2 412 aa23.97■■□□□ 1.43
HDDC2-204ENST00000608295 KDM5BQ9UGL1 1544 aa23.95■■□□□ 1.43
HDDC2-204ENST00000608295 FHOD3Q2V2M9 1422 aa23.95■■□□□ 1.42
HDDC2-204ENST00000608295 UBTFP17480 764 aaKnown RBP23.94■■□□□ 1.42
HDDC2-204ENST00000608295 RAPGEF6Q8TEU7 1601 aa23.88■■□□□ 1.41
HDDC2-204ENST00000608295 EFCAB5A4FU69 1503 aa23.86■■□□□ 1.41
HDDC2-204ENST00000608295 WDR7Q9Y4E6 1490 aa23.84■■□□□ 1.41
HDDC2-204ENST00000608295 EPRSP07814 1512 aaKnown RBP23.84■■□□□ 1.41
HDDC2-204ENST00000608295 PPRC1Q5VV67 1664 aaKnown RBP23.82■■□□□ 1.4
HDDC2-204ENST00000608295 GLI2P10070 1586 aa23.8■■□□□ 1.4
HDDC2-204ENST00000608295 KDM6BO15054 1643 aa23.77■■□□□ 1.4
HDDC2-204ENST00000608295 MAP3K4Q9Y6R4 1608 aa23.77■■□□□ 1.4
HDDC2-204ENST00000608295 ATP10BO94823 1461 aa23.75■■□□□ 1.39
HDDC2-204ENST00000608295 KCNH8Q96L42 1107 aa23.75■■□□□ 1.39
HDDC2-204ENST00000608295 NUP153P49790 1475 aaKnown RBP23.75■■□□□ 1.39
HDDC2-204ENST00000608295 ARHGAP35Q9NRY4 1499 aa23.75■■□□□ 1.39
HDDC2-204ENST00000608295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
HDDC2-204ENST00000608295 HNRNPUL2Q1KMD3 747 aaKnown RBP23.74■■□□□ 1.39
HDDC2-204ENST00000608295 CFAP43Q8NDM7 1665 aa23.68■■□□□ 1.38
HDDC2-204ENST00000608295 CDK13Q14004 1512 aaKnown RBP23.67■■□□□ 1.38
HDDC2-204ENST00000608295 ATP1B4Q9UN42 357 aaPredicted RBP23.66■■□□□ 1.38
HDDC2-204ENST00000608295 HECW1Q76N89 1606 aa23.63■■□□□ 1.37
HDDC2-204ENST00000608295 TEX14Q8IWB6 1497 aa23.61■■□□□ 1.37
HDDC2-204ENST00000608295 CD109Q6YHK3 1445 aa23.6■■□□□ 1.37
HDDC2-204ENST00000608295 FMN1Q68DA7 1419 aa23.59■■□□□ 1.37
HDDC2-204ENST00000608295 PCF11O94913 1555 aaKnown RBP23.59■■□□□ 1.37
HDDC2-204ENST00000608295 LRRIQ1Q96JM4 1722 aa23.58■■□□□ 1.37
HDDC2-204ENST00000608295 ABCA9Q8IUA7 1624 aa23.58■■□□□ 1.36
HDDC2-204ENST00000608295 CLIP1P30622 1438 aa23.55■■□□□ 1.36
HDDC2-204ENST00000608295 COL17A1Q9UMD9 1497 aaPredicted RBP23.55■■□□□ 1.36
HDDC2-204ENST00000608295 MAGI3Q5TCQ9 1506 aa23.53■■□□□ 1.36
HDDC2-204ENST00000608295 TTC37Q6PGP7 1564 aa23.51■■□□□ 1.35
HDDC2-204ENST00000608295 PLEKHD1A6NEE1 506 aa23.49■■□□□ 1.35
HDDC2-204ENST00000608295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.46■■□□□ 1.355e-7■■■□□ 15.7
HDDC2-204ENST00000608295 KIF14Q15058 1648 aa23.44■■□□□ 1.34
HDDC2-204ENST00000608295 CEP162Q5TB80 1403 aa23.42■■□□□ 1.34
HDDC2-204ENST00000608295 LOC105371045A0A1W2PR82 267 aa23.41■■□□□ 1.34
HDDC2-204ENST00000608295 CASKIN1Q8WXD9 1431 aa23.4■■□□□ 1.34
HDDC2-204ENST00000608295 FYCO1Q9BQS8 1478 aa23.38■■□□□ 1.33
HDDC2-204ENST00000608295 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
HDDC2-204ENST00000608295 MYO5CQ9NQX4 1742 aa23.36■■□□□ 1.33
HDDC2-204ENST00000608295 CCDC18Q5T9S5 1454 aa23.35■■□□□ 1.33
HDDC2-204ENST00000608295 TROQ12816 1431 aaPredicted RBP23.33■■□□□ 1.33
HDDC2-204ENST00000608295 CFAP74Q9C0B2 1584 aa23.33■■□□□ 1.33
HDDC2-204ENST00000608295 FANCAO15360 1455 aa23.32■■□□□ 1.32
HDDC2-204ENST00000608295 NEO1Q92859 1461 aa23.32■■□□□ 1.32
HDDC2-204ENST00000608295 FRMPD1Q5SYB0 1578 aa23.31■■□□□ 1.32
HDDC2-204ENST00000608295 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
HDDC2-204ENST00000608295 ARAP3Q8WWN8 1544 aa23.31■■□□□ 1.32
HDDC2-204ENST00000608295 RAPGEF3O95398 923 aa23.28■■□□□ 1.32
HDDC2-204ENST00000608295 AKNAQ7Z591 1439 aa23.25■■□□□ 1.31
HDDC2-204ENST00000608295 RICTORQ6R327 1708 aa23.25■■□□□ 1.31
HDDC2-204ENST00000608295 ADGRL1O94910 1474 aa23.24■■□□□ 1.31
HDDC2-204ENST00000608295 ARHGAP5Q13017 1502 aa23.24■■□□□ 1.31
HDDC2-204ENST00000608295 KDM4FA0A1W2PPD8 638 aa23.22■■□□□ 1.31
HDDC2-204ENST00000608295 PLCH2O75038 1416 aa23.22■■□□□ 1.31
HDDC2-204ENST00000608295 CDC42BPBQ9Y5S2 1711 aa23.22■■□□□ 1.31
HDDC2-204ENST00000608295 PHLDB1Q86UU1 1377 aa23.21■■□□□ 1.31
HDDC2-204ENST00000608295 DENND4BO75064 1496 aaPredicted RBP23.21■■□□□ 1.31
HDDC2-204ENST00000608295 PREX2Q70Z35 1606 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms