RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 JPH4Q96JJ6 628 aa24.39■■□□□ 1.49
TUBE1-208ENST00000604743 PRG4Q92954 1404 aaPredicted RBP24.35■■□□□ 1.49
TUBE1-208ENST00000604743 KIAA0586Q9BVV6 1533 aa24.33■■□□□ 1.49
TUBE1-208ENST00000604743 RAPGEF2Q9Y4G8 1499 aa24.3■■□□□ 1.48
TUBE1-208ENST00000604743 TRHP20396 242 aaPredicted RBP24.21■■□□□ 1.47
TUBE1-208ENST00000604743 IQGAP2Q13576 1575 aa24.2■■□□□ 1.47
TUBE1-208ENST00000604743 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
TUBE1-208ENST00000604743 FAM9AQ8IZU1 332 aaPredicted RBP24.16■■□□□ 1.46
TUBE1-208ENST00000604743 CSRNP3Q8WYN3 585 aa24.15■■□□□ 1.46
TUBE1-208ENST00000604743 TTBK1Q5TCY1 1321 aaPredicted RBP24.14■■□□□ 1.46
TUBE1-208ENST00000604743 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
TUBE1-208ENST00000604743 CTTNBP2Q8WZ74 1663 aa24.12■■□□□ 1.45
TUBE1-208ENST00000604743 CARMIL2Q6F5E8 1435 aa24.1■■□□□ 1.45
TUBE1-208ENST00000604743 EEA1Q15075 1411 aa24.08■■□□□ 1.44
TUBE1-208ENST00000604743 PTPRGP23470 1445 aa24.04■■□□□ 1.44
TUBE1-208ENST00000604743 UGGT2Q9NYU1 1516 aa24.03■■□□□ 1.44
TUBE1-208ENST00000604743 TNIKQ9UKE5 1360 aa24.03■■□□□ 1.44
TUBE1-208ENST00000604743 DISP1Q96F81 1524 aa24.02■■□□□ 1.44
TUBE1-208ENST00000604743 ADCY10Q96PN6 1610 aa24■■□□□ 1.43
TUBE1-208ENST00000604743 NPM1P06748 294 aaKnown RBP eCLIP23.99■■□□□ 1.43
TUBE1-208ENST00000604743 KIAA0556O60303 1618 aa23.97■■□□□ 1.43
TUBE1-208ENST00000604743 EHMT2Q96KQ7 1210 aa23.92■■□□□ 1.42
TUBE1-208ENST00000604743 GOLGA3Q08378 1498 aa23.9■■□□□ 1.42
TUBE1-208ENST00000604743 RANGAP1P46060 587 aaPredicted RBP23.88■■□□□ 1.41
TUBE1-208ENST00000604743 KIF21BO75037 1637 aa23.88■■□□□ 1.41
TUBE1-208ENST00000604743 UACAQ9BZF9 1416 aa23.86■■□□□ 1.41
TUBE1-208ENST00000604743 P3H3Q8IVL6 736 aa23.86■■□□□ 1.41
TUBE1-208ENST00000604743 KIF13AQ9H1H9 1805 aa23.84■■□□□ 1.41
TUBE1-208ENST00000604743 MAPKBP1O60336 1514 aa23.83■■□□□ 1.41
TUBE1-208ENST00000604743 ABCC2Q92887 1545 aa23.81■■□□□ 1.4
TUBE1-208ENST00000604743 UHRF1BP1LA0JNW5 1464 aa23.81■■□□□ 1.4
TUBE1-208ENST00000604743 FAM69CQ0P6D2 419 aa23.79■■□□□ 1.4
TUBE1-208ENST00000604743 UBTFP17480 764 aaKnown RBP23.78■■□□□ 1.4
TUBE1-208ENST00000604743 PLB1Q6P1J6 1458 aa23.76■■□□□ 1.39
TUBE1-208ENST00000604743 ABCC10Q5T3U5 1492 aa23.75■■□□□ 1.39
TUBE1-208ENST00000604743 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
TUBE1-208ENST00000604743 DIP2BQ9P265 1576 aa23.73■■□□□ 1.39
TUBE1-208ENST00000604743 ZCCHC11Q5TAX3 1644 aaKnown RBP23.72■■□□□ 1.39
TUBE1-208ENST00000604743 ABCA8O94911 1581 aa23.7■■□□□ 1.38
TUBE1-208ENST00000604743 KDM5BQ9UGL1 1544 aa23.7■■□□□ 1.38
TUBE1-208ENST00000604743 ASXL2Q76L83 1435 aa23.7■■□□□ 1.38
TUBE1-208ENST00000604743 TSPOAP1O95153 1857 aa23.68■■□□□ 1.38
TUBE1-208ENST00000604743 ARID3CA6NKF2 412 aa23.65■■□□□ 1.38
TUBE1-208ENST00000604743 FHOD3Q2V2M9 1422 aa23.65■■□□□ 1.38
TUBE1-208ENST00000604743 EFCAB5A4FU69 1503 aa23.6■■□□□ 1.37
TUBE1-208ENST00000604743 RAPGEF6Q8TEU7 1601 aa23.59■■□□□ 1.37
TUBE1-208ENST00000604743 EPRSP07814 1512 aaKnown RBP23.55■■□□□ 1.36
TUBE1-208ENST00000604743 WDR7Q9Y4E6 1490 aa23.55■■□□□ 1.36
TUBE1-208ENST00000604743 GLI2P10070 1586 aa23.54■■□□□ 1.36
TUBE1-208ENST00000604743 KCNH8Q96L42 1107 aa23.54■■□□□ 1.36
TUBE1-208ENST00000604743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.53■■□□□ 1.36
TUBE1-208ENST00000604743 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
TUBE1-208ENST00000604743 ATP10BO94823 1461 aa23.52■■□□□ 1.36
TUBE1-208ENST00000604743 ARHGAP35Q9NRY4 1499 aa23.49■■□□□ 1.35
TUBE1-208ENST00000604743 NUP153P49790 1475 aaKnown RBP23.47■■□□□ 1.35
TUBE1-208ENST00000604743 PPRC1Q5VV67 1664 aaKnown RBP23.47■■□□□ 1.35
TUBE1-208ENST00000604743 MAP3K4Q9Y6R4 1608 aa23.46■■□□□ 1.35
TUBE1-208ENST00000604743 ATP1B4Q9UN42 357 aaPredicted RBP23.44■■□□□ 1.34
TUBE1-208ENST00000604743 KDM6BO15054 1643 aa23.43■■□□□ 1.34
TUBE1-208ENST00000604743 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
TUBE1-208ENST00000604743 CFAP43Q8NDM7 1665 aa23.38■■□□□ 1.33
TUBE1-208ENST00000604743 CD109Q6YHK3 1445 aa23.37■■□□□ 1.33
TUBE1-208ENST00000604743 TEX14Q8IWB6 1497 aa23.35■■□□□ 1.33
TUBE1-208ENST00000604743 PLEKHD1A6NEE1 506 aa23.34■■□□□ 1.33
TUBE1-208ENST00000604743 CDK13Q14004 1512 aaKnown RBP23.33■■□□□ 1.33
TUBE1-208ENST00000604743 HECW1Q76N89 1606 aa23.33■■□□□ 1.32
TUBE1-208ENST00000604743 CLIP1P30622 1438 aa23.33■■□□□ 1.32
TUBE1-208ENST00000604743 ABCA9Q8IUA7 1624 aa23.29■■□□□ 1.32
TUBE1-208ENST00000604743 MAGI3Q5TCQ9 1506 aa23.28■■□□□ 1.32
TUBE1-208ENST00000604743 LOC105371045A0A1W2PR82 267 aa23.26■■□□□ 1.31
TUBE1-208ENST00000604743 LRRIQ1Q96JM4 1722 aa23.25■■□□□ 1.31
TUBE1-208ENST00000604743 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
TUBE1-208ENST00000604743 PCF11O94913 1555 aaKnown RBP23.24■■□□□ 1.31
TUBE1-208ENST00000604743 CASKIN1Q8WXD9 1431 aa23.2■■□□□ 1.3
TUBE1-208ENST00000604743 CDK11AQ9UQ88 783 aaPredicted RBP23.2■■□□□ 1.3
TUBE1-208ENST00000604743 CEP162Q5TB80 1403 aa23.18■■□□□ 1.3
TUBE1-208ENST00000604743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.18■■□□□ 1.3
TUBE1-208ENST00000604743 TTC37Q6PGP7 1564 aa23.16■■□□□ 1.3
TUBE1-208ENST00000604743 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
TUBE1-208ENST00000604743 CCDC18Q5T9S5 1454 aa23.11■■□□□ 1.29
TUBE1-208ENST00000604743 TROQ12816 1431 aaPredicted RBP23.1■■□□□ 1.29
TUBE1-208ENST00000604743 KIF14Q15058 1648 aa23.1■■□□□ 1.29
TUBE1-208ENST00000604743 AEBP2Q6ZN18 517 aaPredicted RBP23.09■■□□□ 1.29
TUBE1-208ENST00000604743 NEO1Q92859 1461 aa23.09■■□□□ 1.29
TUBE1-208ENST00000604743 ARAP3Q8WWN8 1544 aa23.08■■□□□ 1.29
TUBE1-208ENST00000604743 PHLDB1Q86UU1 1377 aa23.07■■□□□ 1.28
TUBE1-208ENST00000604743 FANCAO15360 1455 aa23.05■■□□□ 1.28
TUBE1-208ENST00000604743 MYO5CQ9NQX4 1742 aa23.05■■□□□ 1.28
TUBE1-208ENST00000604743 RAPGEF3O95398 923 aa23.04■■□□□ 1.28
TUBE1-208ENST00000604743 CFAP74Q9C0B2 1584 aa23.03■■□□□ 1.28
TUBE1-208ENST00000604743 AKNAQ7Z591 1439 aa23.03■■□□□ 1.28
TUBE1-208ENST00000604743 PLCH2O75038 1416 aa23.01■■□□□ 1.27
TUBE1-208ENST00000604743 DENND4BO75064 1496 aaPredicted RBP22.97■■□□□ 1.27
TUBE1-208ENST00000604743 EFCAB2Q5VUJ9 269 aa22.96■■□□□ 1.27
TUBE1-208ENST00000604743 ARHGAP5Q13017 1502 aa22.96■■□□□ 1.27
TUBE1-208ENST00000604743 KDM4FA0A1W2PPD8 638 aa22.95■■□□□ 1.26
TUBE1-208ENST00000604743 FRMPD1Q5SYB0 1578 aa22.95■■□□□ 1.26
TUBE1-208ENST00000604743 CDC42BPBQ9Y5S2 1711 aa22.94■■□□□ 1.26
TUBE1-208ENST00000604743 RICTORQ6R327 1708 aa22.94■■□□□ 1.26
TUBE1-208ENST00000604743 ADGRL1O94910 1474 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms