RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 NISCHQ9Y2I1 1504 aa45.47■■■■■ 4.87
CCDC12-213ENST00000605875 ABCC9O60706 1549 aa40.98■■■■■ 4.15
CCDC12-213ENST00000605875 CCDC180Q9P1Z9 1646 aa40.84■■■■■ 4.13
CCDC12-213ENST00000605875 RB1CC1Q8TDY2 1594 aa38.95■■■■□ 3.83
CCDC12-213ENST00000605875 NACADO15069 1562 aa38.65■■■■□ 3.78
CCDC12-213ENST00000605875 DNAJC5BQ9UF47 199 aa38.55■■■■□ 3.76
CCDC12-213ENST00000605875 DCAF8L2P0C7V8 631 aa38.5■■■■□ 3.75
CCDC12-213ENST00000605875 PABPN1Q86U42 306 aaKnown RBP eCLIP38.16■■■■□ 3.7
CCDC12-213ENST00000605875 UNC13AQ9UPW8 1703 aa38.07■■■■□ 3.69
CCDC12-213ENST00000605875 MYO15BQ96JP2 1530 aa38.06■■■■□ 3.68
CCDC12-213ENST00000605875 BICRAQ9NZM4 1560 aa37.8■■■■□ 3.64
CCDC12-213ENST00000605875 ZCCHC6Q5VYS8 1495 aaKnown RBP37.64■■■■□ 3.62
CCDC12-213ENST00000605875 DCAF1Q9Y4B6 1507 aa37.53■■■■□ 3.6
CCDC12-213ENST00000605875 SHROOM4Q9ULL8 1493 aa37.26■■■■□ 3.56
CCDC12-213ENST00000605875 SCRIBQ14160 1630 aa37.22■■■■□ 3.55
CCDC12-213ENST00000605875 CC2D2AQ9P2K1 1620 aa37.01■■■■□ 3.52
CCDC12-213ENST00000605875 CECR2Q9BXF3 1484 aa36.93■■■■□ 3.5
CCDC12-213ENST00000605875 EIF4G1Q04637 1599 aaKnown RBP36.89■■■■□ 3.5
CCDC12-213ENST00000605875 NCAPD3P42695 1498 aa35.68■■■■□ 3.3
CCDC12-213ENST00000605875 ATAD2BQ9ULI0 1458 aa35.56■■■■□ 3.28
CCDC12-213ENST00000605875 DNAJC5Q9H3Z4 198 aa35.49■■■■□ 3.27
CCDC12-213ENST00000605875 SMARCA4P51532 1647 aa35.49■■■■□ 3.27
CCDC12-213ENST00000605875 SMARCA2P51531 1590 aa35.45■■■■□ 3.27
CCDC12-213ENST00000605875 ERCC6Q03468 1493 aa35.4■■■■□ 3.26
CCDC12-213ENST00000605875 HMGXB3Q12766 1538 aa35.39■■■■□ 3.26
CCDC12-213ENST00000605875 CUX2O14529 1486 aa35.35■■■■□ 3.25
CCDC12-213ENST00000605875 BAZ1AQ9NRL2 1556 aaPredicted RBP35.3■■■■□ 3.24
CCDC12-213ENST00000605875 BAZ1BQ9UIG0 1483 aaKnown RBP35.22■■■■□ 3.23
CCDC12-213ENST00000605875 NESP48681 1621 aa35.17■■■■□ 3.22
CCDC12-213ENST00000605875 PEG3Q9GZU2 1588 aa35.13■■■■□ 3.21
CCDC12-213ENST00000605875 MROH2BQ7Z745 1585 aa35.04■■■■□ 3.2
CCDC12-213ENST00000605875 LAMC3Q9Y6N6 1575 aa34.9■■■■□ 3.18
CCDC12-213ENST00000605875 THOC2Q8NI27 1593 aaKnown RBP34.82■■■■□ 3.16
CCDC12-213ENST00000605875 PDS5BQ9NTI5 1447 aa34.72■■■■□ 3.15
CCDC12-213ENST00000605875 KIF21AQ7Z4S6 1674 aa34.71■■■■□ 3.15
CCDC12-213ENST00000605875 WIZO95785 1651 aa34.62■■■■□ 3.13
CCDC12-213ENST00000605875 CADPSQ9ULU8 1353 aa34.61■■■■□ 3.13
CCDC12-213ENST00000605875 MRC2Q9UBG0 1479 aa34.41■■■■□ 3.1
CCDC12-213ENST00000605875 WDR62O43379 1518 aa34.31■■■■□ 3.08
CCDC12-213ENST00000605875 RSF1Q96T23 1441 aaPredicted RBP34.27■■■■□ 3.08
CCDC12-213ENST00000605875 CEP164Q9UPV0 1460 aa34.26■■■■□ 3.07
CCDC12-213ENST00000605875 FANCD2Q9BXW9 1451 aa34.2■■■■□ 3.07
CCDC12-213ENST00000605875 CFTRP13569 1480 aa34.17■■■■□ 3.06
CCDC12-213ENST00000605875 TOP2AP11388 1531 aaKnown RBP34.16■■■■□ 3.06
CCDC12-213ENST00000605875 URB2Q14146 1524 aaKnown RBP33.93■■■■□ 3.02
CCDC12-213ENST00000605875 TRIM41Q8WV44 630 aa33.92■■■■□ 3.02
CCDC12-213ENST00000605875 PRDM2Q13029 1718 aa33.84■■■■□ 3.01
CCDC12-213ENST00000605875 CCDC88BA6NC98 1476 aa33.79■■■■□ 3
CCDC12-213ENST00000605875 OSCARQ8IYS5 282 aa33.76■■■□□ 2.99
CCDC12-213ENST00000605875 IFT140Q96RY7 1462 aa33.57■■■□□ 2.97
CCDC12-213ENST00000605875 TOPBP1Q92547 1522 aa33.54■■■□□ 2.96
CCDC12-213ENST00000605875 ZNF608Q9ULD9 1512 aaPredicted RBP33.53■■■□□ 2.96
CCDC12-213ENST00000605875 ABCC8Q09428 1581 aa33.47■■■□□ 2.95
CCDC12-213ENST00000605875 DNMBPQ6XZF7 1577 aa33.41■■■□□ 2.94
CCDC12-213ENST00000605875 EIF4G3O43432 1585 aaKnown RBP33.33■■■□□ 2.93
CCDC12-213ENST00000605875 RIMBP3CA6NJZ7 1639 aa33.31■■■□□ 2.92
CCDC12-213ENST00000605875 RIMBP3BA6NNM3 1639 aa33.31■■■□□ 2.92
CCDC12-213ENST00000605875 RIMBP3Q9UFD9 1639 aa33.31■■■□□ 2.92
CCDC12-213ENST00000605875 TARBP1Q13395 1621 aaKnown RBP33.25■■■□□ 2.91
CCDC12-213ENST00000605875 AQRO60306 1485 aaKnown RBP eCLIP33.24■■■□□ 2.917e-7■□□□□ 11.3
CCDC12-213ENST00000605875 POLA1P09884 1462 aaPredicted RBP33.19■■■□□ 2.9
CCDC12-213ENST00000605875 ARHGEF11O15085 1522 aa33.18■■■□□ 2.9
CCDC12-213ENST00000605875 CHD1O14646 1710 aa33.13■■■□□ 2.89
CCDC12-213ENST00000605875 RAD54L2Q9Y4B4 1467 aa33.09■■■□□ 2.89
CCDC12-213ENST00000605875 FBLN2P98095 1184 aa33.07■■■□□ 2.88
CCDC12-213ENST00000605875 SOGA1O94964 1423 aa33.06■■■□□ 2.88
CCDC12-213ENST00000605875 TDRD9Q8NDG6 1382 aaKnown RBP33.01■■■□□ 2.88
CCDC12-213ENST00000605875 CYB5RLQ6IPT4 315 aa32.99■■■□□ 2.87
CCDC12-213ENST00000605875 FGD5Q6ZNL6 1462 aa32.97■■■□□ 2.87
CCDC12-213ENST00000605875 CUX1P39880 1505 aa32.92■■■□□ 2.86
CCDC12-213ENST00000605875 WDR97A6NE52 1622 aa32.9■■■□□ 2.86
CCDC12-213ENST00000605875 SNAPC4Q5SXM2 1469 aa32.87■■■□□ 2.85
CCDC12-213ENST00000605875 ARAP1Q96P48 1450 aa32.85■■■□□ 2.85
CCDC12-213ENST00000605875 CHMP7Q8WUX9 453 aaPredicted RBP32.8■■■□□ 2.84
CCDC12-213ENST00000605875 MAGI1Q96QZ7 1491 aaPredicted RBP32.78■■■□□ 2.84
CCDC12-213ENST00000605875 GRIN2BQ13224 1484 aa32.77■■■□□ 2.84
CCDC12-213ENST00000605875 SUPT5HO00267 1087 aaKnown RBP32.76■■■□□ 2.83
CCDC12-213ENST00000605875 CLASP1Q7Z460 1538 aa32.72■■■□□ 2.83
CCDC12-213ENST00000605875 SYNJ1O43426 1573 aa32.71■■■□□ 2.83
CCDC12-213ENST00000605875 SYNJ2O15056 1496 aa32.67■■■□□ 2.82
CCDC12-213ENST00000605875 TRHP20396 242 aaPredicted RBP32.67■■■□□ 2.82
CCDC12-213ENST00000605875 GAPVD1Q14C86 1478 aa32.64■■■□□ 2.82
CCDC12-213ENST00000605875 PBRM1Q86U86 1689 aa32.64■■■□□ 2.82
CCDC12-213ENST00000605875 ABCA10Q8WWZ4 1543 aa32.59■■■□□ 2.81
CCDC12-213ENST00000605875 ABCA5Q8WWZ7 1642 aa32.54■■■□□ 2.8
CCDC12-213ENST00000605875 WRNQ14191 1432 aaPredicted RBP eCLIP32.44■■■□□ 2.78
CCDC12-213ENST00000605875 TOP2BQ02880 1626 aa32.37■■■□□ 2.77
CCDC12-213ENST00000605875 BIVM-ERCC5R4GMW8 1640 aa32.37■■■□□ 2.77
CCDC12-213ENST00000605875 GRIN2AQ12879 1464 aa32.35■■■□□ 2.77
CCDC12-213ENST00000605875 ADAMTS12P58397 1594 aa32.31■■■□□ 2.76
CCDC12-213ENST00000605875 NUP160Q12769 1436 aa32.24■■■□□ 2.75
CCDC12-213ENST00000605875 CEP170Q5SW79 1584 aa32.24■■■□□ 2.75
CCDC12-213ENST00000605875 FHAD1B1AJZ9 1412 aa32.23■■■□□ 2.75
CCDC12-213ENST00000605875 ERCC6L2Q5T890 1561 aa32.22■■■□□ 2.75
CCDC12-213ENST00000605875 ERICH3Q5RHP9 1530 aa32.18■■■□□ 2.74
CCDC12-213ENST00000605875 SHROOM2Q13796 1616 aa32.11■■■□□ 2.73
CCDC12-213ENST00000605875 PRG4Q92954 1404 aaPredicted RBP31.96■■■□□ 2.71
CCDC12-213ENST00000605875 JPH4Q96JJ6 628 aa31.95■■■□□ 2.71
CCDC12-213ENST00000605875 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
CCDC12-213ENST00000605875 AEBP2Q6ZN18 517 aaPredicted RBP31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms