RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 IGF1RP08069 1367 aa31.76■■■□□ 2.67
CCDC12-213ENST00000605875 KIF13AQ9H1H9 1805 aa31.75■■■□□ 2.67
CCDC12-213ENST00000605875 KIF27Q86VH2 1401 aa31.74■■■□□ 2.67
CCDC12-213ENST00000605875 CUL7Q14999 1698 aa31.69■■■□□ 2.66
CCDC12-213ENST00000605875 KIAA0586Q9BVV6 1533 aa31.69■■■□□ 2.66
CCDC12-213ENST00000605875 NPM1P06748 294 aaKnown RBP eCLIP31.68■■■□□ 2.66
CCDC12-213ENST00000605875 FAM69CQ0P6D2 419 aa31.6■■■□□ 2.65
CCDC12-213ENST00000605875 ADCY10Q96PN6 1610 aa31.6■■■□□ 2.65
CCDC12-213ENST00000605875 ABCC10Q5T3U5 1492 aa31.59■■■□□ 2.65
CCDC12-213ENST00000605875 MAPKBP1O60336 1514 aa31.57■■■□□ 2.64
CCDC12-213ENST00000605875 CARMIL1Q5VZK9 1371 aa31.55■■■□□ 2.64
CCDC12-213ENST00000605875 DIP2BQ9P265 1576 aa31.49■■■□□ 2.63
CCDC12-213ENST00000605875 PTPRGP23470 1445 aa31.45■■■□□ 2.63
CCDC12-213ENST00000605875 TTBK1Q5TCY1 1321 aaPredicted RBP31.42■■■□□ 2.62
CCDC12-213ENST00000605875 CARMIL2Q6F5E8 1435 aa31.4■■■□□ 2.62
CCDC12-213ENST00000605875 TNIKQ9UKE5 1360 aa31.38■■■□□ 2.61
CCDC12-213ENST00000605875 IQGAP2Q13576 1575 aa31.36■■■□□ 2.61
CCDC12-213ENST00000605875 TSPOAP1O95153 1857 aa31.33■■■□□ 2.61
CCDC12-213ENST00000605875 ABCC2Q92887 1545 aa31.28■■■□□ 2.6
CCDC12-213ENST00000605875 KDM6BO15054 1643 aa31.27■■■□□ 2.6
CCDC12-213ENST00000605875 RAPGEF2Q9Y4G8 1499 aa31.24■■■□□ 2.59
CCDC12-213ENST00000605875 DISP1Q96F81 1524 aa31.23■■■□□ 2.59
CCDC12-213ENST00000605875 UHRF1BP1LA0JNW5 1464 aa31.21■■■□□ 2.59
CCDC12-213ENST00000605875 ASXL2Q76L83 1435 aa31.19■■■□□ 2.58
CCDC12-213ENST00000605875 UACAQ9BZF9 1416 aa31.19■■■□□ 2.58
CCDC12-213ENST00000605875 PLB1Q6P1J6 1458 aa31.19■■■□□ 2.58
CCDC12-213ENST00000605875 UGGT2Q9NYU1 1516 aa31.15■■■□□ 2.58
CCDC12-213ENST00000605875 GLI2P10070 1586 aa31.12■■■□□ 2.57
CCDC12-213ENST00000605875 KIAA0556O60303 1618 aa31.08■■■□□ 2.57
CCDC12-213ENST00000605875 PPRC1Q5VV67 1664 aaKnown RBP31.06■■■□□ 2.56
CCDC12-213ENST00000605875 KDM5BQ9UGL1 1544 aa31.06■■■□□ 2.56
CCDC12-213ENST00000605875 KDM4FA0A1W2PPD8 638 aa31.04■■■□□ 2.56
CCDC12-213ENST00000605875 ZCCHC11Q5TAX3 1644 aaKnown RBP31.01■■■□□ 2.55
CCDC12-213ENST00000605875 EPRSP07814 1512 aaKnown RBP31■■■□□ 2.55
CCDC12-213ENST00000605875 CTTNBP2Q8WZ74 1663 aa30.99■■■□□ 2.55
CCDC12-213ENST00000605875 MAP3K4Q9Y6R4 1608 aa30.95■■■□□ 2.54
CCDC12-213ENST00000605875 GOLGA3Q08378 1498 aa30.9■■■□□ 2.54
CCDC12-213ENST00000605875 TEX14Q8IWB6 1497 aa30.88■■■□□ 2.53
CCDC12-213ENST00000605875 PRXQ9BXM0 1461 aa30.86■■■□□ 2.53
CCDC12-213ENST00000605875 COL17A1Q9UMD9 1497 aaPredicted RBP30.86■■■□□ 2.53
CCDC12-213ENST00000605875 WDR7Q9Y4E6 1490 aa30.86■■■□□ 2.53
CCDC12-213ENST00000605875 ABCA8O94911 1581 aa30.8■■■□□ 2.52
CCDC12-213ENST00000605875 KCNH8Q96L42 1107 aa30.75■■■□□ 2.51
CCDC12-213ENST00000605875 ADGRL1O94910 1474 aa30.75■■■□□ 2.51
CCDC12-213ENST00000605875 CD109Q6YHK3 1445 aa30.71■■■□□ 2.51
CCDC12-213ENST00000605875 CFAP43Q8NDM7 1665 aa30.7■■■□□ 2.5
CCDC12-213ENST00000605875 FAM9AQ8IZU1 332 aaPredicted RBP30.68■■■□□ 2.5
CCDC12-213ENST00000605875 MAGI3Q5TCQ9 1506 aa30.68■■■□□ 2.5
CCDC12-213ENST00000605875 P3H3Q8IVL6 736 aa30.66■■■□□ 2.5
CCDC12-213ENST00000605875 CSRNP3Q8WYN3 585 aa30.62■■■□□ 2.49
CCDC12-213ENST00000605875 ARID3CA6NKF2 412 aa30.61■■■□□ 2.49
CCDC12-213ENST00000605875 ATP10BO94823 1461 aa30.56■■■□□ 2.48
CCDC12-213ENST00000605875 SAMD9Q5K651 1589 aa30.52■■■□□ 2.48
CCDC12-213ENST00000605875 EEA1Q15075 1411 aa30.49■■■□□ 2.47
CCDC12-213ENST00000605875 RAPGEF6Q8TEU7 1601 aa30.46■■■□□ 2.47
CCDC12-213ENST00000605875 ARAP3Q8WWN8 1544 aa30.44■■■□□ 2.46
CCDC12-213ENST00000605875 ABCA9Q8IUA7 1624 aa30.43■■■□□ 2.46
CCDC12-213ENST00000605875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.41■■■□□ 2.46
CCDC12-213ENST00000605875 RANGAP1P46060 587 aaPredicted RBP30.41■■■□□ 2.46
CCDC12-213ENST00000605875 HNRNPUL2Q1KMD3 747 aaKnown RBP30.41■■■□□ 2.46
CCDC12-213ENST00000605875 KIF21BO75037 1637 aa30.38■■■□□ 2.45
CCDC12-213ENST00000605875 PHLDB1Q86UU1 1377 aa30.37■■■□□ 2.45
CCDC12-213ENST00000605875 HECW2Q9P2P5 1572 aa30.37■■■□□ 2.45
CCDC12-213ENST00000605875 NUP153P49790 1475 aaKnown RBP30.33■■■□□ 2.45
CCDC12-213ENST00000605875 FHOD3Q2V2M9 1422 aa30.33■■■□□ 2.45
CCDC12-213ENST00000605875 CHIC1Q5VXU3 224 aa30.32■■■□□ 2.44
CCDC12-213ENST00000605875 NEO1Q92859 1461 aa30.29■■■□□ 2.44
CCDC12-213ENST00000605875 RAPGEF3O95398 923 aa30.28■■■□□ 2.44
CCDC12-213ENST00000605875 ILDR1Q86SU0 546 aaPredicted RBP30.26■■■□□ 2.43
CCDC12-213ENST00000605875 PLEKHD1A6NEE1 506 aa30.24■■■□□ 2.43
CCDC12-213ENST00000605875 EFCAB5A4FU69 1503 aa30.18■■■□□ 2.42
CCDC12-213ENST00000605875 FRMPD1Q5SYB0 1578 aa30.16■■■□□ 2.42
CCDC12-213ENST00000605875 ADAMTSL3P82987 1691 aa30.14■■■□□ 2.42
CCDC12-213ENST00000605875 ARID4BQ4LE39 1312 aaPredicted RBP30.1■■■□□ 2.41
CCDC12-213ENST00000605875 DENND4BO75064 1496 aaPredicted RBP30.09■■■□□ 2.41
CCDC12-213ENST00000605875 PTPRMP28827 1452 aa30.09■■■□□ 2.41
CCDC12-213ENST00000605875 AKNAQ7Z591 1439 aa30.09■■■□□ 2.41
CCDC12-213ENST00000605875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.09■■■□□ 2.412e-6■■■□□ 16.6
CCDC12-213ENST00000605875 FANCAO15360 1455 aa30.07■■■□□ 2.4
CCDC12-213ENST00000605875 BCORL1Q5H9F3 1711 aa30.07■■■□□ 2.4
CCDC12-213ENST00000605875 CFAP74Q9C0B2 1584 aa30.06■■■□□ 2.4
CCDC12-213ENST00000605875 RICTORQ6R327 1708 aa30.05■■■□□ 2.4
CCDC12-213ENST00000605875 EHMT2Q96KQ7 1210 aa30.05■■■□□ 2.4
CCDC12-213ENST00000605875 TTC37Q6PGP7 1564 aa30.04■■■□□ 2.4
CCDC12-213ENST00000605875 CDK13Q14004 1512 aaKnown RBP30.03■■■□□ 2.4
CCDC12-213ENST00000605875 UBTFP17480 764 aaKnown RBP30.03■■■□□ 2.4
CCDC12-213ENST00000605875 ARHGEF40Q8TER5 1519 aa30.01■■■□□ 2.4
CCDC12-213ENST00000605875 MADDQ8WXG6 1647 aa30■■■□□ 2.39
CCDC12-213ENST00000605875 ATP1B4Q9UN42 357 aaPredicted RBP29.97■■■□□ 2.39
CCDC12-213ENST00000605875 FMN1Q68DA7 1419 aa29.94■■■□□ 2.38
CCDC12-213ENST00000605875 ZMYM4Q5VZL5 1548 aa29.92■■■□□ 2.38
CCDC12-213ENST00000605875 PLCH2O75038 1416 aa29.91■■■□□ 2.38
CCDC12-213ENST00000605875 HECW1Q76N89 1606 aa29.91■■■□□ 2.38
CCDC12-213ENST00000605875 ARHGAP35Q9NRY4 1499 aa29.91■■■□□ 2.38
CCDC12-213ENST00000605875 RIMS1Q86UR5 1692 aaKnown RBP29.9■■■□□ 2.38
CCDC12-213ENST00000605875 ZFYVE16Q7Z3T8 1539 aa29.9■■■□□ 2.38
CCDC12-213ENST00000605875 YEATS2Q9ULM3 1422 aa29.88■■■□□ 2.37
CCDC12-213ENST00000605875 POGZQ7Z3K3 1410 aa29.88■■■□□ 2.37
CCDC12-213ENST00000605875 SCAPERQ9BY12 1400 aa29.88■■■□□ 2.37
CCDC12-213ENST00000605875 MAGI2Q86UL8 1455 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms